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lncRNA: ENSG00000223784 |
Summary for LINP1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000223784 | Gene symbol | LINP1 |
| Gene name | lncRNA in non-homologous end joining pathway 1 | |
| HGNC | 53170 | |
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | LINP1|RP11-554I8.2|10p14 | |
| UniProtAcc |
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Structure and expression level for LINP1 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000223784 | 3.933061e+02 | 4.571863e+00 | 1.012983e+00 | 4.513269e+00 | 6.380000e-06 | 3.590000e-05 | UP | CHOL |
| ENSG00000223784 | 9.786478e+01 | 3.614858e+00 | 1.701022e-01 | 2.125110e+01 | 3.220000e-100 | 4.900000e-98 | UP | KIRC |
| ENSG00000223784 | 7.340438e+01 | 2.038060e+00 | 6.615964e-01 | 3.080519e+00 | 2.066401e-03 | 7.085595e-03 | UP | BLCA |
| ENSG00000223784 | 1.370624e+02 | 4.011542e+00 | 2.880444e-01 | 1.392682e+01 | 4.350000e-44 | 9.200000e-42 | UP | KIRP |
| ENSG00000223784 | 1.098649e+02 | 3.054279e+00 | 8.606517e-01 | 3.548798e+00 | 3.869940e-04 | 3.746763e-03 | UP | ESCA |
| ENSG00000223784 | 6.419143e+01 | 4.185371e+00 | 3.543502e-01 | 1.181140e+01 | 3.410000e-32 | 4.050000e-31 | UP | LUSC |
| ENSG00000223784 | 5.409039e+01 | 4.221924e+00 | 3.942230e-01 | 1.070948e+01 | 9.190000e-27 | 1.470000e-25 | UP | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000223784 | 3.373765e-01 | 1.190518e-17 | KIRC | 6.824623e-17 |
| ENSG00000223784 | 3.879893e-01 | 6.303325e-12 | KIRP | 1.242365e-10 |
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lncRNA-Protein interaction for LINP1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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