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lncRNA: ENSG00000223573 |
Summary for TINCR |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000223573 | Gene symbol | TINCR |
| Gene name | ||
| HGNC | ||
| Entrez ID | 257000 | |
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for TINCR |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000223573 | 1.219607e+03 | 1.646515e+00 | 3.924207e-01 | 4.195790e+00 | 2.720000e-05 | 1.674980e-04 | UP | BLCA |
| ENSG00000223573 | 1.665842e+03 | 5.059870e+00 | 1.093685e+00 | 4.626442e+00 | 3.720000e-06 | 7.660000e-05 | UP | CESC |
| ENSG00000223573 | 4.329778e+02 | 4.432152e+00 | 1.119544e+00 | 3.958890e+00 | 7.530000e-05 | 1.433583e-03 | UP | PCPG |
| ENSG00000223573 | 1.144747e+03 | 1.180987e+00 | 2.124386e-01 | 5.559195e+00 | 2.710000e-08 | 8.360000e-08 | UP | LUSC |
| ENSG00000223573 | 1.041089e+03 | 2.589397e+00 | 1.762092e-01 | 1.469502e+01 | 6.940000e-49 | 1.420000e-47 | UP | BRCA |
| ENSG00000223573 | 1.845270e+02 | -1.974736e+00 | 2.505127e-01 | -7.882775e+00 | 3.200000e-15 | 2.300000e-14 | DOWN | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for TINCR |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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