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lncRNA: ENSG00000223396 |
Summary for RP11-134G8.5 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000223396 | Gene symbol | RP11-134G8.5 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | lincRNA | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP11-134G8.5 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000223396 | 1.293928e+02 | 4.639367e+00 | 5.585103e-01 | 8.306681e+00 | 9.840000e-17 | 2.260000e-14 | UP | PCPG |
| ENSG00000223396 | 1.417930e+02 | 1.130055e+00 | 1.078067e-01 | 1.048223e+01 | 1.040000e-25 | 1.560000e-24 | UP | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000223396 | 4.901034e-01 | 6.321712e-04 | CHOL | 1.194485e-03 |
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lncRNA-Protein interaction for RP11-134G8.5 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000223396 | ENST00000441932 | RP11-134G8.5 | ENSG00000198040 | ZNF84 | 44.87 | 90.3783 | P51523 | TF | NA |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000223396 | ENST00000441932 | RP11-134G8.5 | ENSG00000082898 | XPO1 | 69.91 | 90.4895 | O14980 | RBP | NA |
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