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lncRNA: ENSG00000214145 |
Summary for LINC00887 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000214145 | Gene symbol | LINC00887 |
| Gene name | long intergenic non-protein coding RNA 887 | |
| HGNC | 48574 | |
| Entrez ID | 100131551 | |
| Gene type | lincRNA | |
| Synonyms | 03q29|LINC00887 | |
| UniProtAcc |
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Structure and expression level for LINC00887 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000214145 | 2.187115e+03 | 5.580064e+00 | 1.839847e-01 | 3.032895e+01 | 4.760000e-202 | 1.300000e-198 | UP | KIRC |
| ENSG00000214145 | 2.155153e+02 | 3.454040e+00 | 2.921725e-01 | 1.182192e+01 | 3.010000e-32 | 2.470000e-30 | UP | KIRP |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000214145 | -3.095883e-01 | 6.146663e-03 | ACC | 1.756189e-02 |
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lncRNA-Protein interaction for LINC00887 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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