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lncRNA: ENSG00000204860 |
Summary for FAM201A |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000204860 | Gene symbol | FAM201A |
| Gene name | family with sequence similarity 201 member A | |
| HGNC | 27239 | |
| Entrez ID | ||
| Gene type | antisense | |
| Synonyms | 09p13.1|FAM201A | |
| UniProtAcc | Q5SY85 |
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Structure and expression level for FAM201A |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000204860 | 2.657785e+02 | 2.340071e+00 | 4.219346e-01 | 5.546051e+00 | 2.920000e-08 | 2.550000e-07 | UP | CHOL |
| ENSG00000204860 | 1.855186e+02 | 3.925531e+00 | 8.229119e-01 | 4.770294e+00 | 1.840000e-06 | 5.990000e-05 | UP | PCPG |
| ENSG00000204860 | 3.136250e+02 | 1.002880e+00 | 1.030425e-01 | 9.732687e+00 | 2.190000e-22 | 7.620000e-21 | UP | PRAD |
| ENSG00000204860 | 1.274300e+02 | 1.051708e+00 | 1.585591e-01 | 6.632912e+00 | 3.290000e-11 | 2.070000e-10 | UP | COAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000204860 | 6.084829e-01 | 9.233805e-06 | CHOL | 7.108270e-05 |
| ENSG00000204860 | 3.617211e-01 | 1.782698e-18 | PRAD | 3.099078e-17 |
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lncRNA-Protein interaction for FAM201A |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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