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lncRNA: ENSG00000203711 |
Summary for LINC02901 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000203711 | Gene symbol | LINC02901 |
| Gene name | long intergenic non-protein coding RNA 2901 | |
| HGNC | 21179 | |
| Entrez ID | 100130967 | |
| Gene type | lincRNA | |
| Synonyms | LINC02901|C6orf99|06q25.3 | |
| UniProtAcc | Q4VX62 |
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Structure and expression level for LINC02901 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000203711 | 2.490833e+01 | 2.617761e+00 | 2.033118e-01 | 1.287560e+01 | 6.180000e-38 | 3.370000e-36 | UP | UCEC |
| ENSG00000203711 | 7.195435e+01 | 2.676887e+00 | 1.137448e-01 | 2.353415e+01 | 1.820000e-122 | 2.800000e-120 | UP | BRCA |
| ENSG00000203711 | 4.118336e+01 | 1.092144e+00 | 1.540649e-01 | 7.088854e+00 | 1.350000e-12 | 7.840000e-12 | UP | LUAD |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000203711 | 3.072312e-01 | 7.280560e-28 | BRCA | 5.125514e-25 |
| ENSG00000203711 | 3.523515e-01 | 1.338433e-18 | UCEC | 4.422647e-17 |
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lncRNA-Protein interaction for LINC02901 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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