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lncRNA: ENSG00000203644 |
Summary for RP11-332M2.1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000203644 | Gene symbol | RP11-332M2.1 |
| Gene name | ||
| HGNC | ||
| Entrez ID | ||
| Gene type | sense_intronic | |
| Synonyms | ||
| UniProtAcc |
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Structure and expression level for RP11-332M2.1 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000203644 | 2.079935e+02 | 1.516191e+00 | 2.900287e-01 | 5.227729e+00 | 1.720000e-07 | 1.680000e-06 | UP | GBM |
| ENSG00000203644 | 3.453581e+02 | 1.112389e+00 | 1.322804e-01 | 8.409323e+00 | 4.120000e-17 | 5.260000e-16 | UP | UCEC |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000203644 | 3.456708e-01 | 2.003019e-02 | CHOL | 2.179223e-02 |
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lncRNA-Protein interaction for RP11-332M2.1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000203644 | ENST00000366451 | RP11-332M2.1 | ENSG00000114166 | KAT2B | 95.94 | 90.2135 | Q92831 | Epi | NA |
| ENSG00000203644 | ENST00000366451 | RP11-332M2.1 | ENSG00000115524 | SF3B1 | 64.74 | 90.7262 | O75533 | Epi | NA |
| ENSG00000203644 | ENST00000366451 | RP11-332M2.1 | ENSG00000096968 | JAK2 | 91.28 | 90.4763 | O60674 | Epi | NA |
| ENSG00000203644 | ENST00000366451 | RP11-332M2.1 | ENSG00000175054 | ATR | 90.98 | 92.4724 | Q13535 | Epi | NA |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000203644 | ENST00000366451 | RP11-332M2.1 | ENSG00000114127 | XRN1 | 81.65 | 91.9371 | Q8IZH2 | RBP | NA |
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