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lncRNA: ENSG00000197308 |
Summary for GATA3-AS1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000197308 | Gene symbol | GATA3-AS1 |
| Gene name | GATA3 antisense RNA 1 | |
| HGNC | 33786 | |
| Entrez ID | 399717 | |
| Gene type | lincRNA | |
| Synonyms | 10p14|GATA3-AS1 | |
| UniProtAcc |
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Structure and expression level for GATA3-AS1 |
| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000197308 | 2.446220e+02 | -1.588803e+00 | 5.210775e-01 | -3.049073e+00 | 2.295487e-03 | 5.185265e-03 | DOWN | KICH |
| ENSG00000197308 | 5.548782e+02 | 5.045616e+00 | 6.219797e-01 | 8.112187e+00 | 4.970000e-16 | 1.060000e-13 | UP | PCPG |
| ENSG00000197308 | 5.976017e+02 | 2.565166e+00 | 1.972796e-01 | 1.300269e+01 | 1.180000e-38 | 1.680000e-37 | UP | BRCA |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
| ENSG00000197308 | -6.320613e-01 | 3.078834e-11 | KICH | 5.064368e-10 |
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lncRNA-Protein interaction for GATA3-AS1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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