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lncRNA: ENSG00000189223 |
Summary for PAX8-AS1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000189223 | Gene symbol | PAX8-AS1 |
| Gene name | PAX8 antisense RNA 1 | |
| HGNC | 49271 | |
| Entrez ID | 654433 | |
| Gene type | processed_transcript | |
| Synonyms | PAX8-AS1|02q14.1 | |
| UniProtAcc |
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Structure and expression level for PAX8-AS1 |
| AS events and RNA A-to-I editing events of lncRNA in TCGA based on Genvode V22 structure. |
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| Differentially expressed gene analysis between cancer and normal samples. |
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| Ensembl ID | Base mean | log2FC(AD/control) | lfcSE | Stat | P-value | Adjc.p-value | DEG direction | Cancer type |
| ENSG00000189223 | 1.510943e+03 | 2.850126e+00 | 6.650703e-01 | 4.285451e+00 | 1.820000e-05 | 9.390000e-05 | UP | CHOL |
| Correlation between lncRNAs and cancer stages. |
| LncRNA Ensembl ID | Correlation | P-value | Cancer Type | Adjc.p-value |
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lncRNA-Protein interaction for PAX8-AS1 |
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| lncRNA-epigenetic factor interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| lncRNA-transcript factor interaction (#cancer types with positive correlation >= 5). |
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| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
| ENSG00000189223 | ENST00000437551 | PAX8-AS1 | ENSG00000125618 | PAX8 | 4.1 | 90.1066 | Q06710 | TF | NA |
| lncRNA-RNA binding protein interaction (#cancer types with positive correlation >= 5). |
| LncRNA Ensembl ID | LncRNA ENST ID | LncRNA Name | Protein Ensembl ID | Protein Name | CatRAPID Score | Lncpro Score | UniPortID | Gene Subtype | Public source |
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