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Center for Computational Systems Medicine
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Gene summary

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Gene structure and Gene expression level

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Sex-biased somatic mutation

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DNA methylation with beta values in gene

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Exon skipping events with PSI in TCGA

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RNA A-to-I editing events in TCGA

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Sex-biased TF-Gene network of gene

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Sex-biased RBP-ES network of gene

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Sex-biased CeRNA regulation of gene

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Sex-biased eQTL regulation of gene

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Sex-biased eQTM regulation of gene

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Sex-biased sQTL regulation of gene

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Sex-biased sQTM regulation of gene

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Related disease information of gene

Gene: ENSG00000214510

Summary for SPINK13

check button Gene summary

Gene informationEnsembl ID

ENSG00000214510

Gene symbol

SPINK13

Gene nameserine peptidase inhibitor Kazal type 13
HGNC

27200

Entrez ID

153218

Gene typeprotein_coding
SynonymsSPINK13|SPINK5L3|LiESP6|HESPINTOR|MGC149260
UniProtAcc

Q1W4C9


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

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Structure and expression level for SPINK13

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
SPINK136.11e+01-1.02e+002.35e-01-4.35e+001.33e-051.73e-04KIRP

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
SPINK139.95e+012.24e+006.43e-013.49e+004.84e-042.90e-03KIRP

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Sex-biased somatic mutation for SPINK13

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

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DNA methylation with beta values for SPINK13

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
BRCAcg01391299chr5:148268749CGI:chr5:148383720-148384103UTR,promoter,exon,gene body4.50e-013.36e-012.02e+004.30e-024.72e-021.14e-01
KIRCcg10598168chr5:148268392CGI:chr5:148383720-148384103UTR,promoter,exon,gene body7.95e-016.73e-014.73e+002.29e-061.71e-051.23e-01
ACCcg10598168chr5:148268392CGI:chr5:148383720-148384103UTR,promoter,exon,gene body6.30e-017.50e-01-2.08e+003.77e-024.49e-02-1.20e-01

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
KIRCcg01907761chr5:148268246CGI:chr5:148383720-148384103UTR,promoter,exon,gene body3.41e-016.98e-01-3.48e+005.03e-048.46e-04-3.57e-01
KIRCcg02292949chr5:148268929CGI:chr5:148383720-148384103promoter,gene body6.98e-018.68e-01-4.02e+005.78e-051.26e-04-1.70e-01
COADcg01907761chr5:148268246CGI:chr5:148383720-148384103UTR,promoter,exon,gene body4.76e-018.28e-01-2.32e+002.05e-022.52e-02-3.52e-01
BLCAcg02292949chr5:148268929CGI:chr5:148383720-148384103promoter,gene body7.55e-018.87e-01-2.70e+006.88e-031.05e-02-1.32e-01
LIHCcg01907761chr5:148268246CGI:chr5:148383720-148384103UTR,promoter,exon,gene body5.31e-017.38e-012.41e+001.62e-021.86e-02-2.07e-01
KIRPcg01391299chr5:148268749CGI:chr5:148383720-148384103UTR,promoter,exon,gene body2.90e-013.93e-01-3.74e+001.86e-044.39e-04-1.03e-01
CHOLcg01907761chr5:148268246CGI:chr5:148383720-148384103UTR,promoter,exon,gene body4.23e-016.28e-01-2.29e+002.23e-023.24e-02-2.05e-01
CHOLcg01391299chr5:148268749CGI:chr5:148383720-148384103UTR,promoter,exon,gene body3.86e-017.32e-01-3.54e+004.02e-048.32e-03-3.46e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
LUADcg01391299chr5:148268749CGI:chr5:148383720-148384103UTR,promoter,exon,gene body4.19e-015.25e-01-3.23e+001.25e-033.70e-03-1.06e-01
HNSCcg02292949chr5:148268929CGI:chr5:148383720-148384103promoter,gene body7.68e-018.75e-01-2.39e+001.70e-022.50e-02-1.07e-01
BLCAcg01391299chr5:148268749CGI:chr5:148383720-148384103UTR,promoter,exon,gene body3.61e-015.00e-01-2.70e+006.94e-031.39e-02-1.38e-01

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Exon skipping events with PSI in TCGA for SPINK13

∗Please access ExonSkipDB for exon skipping annotation.
check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

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RNA A-to-I editing events in TCGA for SPINK13

∗Please access CAeditome for RNA editing annotation.
check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

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Sex-biased TF-Gene network for SPINK13

check buttonTFs related to SPINK13.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
TF Gene
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
ACCZNF418SPINK134.76e+009.81e-014.06e+001.55e-02Male-biased
CHOLZNF418SPINK134.25e+007.85e-035.25e+009.90e-01Female-biased
DLBCZNF418SPINK134.91e+009.89e-013.96e+007.04e-03Male-biased
DLBCZNF79SPINK134.95e+009.86e-014.10e+001.05e-02Male-biased
ESCAZNF71SPINK134.68e+009.86e-013.96e+009.89e-03Male-biased
GBMFOXA1SPINK135.49e+009.82e-014.55e+001.65e-02Male-biased
GBMFOXA3SPINK135.67e+009.80e-014.77e+001.87e-02Male-biased
GBMSTAT2SPINK134.55e+009.85e-013.40e+008.44e-03Male-biased
GBMZNF25SPINK135.59e+009.88e-014.51e+001.09e-02Male-biased
GBMZNF418SPINK135.38e+009.94e-013.99e+004.21e-03Male-biased
GBMZNF79SPINK135.40e+009.93e-014.07e+005.00e-03Male-biased
MESOFOXA1SPINK135.09e+009.96e-013.36e+001.77e-03Male-biased
MESOFOXA3SPINK135.25e+009.96e-013.58e+002.24e-03Male-biased
MESOFOXC1SPINK135.40e+009.86e-014.25e+001.24e-02Male-biased
MESOFOXC2SPINK134.51e+009.90e-012.97e+003.31e-03Male-biased
MESOFOXF1SPINK135.30e+009.90e-014.00e+007.62e-03Male-biased
MESOFOXP2SPINK135.17e+009.87e-013.97e+001.07e-02Male-biased
MESOFOXQ1SPINK135.48e+009.93e-014.04e+004.93e-03Male-biased
MESOHNF1BSPINK136.01e+009.80e-014.99e+001.88e-02Male-biased
MESOONECUT3SPINK135.78e+009.85e-014.66e+001.37e-02Male-biased
MESOPOU6F2SPINK135.99e+009.88e-014.80e+001.13e-02Male-biased
MESOSTAT2SPINK133.96e+009.82e-012.40e+002.88e-03Male-biased
MESOTEAD3SPINK135.44e+009.81e-014.41e+001.76e-02Male-biased
MESOZKSCAN2SPINK135.40e+009.94e-013.92e+004.32e-03Male-biased
MESOZNF25SPINK135.21e+009.97e-013.32e+009.86e-04Male-biased
MESOZNF418SPINK134.71e+009.95e-012.07e+006.56e-05Male-biased
MESOZNF79SPINK134.87e+009.96e-012.90e+007.14e-04Male-biased
READZNF418SPINK135.83e+009.90e-015.00e+009.42e-03Male-biased

check buttonSPINK13 related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

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Sex-biased RBP-ES network for SPINK13

check buttonRBPs related to ES in SPINK13.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType

check buttonSPINK13 related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

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Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

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Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs17287002chr5:141651073:C:T-0.0938489254785820.00604306959854218KIRCFemale-baised eQTL
rs61749636chr5:141654303:T:G-0.0938489254785820.00604306959854218KIRCFemale-baised eQTL
rs4912750chr5:141406877:A:T-0.08367083549574440.0138195646643749KIRCFemale-baised eQTL
rs153664chr5:142431728:A:G--0.05682188661497370.0212658832424815KIRCFemale-baised eQTL
rs17286989chr5:141647245:A:C-0.0823863743993020.0219242538830445KIRCFemale-baised eQTL
rs62380760chr5:141604887:G:A-0.08004722943853340.0232815391184942KIRCFemale-baised eQTL
rs12522883chr5:157096393:G:A-0.05841410395244660.0270727569666782LUADFemale-baised eQTL
rs180757903chr5:157096967:T:C-0.05841410395244660.0270727569666782LUADFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs12109403chr5:151608144:G:A-0.06185857211801920.00303027764207897KIRCMale-baised eQTL
rs6886059chr5:142888049:G:A-0.05040308537473210.00609299175788227KIRCMale-baised eQTL
rs6892654chr5:142889491:G:A-0.05310118915072710.00729741051802167KIRCMale-baised eQTL
rs6886351chr5:142886004:A:G-0.05303665037234750.00746999860447839KIRCMale-baised eQTL
rs6879670chr5:149842592:C:T-0.0529721428593110.0252672072218362KIRCMale-baised eQTL
rs10073108chr5:148850014:T:C-0.04329712186787180.029764474956512KIRCMale-baised eQTL
rs75053155chr5:153615312:T:A-0.03650932753546970.0371415291725893KIRCMale-baised eQTL
rs923183chr5:145227119:A:G-0.05315786826667080.0481496810175737KIRCMale-baised eQTL
rs57813050chr5:143484607:A:C-0.07453091743818385.73679858088423e-05LUADMale-baised eQTL
rs248508chr5:141828779:A:G--0.08589523568218050.000133606104703436LUADMale-baised eQTL
rs248506chr5:141829289:A:G--0.08589523568218050.000133606104703436LUADMale-baised eQTL
rs10463359chr5:143487727:T:G-0.06861439762329560.000221818587670034LUADMale-baised eQTL
rs6880439chr5:143488847:C:T-0.06733535887251130.000308433589549671LUADMale-baised eQTL
rs17100350chr5:143489971:C:T-0.06733535887251130.000308433589549671LUADMale-baised eQTL
rs921017chr5:143491250:C:T-0.06736842028854610.00030965881634615LUADMale-baised eQTL
rs2028831chr5:143496286:G:A-0.06526221744514540.000482105279228014LUADMale-baised eQTL
rs248517chr5:141822328:A:C--0.07482261149268140.00107661295669184LUADMale-baised eQTL
rs171584chr5:141821966:C:G--0.07286278181734450.0012791453256053LUADMale-baised eQTL
rs173570chr5:141818466:G:A--0.07112427002256270.00175570466937782LUADMale-baised eQTL
rs123146chr5:141825114:G:C--0.06986522810673810.00254095291996394LUADMale-baised eQTL
rs57393241chr5:142158692:C:T-0.059690526582970.00356172150705162LUADMale-baised eQTL
rs4705384chr5:149812603:T:C-0.07251988016540950.00500222205523103LUADMale-baised eQTL
rs76390604chr5:149818046:T:C-0.07041358606948630.0067893692032277LUADMale-baised eQTL
rs10491360chr5:149818252:T:C-0.07041358606948630.0067893692032277LUADMale-baised eQTL
rs1368359chr5:142749325:A:G-0.06917549797200050.00731888579312287LUADMale-baised eQTL
rs7732571chr5:142141204:C:G-0.05443645926778370.00895032290361484LUADMale-baised eQTL
rs2043281chr5:142143290:A:G-0.05443645926778370.00895032290361484LUADMale-baised eQTL
rs3850577chr5:142147398:C:T-0.05443645926778370.00895032290361484LUADMale-baised eQTL
rs3911911chr5:142147632:C:T-0.05443645926778370.00895032290361484LUADMale-baised eQTL
rs58625131chr5:142158500:T:G-0.05430266650806390.00935196605218688LUADMale-baised eQTL
rs116557chr5:141823794:G:T--0.06082767448030880.0100949632210348LUADMale-baised eQTL
rs17100330chr5:143486999:C:T-0.06641976874418090.0102986092113649LUADMale-baised eQTL
rs80301208chr5:143485492:A:G-0.0663942058848190.0104128439126258LUADMale-baised eQTL
rs1123825chr5:144437293:A:G-0.08443865298792790.0113882271279925LUADMale-baised eQTL
rs6580231chr5:142150581:C:A-0.05247255898739090.011874367860787LUADMale-baised eQTL
rs17100322chr5:143481699:A:G-0.06467625986316230.0132093510753818LUADMale-baised eQTL
rs17100326chr5:143483391:C:T-0.06467625986316230.0132093510753818LUADMale-baised eQTL
rs7733001chr5:142136203:G:A-0.0517395191160160.013439267402147LUADMale-baised eQTL
rs112028479chr5:142141248:T:C-0.0517395191160160.013439267402147LUADMale-baised eQTL
rs112324272chr5:142141421:C:G-0.0517395191160160.013439267402147LUADMale-baised eQTL
rs3850576chr5:142144467:T:C-0.0517395191160160.013439267402147LUADMale-baised eQTL
rs7725919chr5:142146608:C:A-0.0517395191160160.013439267402147LUADMale-baised eQTL
rs2906084chr5:142161591:G:A--0.0516110813543110.0139954617705587LUADMale-baised eQTL
rs55872445chr5:142158691:G:T-0.0516110813543110.0139954617705587LUADMale-baised eQTL
rs7721458chr5:143483675:C:A-0.06306160568928320.016448447522319LUADMale-baised eQTL
rs7727031chr5:147876357:T:C-0.05450895029943510.0364096673664487LUADMale-baised eQTL
rs13185299chr5:142146055:A:G-0.04544704672649420.0368024212908671LUADMale-baised eQTL
rs17098069chr5:142119870:G:A-0.04549889060580750.0382949712881709LUADMale-baised eQTL
rs62394188chr5:145600299:G:A-0.06298598526449710.0394763411623754LUADMale-baised eQTL
rs62394211chr5:145615940:C:T-0.0610640481391780.0484615306094949LUADMale-baised eQTL
rs79155448chr5:145616241:G:A-0.0610640481391780.0484615306094949LUADMale-baised eQTL
rs1821267chr5:145616474:G:A-0.0610640481391780.0484615306094949LUADMale-baised eQTL
rs1821269chr5:145616626:G:A-0.0610640481391780.0484615306094949LUADMale-baised eQTL
rs7449247chr5:145616683:C:A-0.0610640481391780.0484615306094949LUADMale-baised eQTL
rs1835973chr5:145617129:T:C-0.0610640481391780.0484615306094949LUADMale-baised eQTL
rs1835974chr5:145617157:A:T-0.0610640481391780.0484615306094949LUADMale-baised eQTL
rs62394217chr5:145618341:C:T-0.0610640481391780.0484615306094949LUADMale-baised eQTL
rs1897582chr5:145622554:A:T-0.0610640481391780.0484615306094949LUADMale-baised eQTL
rs6863005chr5:145623370:C:A-0.0610640481391780.0484615306094949LUADMale-baised eQTL
rs4579305chr5:145623606:C:T-0.0610640481391780.0484615306094949LUADMale-baised eQTL
rs1433035chr5:145623961:G:T-0.0610640481391780.0484615306094949LUADMale-baised eQTL
rs62394224chr5:145625309:A:G-0.0610640481391780.0484615306094949LUADMale-baised eQTL
rs77839581chr5:145626465:C:T-0.0610640481391780.0484615306094949LUADMale-baised eQTL
rs1865007chr5:145629104:C:G-0.06102909080215250.0486310441529182LUADMale-baised eQTL
rs62392261chr5:145631972:A:G-0.06099778423707720.0489941059904845LUADMale-baised eQTL
rs4339405chr5:145623691:C:T-0.06100090911057950.0491682373510747LUADMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

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Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription
eQTM boxplot analysisGene ID: ENSG00000214510
CpG Site: cg10598168
Position to Gene: gene,exon,promoter,UTR
Male Effect: -0.488652545281816
Female Effect: -

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type
cg10598168chr5:148268392gene,exon,promoter,UTR-0.4886525452818169.62887077689688e-58-0.84305368418838361.8838881186107818e-61LUAD

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

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Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

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Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

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Related disease information of SPINK13

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource