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Gene: ENSG00000198830 |
Summary for HMGN2 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000198830 | Gene symbol | HMGN2 |
| Gene name | high mobility group nucleosomal binding domain 2 | |
| HGNC | 4986 | |
| Entrez ID | 3151 | |
| Gene type | protein_coding | |
| Synonyms | HMGN2| | |
| UniProtAcc | P05204 |
| Drugs associated with this gene(DrugBank). |
| Gene ID | Gene Symbol | Drug ID | Drug Name | Drug Type |
| Cancer therapeutic drugs associated with this gene(NCI). |
| Gene ID | Gene Name | Drug ID | Drug Name | Drug Type | Cancer |
Top |
Structure and expression level for HMGN2 |
| AS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure. ∗For more information on exon skipping events please check the ExonskipDB database. ∗For more information on exon skipping events please check the CAeditome database. |
 |
| Landscape of gene expressions across multiple cancer types. |
 |
| Differentially expressed gene analysis between tumor male and tumor female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| Differentially expressed gene analysis between tumor male and normal male samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| Differentially expressed gene analysis between tumor female and normal female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
Top |
Sex-biased somatic mutation for HMGN2 |
| ∗For more information on exon skipping events please check the ExonskipDB database. |
| Gene ID | Cancer Type | Hugo Symbol | Male | Female | pval | or | ci.up | ci.low | adjPval |
Top |
DNA methylation with beta values for HMGN2 |
| Landscape of DNA methylation across multiple cancer types. |
 |
| Differentially expressed CpG sites between male tumor and female tumor patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| BRCA | cg05304531 | chr1:26471085 | CGI:chr1:26471875-26473351 | promoter | 2.78e-01 | 1.76e-01 | 2.77e+00 | 5.55e-03 | 2.13e-02 | 1.03e-01 |
| BRCA | cg26108329 | chr1:26471094 | CGI:chr1:26471875-26473351 | promoter | 3.92e-01 | 2.87e-01 | 2.96e+00 | 3.10e-03 | 1.67e-02 | 1.05e-01 |
| Differentially expressed CpG sites between male tumor and male normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| KIRC | cg27425314 | chr1:26471128 | CGI:chr1:26471875-26473351 | promoter | 2.14e-01 | 4.15e-01 | -4.00e+00 | 6.45e-05 | 1.39e-04 | -2.00e-01 |
| KIRC | cg26108329 | chr1:26471094 | CGI:chr1:26471875-26473351 | promoter | 5.87e-01 | 6.89e-01 | -3.96e+00 | 7.53e-05 | 1.59e-04 | -1.02e-01 |
| LUSC | cg05304531 | chr1:26471085 | CGI:chr1:26471875-26473351 | promoter | 3.20e-01 | 5.57e-01 | -4.18e+00 | 2.88e-05 | 5.26e-04 | -2.37e-01 |
| LUSC | cg27425314 | chr1:26471128 | CGI:chr1:26471875-26473351 | promoter | 8.54e-02 | 2.84e-01 | -4.22e+00 | 2.49e-05 | 5.26e-04 | -1.98e-01 |
| LUSC | cg26108329 | chr1:26471094 | CGI:chr1:26471875-26473351 | promoter | 4.31e-01 | 6.28e-01 | -4.30e+00 | 1.70e-05 | 5.26e-04 | -1.97e-01 |
| BLCA | cg27425314 | chr1:26471128 | CGI:chr1:26471875-26473351 | promoter | 6.32e-02 | 1.73e-01 | -4.54e+00 | 5.74e-06 | 7.57e-05 | -1.10e-01 |
| KIRP | cg27425314 | chr1:26471128 | CGI:chr1:26471875-26473351 | promoter | 4.22e-01 | 2.66e-01 | 2.10e+00 | 3.53e-02 | 3.72e-02 | 1.56e-01 |
| CHOL | cg27425314 | chr1:26471128 | CGI:chr1:26471875-26473351 | promoter | 3.01e-01 | 7.07e-01 | -2.06e+00 | 3.90e-02 | 4.26e-02 | -4.06e-01 |
| Differentially expressed CpG sites between female tumor and female normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| BRCA | cg05304531 | chr1:26471085 | CGI:chr1:26471875-26473351 | promoter | 2.78e-01 | 3.84e-01 | -8.64e+00 | 5.60e-18 | 2.57e-17 | -1.06e-01 |
| BRCA | cg26108329 | chr1:26471094 | CGI:chr1:26471875-26473351 | promoter | 3.92e-01 | 5.11e-01 | -1.08e+01 | 3.50e-27 | 3.69e-26 | -1.19e-01 |
| HNSC | cg19621076 | chr1:26473584 | CGI:chr1:26471875-26473351 | promoter,exon,gene body | 2.53e-01 | 1.28e-01 | 2.65e+00 | 8.13e-03 | 1.67e-02 | 1.25e-01 |
Top |
Exon skipping events with PSI in TCGA for HMGN2 |
| ∗Please access ExonSkipDB for exon skipping annotation. |
| Landscape of exon skipping events across multiple cancer types. |
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| Differentially expressed exon skipping events between male tumor and female tumor patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
| Differentially expressed exon skipping events between male tumor and male normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
| Differentially expressed exon skipping events between female tumor and female normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
Top |
RNA A-to-I editing events in TCGA for HMGN2 |
| ∗Please access CAeditome for RNA editing annotation. |
| Differentially expressed RNA editing events between male tumor and female tumor patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| Differentially expressed RNA editing events between male tumor and male normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| Differentially expressed RNA editing events between female tumor and female normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| Protein coding RNA editing(s). |
| Editing Position | Variant Type | Gene Symbol | Transcript ID | NTchange | AAchange |
Top |
Sex-biased TF-Gene network for HMGN2 |
| TFs related to HMGN2. ∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
 |
| Cancer Type | TF | Target Gene | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| SKCM | POU3F3 | HMGN2 | 3.30e+00 | 5.22e-03 | 4.48e+00 | 9.81e-01 | Female-biased |
| SKCM | ZNF334 | HMGN2 | 3.06e+00 | 2.85e-03 | 4.43e+00 | 9.82e-01 | Female-biased |
| HMGN2 related gene. ∗Only the gene encode TF might with this result. ∗For more information please check Sex-biased TF-Coding gene network. |
Top |
Sex-biased RBP-ES network for HMGN2 |
| RBPs related to ES in HMGN2. ∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
 |
| Cancer Type | RBP | Target ES | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| UVM | KHDRBS3 | exon_skip_2914 | 8.12e+00 | 2.47e-03 | 8.54e+00 | 9.91e-01 | Female-biased |
| UVM | SRSF7 | exon_skip_2914 | 8.54e+00 | 2.56e-03 | 8.96e+00 | 9.93e-01 | Female-biased |
| READ | SRSF7 | exon_skip_2914 | 8.70e+00 | 5.10e-03 | 9.09e+00 | 9.91e-01 | Female-biased |
| MESO | KHDRBS3 | exon_skip_2914 | 8.05e+00 | 1.00e-02 | 8.40e+00 | 9.83e-01 | Female-biased |
| PAAD | PABPC5 | exon_skip_2930 | 9.11e+00 | 1.09e-02 | 9.41e+00 | 9.86e-01 | Female-biased |
| HMGN2 related ES. ∗Only the gene encode RBP might with this result. ∗For more information please check Sex-biased RBP-ES network in cancer. |
Top |
Sex-biased CeRNA regulation of gene |
| Sex-biased CeRNA regulation of gene. |
| Gene ID | ceRNA(lncRNA-miRNA-mRNA) | Group | Cancer Type |
Top |
Sex-biased eQTL regulation of gene |
| Sex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| eQTL | Description |
| Male-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs17427572 | chr1:21961373:C:T | - | 0.158064637293438 | 0.0299985287289612 | PAAD | Female-baised eQTL |
| rs75486949 | chr1:17610952:T:G | - | 0.111255263257509 | 0.00421173228078481 | BLCA | Female-baised eQTL |
| rs77166202 | chr1:17617108:G:A | - | 0.0928897992289476 | 0.0260420680072844 | BLCA | Female-baised eQTL |
| rs80223599 | chr1:17613866:A:C | - | 0.0964509419107661 | 0.0277116780582295 | BLCA | Female-baised eQTL |
| rs78012152 | chr1:17630944:G:C | - | 0.0902690103369828 | 0.0332312441372445 | BLCA | Female-baised eQTL |
| rs1557086 | chr1:21632639:T:C | - | -0.0792288570696469 | 0.0482294104349671 | BLCA | Female-baised eQTL |
| rs11586741 | chr1:22598290:C:T | - | 0.0620208530680951 | 0.028240385095351 | LUAD | Female-baised eQTL |
| rs4076925 | chr1:18786532:T:C | - | 0.045749654779742 | 0.0477428197148094 | LUAD | Female-baised eQTL |
| rs12124805 | chr1:26339577:T:C | - | 0.120840355752726 | 0.0229121829974648 | COAD | Female-baised eQTL |
| rs10902741 | chr1:26340318:A:G | - | 0.113723117414603 | 0.0400588282917704 | COAD | Female-baised eQTL |
| Female-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs2281030 | chr1:30231470:G:A | - | 0.0685990101439113 | 0.0304150547394446 | LIHC | Male-baised eQTL |
| rs1929304 | chr1:24495534:T:C | - | 0.0573124721618638 | 0.0141734181662204 | KIRC | Male-baised eQTL |
| rs12133164 | chr1:32556949:T:C | - | 0.0565201715025924 | 0.0204659046642605 | KIRC | Male-baised eQTL |
| rs143669010 | chr1:32565986:C:G | - | 0.0565201715025924 | 0.0204659046642605 | KIRC | Male-baised eQTL |
| rs28490395 | chr1:32567254:A:G | - | 0.0565201715025924 | 0.0204659046642605 | KIRC | Male-baised eQTL |
| rs55655845 | chr1:32570348:T:G | - | 0.0565201715025924 | 0.0204659046642605 | KIRC | Male-baised eQTL |
| rs10914578 | chr1:32571002:C:A | - | 0.0565201715025924 | 0.0204659046642605 | KIRC | Male-baised eQTL |
| rs113839457 | chr1:32573532:G:A | - | 0.0565201715025924 | 0.0204659046642605 | KIRC | Male-baised eQTL |
| rs12128448 | chr1:32541751:T:C | - | 0.0569584135314509 | 0.020953398698935 | KIRC | Male-baised eQTL |
| rs7527766 | chr1:32560296:T:C | - | 0.0569584135314509 | 0.020953398698935 | KIRC | Male-baised eQTL |
| rs12041245 | chr1:32560766:T:G | - | 0.0569584135314509 | 0.020953398698935 | KIRC | Male-baised eQTL |
| rs72652171 | chr1:32561229:G:C | - | 0.0569584135314509 | 0.020953398698935 | KIRC | Male-baised eQTL |
| rs72652175 | chr1:32563871:A:G | - | 0.0569584135314509 | 0.020953398698935 | KIRC | Male-baised eQTL |
| rs10914577 | chr1:32569275:G:A | - | 0.0569584135314509 | 0.020953398698935 | KIRC | Male-baised eQTL |
| rs12145456 | chr1:32574174:A:G | - | 0.0569584135314509 | 0.020953398698935 | KIRC | Male-baised eQTL |
| rs12122601 | chr1:32531530:A:T | - | 0.0569005182996661 | 0.0212378397329176 | KIRC | Male-baised eQTL |
| rs4970537 | chr1:32531923:C:T | - | 0.0569005182996661 | 0.0212378397329176 | KIRC | Male-baised eQTL |
| rs12034923 | chr1:32543709:T:C | - | 0.0560621232300339 | 0.0225232823290799 | KIRC | Male-baised eQTL |
| rs7516064 | chr1:32546658:T:G | - | 0.0560621232300339 | 0.0225232823290799 | KIRC | Male-baised eQTL |
| rs57273223 | chr1:32551152:T:C | - | 0.0560621232300339 | 0.0225232823290799 | KIRC | Male-baised eQTL |
| rs72652195 | chr1:32585089:G:A | - | 0.0568810894327071 | 0.0227788156882407 | KIRC | Male-baised eQTL |
| rs111704697 | chr1:32585102:C:T | - | 0.0568810894327071 | 0.0227788156882407 | KIRC | Male-baised eQTL |
| rs72652198 | chr1:32587307:G:A | - | 0.0568810894327071 | 0.0227788156882407 | KIRC | Male-baised eQTL |
| rs12124774 | chr1:32590067:G:A | - | 0.0568810894327071 | 0.0227788156882407 | KIRC | Male-baised eQTL |
| rs4970538 | chr1:32543418:A:C | - | 0.0565010392019838 | 0.0230353598592687 | KIRC | Male-baised eQTL |
| rs12133914 | chr1:32549680:G:T | - | 0.0565010392019838 | 0.0230353598592687 | KIRC | Male-baised eQTL |
| rs113128443 | chr1:32520790:A:G | - | 0.0560753782573277 | 0.0241389212984301 | KIRC | Male-baised eQTL |
| rs114648411 | chr1:32522991:T:C | - | 0.0560753782573277 | 0.0241389212984301 | KIRC | Male-baised eQTL |
| rs139592251 | chr1:32530951:C:T | - | 0.0565651474006297 | 0.0241955822599899 | KIRC | Male-baised eQTL |
| rs12030897 | chr1:18836965:G:A | - | 0.0819917239241248 | 0.0242564763670784 | KIRC | Male-baised eQTL |
| rs4970529 | chr1:32526815:C:T | - | 0.055998128000258 | 0.0244409450813741 | KIRC | Male-baised eQTL |
| rs28501117 | chr1:32520234:A:G | - | 0.0559191850405808 | 0.0246545597531003 | KIRC | Male-baised eQTL |
| rs111453410 | chr1:32592748:C:T | - | 0.0562142789456149 | 0.0263537415182859 | KIRC | Male-baised eQTL |
| rs10442622 | chr1:32527844:C:A | - | 0.0553411689212717 | 0.0264363370676909 | KIRC | Male-baised eQTL |
| rs6675186 | chr1:18827766:G:A | - | 0.0826295676354912 | 0.0270270412343331 | KIRC | Male-baised eQTL |
| rs192081021 | chr1:32581324:G:A | - | 0.0554941558281312 | 0.0271100159006839 | KIRC | Male-baised eQTL |
| rs12133233 | chr1:32536061:C:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs112002309 | chr1:32537683:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12126652 | chr1:32540702:A:G | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs72652133 | chr1:32540858:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12130958 | chr1:32541372:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12130985 | chr1:32541399:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12127598 | chr1:32541485:A:G | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12131078 | chr1:32541743:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs72652139 | chr1:32542271:C:T | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs7551056 | chr1:32542522:C:T | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs3938707 | chr1:32543146:T:C | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12129697 | chr1:32543229:A:G | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12140665 | chr1:32543304:C:T | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs143744476 | chr1:32543914:G:C | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs72652147 | chr1:32544905:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs7523628 | chr1:32546228:G:C | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs7515775 | chr1:32546351:T:C | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs7513429 | chr1:32546404:A:G | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs7513806 | chr1:32546800:A:T | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12131682 | chr1:32547200:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs114362018 | chr1:32547981:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs139106495 | chr1:32548002:C:G | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs7532773 | chr1:32548839:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12130349 | chr1:32548883:T:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs72652154 | chr1:32549168:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12133942 | chr1:32549727:G:T | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs7514359 | chr1:32550178:C:T | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs7526259 | chr1:32550470:A:T | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs143461021 | chr1:32550786:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs113582306 | chr1:32550861:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs72652158 | chr1:32550987:C:T | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs72652159 | chr1:32551044:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs72652160 | chr1:32551080:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs72652163 | chr1:32551283:T:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs7534760 | chr1:32552057:T:C | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs7542646 | chr1:32552135:G:C | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs4970531 | chr1:32552515:T:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs7547882 | chr1:32553084:A:G | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs115844090 | chr1:32553309:G:C | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12134736 | chr1:32553653:A:G | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12134788 | chr1:32553835:A:G | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12136580 | chr1:32555172:A:G | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs6692878 | chr1:32556104:C:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs7523019 | chr1:32556364:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs16835014 | chr1:32558250:A:G | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs6678025 | chr1:32558853:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs6678350 | chr1:32559173:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs55849423 | chr1:32565657:A:T | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12127859 | chr1:32575169:C:T | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs112063951 | chr1:32576610:A:G | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs113163842 | chr1:32579277:C:T | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs12119070 | chr1:32579958:G:A | - | 0.0554255085151736 | 0.0272544956755089 | KIRC | Male-baised eQTL |
| rs113618579 | chr1:32520957:G:A | - | 0.0557240870716434 | 0.0273903398081316 | KIRC | Male-baised eQTL |
| rs146670987 | chr1:32522758:T:C | - | 0.0557240870716434 | 0.0273903398081316 | KIRC | Male-baised eQTL |
| rs148978850 | chr1:32522879:C:T | - | 0.0557240870716434 | 0.0273903398081316 | KIRC | Male-baised eQTL |
| rs142596319 | chr1:32524531:G:A | - | 0.0556490282182985 | 0.0277037037079436 | KIRC | Male-baised eQTL |
| rs72652125 | chr1:32526479:T:G | - | 0.0556490282182985 | 0.0277037037079436 | KIRC | Male-baised eQTL |
| rs4970535 | chr1:32526667:G:A | - | 0.0556490282182985 | 0.0277037037079436 | KIRC | Male-baised eQTL |
| rs113780469 | chr1:32584542:G:A | - | 0.0552913842334321 | 0.0284383101490196 | KIRC | Male-baised eQTL |
| rs111464299 | chr1:32584546:T:C | - | 0.0552913842334321 | 0.0284383101490196 | KIRC | Male-baised eQTL |
| rs112292550 | chr1:32522590:C:T | - | 0.0553304731923681 | 0.0299242218986786 | KIRC | Male-baised eQTL |
| rs7547978 | chr1:32529031:G:T | - | 0.0549789133077499 | 0.0299802162744797 | KIRC | Male-baised eQTL |
| rs12064694 | chr1:24489380:G:A | - | 0.0561331228781936 | 0.0324037164778512 | KIRC | Male-baised eQTL |
| rs12118659 | chr1:32582313:A:G | - | 0.0541628290794978 | 0.0339091331343312 | KIRC | Male-baised eQTL |
| rs12141725 | chr1:32507670:G:A | - | 0.0539135331897697 | 0.0366395262005297 | KIRC | Male-baised eQTL |
| rs12121567 | chr1:32530606:A:G | - | 0.0528349928976201 | 0.0376770511128604 | KIRC | Male-baised eQTL |
| rs113953254 | chr1:32524243:A:G | - | 0.0520046030633941 | 0.0407305470124031 | KIRC | Male-baised eQTL |
| rs12726396 | chr1:21552441:T:C | - | 0.073298754985364 | 0.0196329735617928 | LUAD | Male-baised eQTL |
| rs1256334 | chr1:21565241:G:A | - | 0.0695538114528228 | 0.0212237349176908 | LUAD | Male-baised eQTL |
| rs1256338 | chr1:21562674:C:G | - | 0.0699907913117862 | 0.0277926382392355 | LUAD | Male-baised eQTL |
| rs1256343 | chr1:21548350:C:T | - | 0.0723595091934659 | 0.0299213309479929 | LUAD | Male-baised eQTL |
| rs1256323 | chr1:21524819:T:G | - | 0.070233504798159 | 0.0484551389439552 | LUAD | Male-baised eQTL |
| rs2235925 | chr1:17082746:G:A | - | -0.0575250293872502 | 0.00554831000935154 | COAD | Male-baised eQTL |
| rs72867082 | chr1:22236741:T:G | - | 0.102283202702656 | 0.0170714208695907 | COAD | Male-baised eQTL |
| rs7524118 | chr1:34270451:T:C | - | -0.0514669169074479 | 0.029295377112749 | COAD | Male-baised eQTL |
| rs72867093 | chr1:22242216:C:T | - | 0.0916305493473652 | 0.0336476387158654 | COAD | Male-baised eQTL |
| rs72868607 | chr1:22245742:C:T | - | 0.0913017732936912 | 0.0350328866720562 | COAD | Male-baised eQTL |
| rs61761362 | chr1:18831928:T:C | - | 0.055082938923861 | 0.0458013140848179 | COAD | Male-baised eQTL |
| Opposite sex-biased eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Sex-biased Gene in Cancer | Cancer Type |
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Sex-biased eQTM regulation of gene |
| Sex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table). |
| eQTM | Description |
 | Gene ID: ENSG00000198830 |
| CpG Site: cg26108329 | |
| Position to Gene: promoter | |
| Male Effect: - | |
| Female Effect: -0.408801162836264 |
| Male-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
| Female-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
| cg26108329 | chr1:26471094 | promoter | -0.408801162836264 | 3.74554353499218e-11 | -0.4612337179882206 | 7.74695046536794e-15 | LUAD |
| Opposite sex-biased eQTM regulation. |
| CpG Site | CpG Postion | CpG Island | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Male Cor | Male P-value | Female Cor | Female P-value | Sex-biased Coding Gene | Cancer Type |
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Sex-biased sQTL regulation of gene |
| Sex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTL | Description |
| Male-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
| Female-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
| Opposite sex-biased sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Male Effect | Male FDR | Female Effect | Female FDR | Cancer Type |
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Sex-biased sQTM regulation of gene |
| Sex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTM | Description |
| Male-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
| Female-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
| Opposite sex-biased sQTM regulation. |
| EX ID | EX Info | Skipped Exon | CPG Site | CPG Position | CPG Island | Position to EX Events | Male Effect | Male FDR | Female Effect | Female FDR | Male Correlation | Male P-value | Female Correlation | Female P-value | ORF_anno | Cancer Type |
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Related disease information of HMGN2 |
| Diseases associated with this gene (DisGeNET). |
| Gene ID | Gene Symbol | Disease ID | Disease Name | Number of PMID | Source |
