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Center for Computational Systems Medicine
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Gene summary

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Gene structure and Gene expression level

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Sex-biased somatic mutation

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DNA methylation with beta values in gene

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Exon skipping events with PSI in TCGA

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RNA A-to-I editing events in TCGA

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Sex-biased TF-Gene network of gene

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Sex-biased RBP-ES network of gene

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Sex-biased CeRNA regulation of gene

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Sex-biased eQTL regulation of gene

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Sex-biased eQTM regulation of gene

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Sex-biased sQTL regulation of gene

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Sex-biased sQTM regulation of gene

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Related disease information of gene

Gene: ENSG00000187608

Summary for ISG15

check button Gene summary

Gene informationEnsembl ID

ENSG00000187608

Gene symbol

ISG15

Gene nameISG15 ubiquitin like modifier
HGNC

4053

Entrez ID

9636

Gene typeprotein_coding
SynonymsISG15|IFI15|UCRP
UniProtAcc

P05161


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

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Structure and expression level for ISG15

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
ISG151.17e+031.06e+002.43e-014.35e+001.34e-053.96e-05KIRP
ISG156.07e+033.09e+004.72e-016.53e+006.48e-117.53e-09ESCA

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
ISG155.04e+031.47e+004.14e-013.56e+003.67e-042.54e-03STAD
ISG157.08e+033.52e+001.70e-012.07e+011.85e-956.47e-94BRCA

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Sex-biased somatic mutation for ISG15

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

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DNA methylation with beta values for ISG15

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

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Exon skipping events with PSI in TCGA for ISG15

∗Please access ExonSkipDB for exon skipping annotation.
check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

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RNA A-to-I editing events in TCGA for ISG15

∗Please access CAeditome for RNA editing annotation.
check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

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Sex-biased TF-Gene network for ISG15

check buttonTFs related to ISG15.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType

check buttonISG15 related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

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Sex-biased RBP-ES network for ISG15

check buttonRBPs related to ES in ISG15.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType

check buttonISG15 related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

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Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

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Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs76474919chr1:6776738:C:T-0.05458767156017010.0470899806102484LGGFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs4313364chr1:4035035:C:T-0.192041657544340.0366573627866816PAADMale-baised eQTL
rs10864294chr1:7333260:C:T-0.05403104335377010.00326372803586525LIHCMale-baised eQTL
rs11121524chr1:10172476:C:G-0.04399358282718420.0358495219154618LIHCMale-baised eQTL
rs55958200chr1:2808685:C:T-0.06512356996056930.0400916963664687LIHCMale-baised eQTL
rs80245464chr1:5101257:T:C-0.1129553684120341.70353079356013e-05LGGMale-baised eQTL
rs74953321chr1:5095503:T:A-0.110056829728792.84999804132605e-05LGGMale-baised eQTL
rs75180336chr1:5089993:T:C-0.1098959411268943.05518452187834e-05LGGMale-baised eQTL
rs75651808chr1:5090946:T:C-0.1098959411268943.05518452187834e-05LGGMale-baised eQTL
rs112465603chr1:5091154:A:C-0.1098959411268943.05518452187834e-05LGGMale-baised eQTL
rs111458522chr1:5091710:G:T-0.1098959411268943.05518452187834e-05LGGMale-baised eQTL
rs6668597chr1:5093363:C:G-0.1098959411268943.05518452187834e-05LGGMale-baised eQTL
rs112203030chr1:5094043:A:T-0.1098959411268943.05518452187834e-05LGGMale-baised eQTL
rs13374259chr1:5094527:T:G-0.1098959411268943.05518452187834e-05LGGMale-baised eQTL
rs13374190chr1:5094822:A:G-0.1098959411268943.05518452187834e-05LGGMale-baised eQTL
rs13374274chr1:5094914:T:A-0.1098959411268943.05518452187834e-05LGGMale-baised eQTL
rs2169087chr1:5095249:G:A-0.1098959411268943.05518452187834e-05LGGMale-baised eQTL
rs2334262chr1:5096960:C:A-0.1098959411268943.05518452187834e-05LGGMale-baised eQTL
rs115481549chr1:5097606:G:A-0.1098959411268943.05518452187834e-05LGGMale-baised eQTL
rs77029010chr1:5098314:G:A-0.1098959411268943.05518452187834e-05LGGMale-baised eQTL
rs13374176chr1:5094505:A:G-0.1072722276178584.94112367143262e-05LGGMale-baised eQTL
rs115070454chr1:5088783:T:C-0.1071500109475554.95956047708719e-05LGGMale-baised eQTL
rs74622687chr1:5087199:C:G-0.09696013744761420.000276815615762736LGGMale-baised eQTL
rs112536368chr1:5086278:C:T-0.09688667018280180.000284550412155328LGGMale-baised eQTL
rs10799171chr1:4055516:T:C--0.04611952181204530.0136745083865406KIRCMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

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Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription
eQTM boxplot analysisGene ID: ENSG00000187608
CpG Site: cg20062691
Position to Gene: gene,exon,CDS
Male Effect: -0.462301726387199
Female Effect: -
eQTM boxplot analysisGene ID: ENSG00000187608
CpG Site: cg03811829
Position to Gene: gene,exon,CDS
Male Effect: -0.462301726387199
Female Effect: -
eQTM boxplot analysisGene ID: ENSG00000187608
CpG Site: cg25350899
Position to Gene: gene,enhancer
Male Effect: -0.44214399747186
Female Effect: -
eQTM boxplot analysisGene ID: ENSG00000187608
CpG Site: cg16526047
Position to Gene: gene,exon,UTR
Male Effect: -0.289494765731988
Female Effect: -

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type
cg20062691chr1:1014012gene,exon,CDS-0.4623017263871992.42094658152113e-28-0.70736950986853328.233340464362258e-32KIRP
cg03811829chr1:1014069gene,exon,CDS-0.4623017263871992.42094658152113e-28-0.70736950986853328.233340464362258e-32KIRP
cg25350899chr1:1006002gene,enhancer-0.442143997471862.50517868929596e-08-0.43532981775480769.976151510289891e-12LUAD
cg16526047chr1:1014513gene,exon,UTR-0.2894947657319884.13377390221184e-11-0.42393900698548594.919806592461471e-14LGG

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

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Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

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Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

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Related disease information of ISG15

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource
ENSG00000187608ISG15C0011574Involutional Depression1CTD_human
ENSG00000187608ISG15C0021400Influenza1CTD_human
ENSG00000187608ISG15C1269683Major Depressive Disorder1CTD_human
ENSG00000187608ISG15C1571983Involutional paraphrenia1CTD_human
ENSG00000187608ISG15C1571984Psychosis, Involutional1CTD_human
ENSG00000187608ISG15C2239176Liver carcinoma1CTD_human
ENSG00000187608ISG15C4015293IMMUNODEFICIENCY 38 WITH BASAL GANGLIA CALCIFICATION1CTD_human