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Center for Computational Systems Medicine
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Gene summary

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Gene structure and Gene expression level

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Sex-biased somatic mutation

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DNA methylation with beta values in gene

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Exon skipping events with PSI in TCGA

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RNA A-to-I editing events in TCGA

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Sex-biased TF-Gene network of gene

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Sex-biased RBP-ES network of gene

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Sex-biased CeRNA regulation of gene

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Sex-biased eQTL regulation of gene

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Sex-biased eQTM regulation of gene

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Sex-biased sQTL regulation of gene

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Sex-biased sQTM regulation of gene

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Related disease information of gene

Gene: ENSG00000182195

Summary for LDOC1

check button Gene summary

Gene informationEnsembl ID

ENSG00000182195

Gene symbol

LDOC1

Gene nameLDOC1 regulator of NFKB signaling
HGNC

6548

Entrez ID

23641

Gene typeprotein_coding
SynonymsLDOC1|Mar7|Mart7|SIRH7|RTL7
UniProtAcc

O95751


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

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Structure and expression level for LDOC1

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
LDOC13.32e+031.43e+002.95e-014.83e+001.37e-067.77e-05BRCA

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
LDOC18.00e+02-1.20e+003.10e-01-3.80e+001.60e-044.20e-04HNSC
LDOC11.06e+02-1.31e+002.57e-01-5.09e+003.54e-071.43e-06COAD
LDOC11.35e+032.53e+004.88e-015.19e+002.06e-071.72e-06CHOL

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
LDOC11.30e+02-1.24e+004.06e-01-3.06e+002.21e-036.87e-03READ

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Sex-biased somatic mutation for LDOC1

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

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DNA methylation with beta values for LDOC1

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
BRCAcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.38e-013.99e-025.16e+002.43e-071.16e-053.98e-01
BRCAcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.85e-011.81e-025.16e+002.43e-071.16e-053.67e-01
BRCAcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter3.40e-012.29e-025.16e+002.43e-071.16e-053.17e-01
BRCAcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.39e-011.68e-013.57e+003.56e-044.72e-031.71e-01
BRCAcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter2.86e-012.56e-025.06e+004.27e-071.43e-052.61e-01
BRCAcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body5.28e-011.22e-015.16e+002.43e-071.16e-054.06e-01
BRCAcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter4.29e-015.67e-022.89e+003.88e-031.84e-023.72e-01
BRCAcg19208477chrX:141177419CGI:chrX:141176765-141177220promoter2.04e-015.12e-025.00e+005.66e-071.79e-051.53e-01
BRCAcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter3.90e-018.04e-025.15e+002.64e-071.16e-053.09e-01
BRCAcg15490039chrX:141177534CGI:chrX:141176765-141177220promoter2.03e-016.37e-024.76e+001.94e-065.14e-051.40e-01
KIRCcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter2.45e-012.65e-021.39e+016.75e-441.52e-422.18e-01
LGGcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.46e-014.96e-021.96e+011.74e-855.54e-843.97e-01
LGGcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.85e-011.85e-021.98e+017.53e-873.74e-853.67e-01
LGGcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter3.67e-012.47e-021.97e+012.74e-861.14e-843.42e-01
LGGcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter2.23e-012.56e-021.89e+011.64e-793.42e-781.98e-01
LGGcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body5.11e-011.08e-011.92e+016.06e-821.44e-804.04e-01
LGGcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter4.44e-016.38e-021.80e+014.58e-727.55e-713.80e-01
LGGcg19208477chrX:141177419CGI:chrX:141176765-141177220promoter1.74e-016.27e-021.58e+011.90e-562.28e-551.11e-01
LGGcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter4.00e-012.46e-011.03e+016.90e-255.11e-241.54e-01
LGGcg15490039chrX:141177534CGI:chrX:141176765-141177220promoter1.80e-016.65e-021.55e+015.20e-545.97e-531.13e-01
LUSCcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.57e-011.33e-011.29e+015.52e-388.43e-373.24e-01
LUSCcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body4.02e-011.06e-011.24e+011.44e-352.08e-342.96e-01
LUSCcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter3.44e-017.69e-021.27e+015.81e-378.65e-362.67e-01
LUSCcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.44e-012.08e-011.03e+018.14e-259.41e-241.35e-01
LUSCcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter2.79e-017.29e-021.22e+014.54e-346.32e-332.07e-01
LUSCcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body5.20e-012.87e-011.15e+019.89e-311.29e-292.33e-01
LUSCcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter4.13e-011.20e-011.18e+012.53e-323.40e-312.93e-01
LUSCcg19208477chrX:141177419CGI:chrX:141176765-141177220promoter1.97e-019.12e-021.14e+013.10e-304.01e-291.06e-01
LUSCcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter3.91e-011.99e-011.11e+018.11e-291.02e-271.92e-01
SKCMcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.31e-019.99e-021.65e+011.99e-613.72e-603.31e-01
SKCMcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.29e-014.41e-021.71e+011.19e-652.55e-642.85e-01
SKCMcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter3.30e-016.67e-021.57e+011.04e-551.69e-542.63e-01
SKCMcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter1.98e-014.52e-021.42e+011.05e-451.41e-441.53e-01
SKCMcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body5.27e-012.69e-011.31e+013.04e-393.63e-382.58e-01
SKCMcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter4.08e-011.00e-011.39e+013.57e-444.69e-433.08e-01
SKCMcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter3.17e-011.46e-011.34e+019.08e-411.12e-391.71e-01
STADcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body5.98e-014.82e-015.02e+005.04e-073.06e-061.15e-01
STADcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body5.46e-014.18e-015.82e+005.81e-093.96e-081.29e-01
STADcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter5.30e-013.82e-016.33e+002.49e-101.84e-091.48e-01
STADcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.96e-012.65e-018.58e+009.75e-181.03e-161.32e-01
STADcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter6.39e-014.45e-016.06e+001.36e-099.60e-091.93e-01
KIRPcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter2.03e-012.63e-021.16e+012.34e-316.82e-301.77e-01
SARCcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.07e-017.30e-021.30e+012.31e-389.90e-373.34e-01
SARCcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.40e-015.43e-021.25e+015.95e-362.14e-342.86e-01
SARCcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter2.98e-014.49e-021.29e+017.72e-383.15e-362.54e-01
SARCcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter1.97e-014.05e-021.09e+017.57e-281.70e-261.57e-01
SARCcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body5.05e-011.95e-011.16e+014.31e-311.18e-293.10e-01
SARCcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter4.14e-011.13e-011.01e+017.49e-241.29e-223.01e-01
SARCcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter3.70e-012.12e-017.72e+001.18e-141.30e-131.58e-01
PCPGcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body3.44e-014.18e-021.16e+013.96e-311.92e-293.02e-01
PCPGcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body2.86e-011.72e-021.16e+013.83e-311.92e-292.69e-01
PCPGcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter2.70e-012.34e-021.16e+013.96e-311.92e-292.47e-01
PCPGcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body2.73e-018.74e-021.02e+011.34e-241.66e-231.85e-01
PCPGcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.26e-011.03e-011.16e+014.82e-311.95e-293.23e-01
PCPGcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter4.60e-016.02e-021.05e+011.32e-251.72e-243.99e-01
PCPGcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter3.28e-011.15e-011.03e+017.27e-259.10e-242.13e-01
PCPGcg15490039chrX:141177534CGI:chrX:141176765-141177220promoter1.71e-016.77e-028.30e+001.07e-168.27e-161.03e-01
PAADcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.79e-012.53e-017.00e+002.55e-122.38e-112.26e-01
PAADcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body4.33e-012.18e-017.49e+006.64e-146.81e-132.15e-01
PAADcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter3.94e-011.88e-017.59e+003.10e-143.25e-132.06e-01
PAADcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body4.21e-012.23e-019.27e+001.87e-202.79e-191.98e-01
PAADcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter3.43e-012.06e-014.92e+008.72e-075.77e-061.37e-01
PAADcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body5.19e-013.92e-014.58e+004.73e-062.95e-051.27e-01
PAADcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter4.83e-012.10e-017.13e+009.88e-139.48e-122.74e-01
PAADcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter4.35e-013.29e-014.73e+002.23e-061.43e-051.06e-01
READcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter6.66e-015.28e-014.33e+001.50e-057.90e-051.39e-01
READcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter7.30e-016.19e-012.66e+007.88e-032.13e-021.10e-01
READcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter7.83e-016.71e-013.06e+002.24e-038.04e-031.12e-01
GBMcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.81e-015.35e-026.74e+001.63e-112.71e-104.28e-01
GBMcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body4.21e-011.90e-026.74e+001.63e-112.71e-104.02e-01
GBMcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter3.78e-012.12e-026.74e+001.63e-112.71e-103.57e-01
GBMcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.27e-012.14e-013.97e+007.12e-053.64e-041.14e-01
GBMcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter2.38e-012.58e-026.26e+003.75e-104.02e-092.13e-01
GBMcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body5.32e-011.16e-016.71e+001.97e-113.03e-104.15e-01
GBMcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter4.82e-018.07e-024.56e+005.22e-063.22e-054.02e-01
GBMcg19208477chrX:141177419CGI:chrX:141176765-141177220promoter1.59e-014.91e-025.38e+007.66e-085.94e-071.10e-01
GBMcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter3.60e-011.40e-014.99e+006.16e-074.29e-062.20e-01
GBMcg15490039chrX:141177534CGI:chrX:141176765-141177220promoter1.58e-014.73e-024.96e+007.11e-074.91e-061.10e-01
ESCAcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body5.67e-013.98e-012.45e+001.41e-023.23e-021.69e-01
ESCAcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body5.28e-013.49e-012.90e+003.78e-031.36e-021.79e-01
ESCAcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter4.75e-013.18e-012.56e+001.05e-022.74e-021.57e-01
ESCAcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.36e-012.19e-014.43e+009.56e-065.91e-051.17e-01
ESCAcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter5.16e-013.69e-012.44e+001.45e-023.27e-021.48e-01
ESCAcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter6.07e-013.92e-012.51e+001.22e-022.98e-022.15e-01
ESCAcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter5.21e-014.03e-012.05e+004.07e-024.75e-021.18e-01
LAMLcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body5.41e-012.35e-017.01e+002.44e-121.23e-113.06e-01
LAMLcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body5.22e-012.61e-015.93e+003.04e-091.29e-082.61e-01
LAMLcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter5.20e-012.62e-015.77e+008.04e-093.34e-082.58e-01
LAMLcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body5.38e-014.22e-012.88e+004.00e-031.06e-021.15e-01
LAMLcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter4.64e-012.09e-016.14e+008.21e-103.59e-092.55e-01
LAMLcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body6.36e-015.05e-012.52e+001.19e-022.44e-021.32e-01
LAMLcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter5.12e-011.94e-017.57e+003.78e-142.13e-133.18e-01
LAMLcg19208477chrX:141177419CGI:chrX:141176765-141177220promoter3.06e-011.62e-015.95e+002.71e-091.15e-081.44e-01
LAMLcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter4.74e-012.64e-016.52e+006.95e-113.23e-102.10e-01
LAMLcg15490039chrX:141177534CGI:chrX:141176765-141177220promoter2.49e-011.42e-014.47e+007.65e-062.73e-051.07e-01
THYMcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.25e-015.38e-029.39e+006.07e-211.00e-193.71e-01
THYMcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.75e-012.37e-029.40e+005.48e-211.00e-193.51e-01
THYMcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter3.18e-012.73e-029.38e+006.38e-211.02e-192.90e-01
THYMcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body4.39e-012.73e-017.34e+002.21e-131.21e-121.66e-01
THYMcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter2.47e-012.41e-029.23e+002.59e-203.18e-192.22e-01
THYMcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body5.00e-012.00e-019.39e+005.77e-211.00e-192.99e-01
THYMcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter3.99e-016.27e-028.19e+002.69e-161.89e-153.36e-01
THYMcg19208477chrX:141177419CGI:chrX:141176765-141177220promoter1.84e-016.09e-028.62e+006.53e-185.42e-171.23e-01
THYMcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter3.83e-011.10e-019.34e+009.55e-211.33e-192.74e-01
THYMcg15490039chrX:141177534CGI:chrX:141176765-141177220promoter1.85e-017.77e-027.05e+001.74e-128.91e-121.07e-01
MESOcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body3.79e-015.28e-026.05e+001.46e-092.54e-083.26e-01
MESOcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.04e-013.39e-025.96e+002.56e-093.61e-082.70e-01
MESOcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter2.76e-012.92e-026.05e+001.46e-092.54e-082.47e-01
MESOcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter1.97e-012.71e-025.99e+002.08e-093.08e-081.70e-01
MESOcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.50e-011.53e-016.01e+001.80e-092.82e-082.96e-01
MESOcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter3.61e-018.46e-025.10e+003.32e-072.84e-062.76e-01
MESOcg19208477chrX:141177419CGI:chrX:141176765-141177220promoter1.72e-017.12e-025.32e+001.04e-079.51e-071.01e-01
MESOcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter3.25e-011.48e-014.63e+003.73e-062.78e-051.77e-01
UVMcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body2.89e-015.05e-027.62e+002.57e-149.97e-132.39e-01
UVMcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body2.85e-011.54e-027.54e+004.68e-141.11e-122.69e-01
UVMcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter2.46e-012.24e-026.96e+003.43e-123.35e-112.23e-01
UVMcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter1.33e-012.25e-024.61e+003.99e-061.71e-051.11e-01
UVMcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body3.80e-019.45e-027.51e+005.84e-141.23e-122.86e-01
UVMcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter3.19e-015.56e-027.12e+001.05e-121.14e-112.64e-01
UVMcg19208477chrX:141177419CGI:chrX:141176765-141177220promoter1.53e-015.03e-024.87e+001.10e-065.10e-061.03e-01
UVMcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter2.59e-011.10e-015.58e+002.38e-081.39e-071.49e-01
UVMcg15490039chrX:141177534CGI:chrX:141176765-141177220promoter1.92e-016.92e-023.17e+001.54e-034.52e-031.23e-01
ACCcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter4.09e-015.23e-027.37e+001.71e-133.92e-123.57e-01
ACCcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.69e-011.72e-027.47e+008.02e-142.68e-123.51e-01
ACCcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter3.29e-011.05e-016.33e+002.53e-102.99e-092.24e-01
ACCcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter1.98e-012.12e-026.66e+002.80e-113.72e-101.77e-01
ACCcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.88e-011.25e-017.41e+001.27e-133.15e-123.62e-01
ACCcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.57e-011.92e-014.61e+004.06e-063.21e-051.65e-01
ACCcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.18e-014.71e-027.46e+008.66e-142.68e-123.71e-01
ACCcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter3.25e-012.87e-027.27e+003.62e-137.24e-122.97e-01
KICHcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body2.85e-016.11e-026.40e+001.55e-103.04e-092.24e-01
KICHcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body2.18e-012.18e-026.59e+004.45e-111.88e-091.96e-01
KICHcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter1.60e-012.80e-026.28e+003.38e-105.62e-091.32e-01
KICHcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body2.57e-011.03e-014.97e+006.77e-076.25e-061.54e-01
KICHcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.01e-011.55e-015.96e+002.54e-093.30e-082.46e-01
KICHcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter2.80e-018.22e-025.62e+001.87e-082.06e-071.97e-01
DLBCcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body5.85e-014.74e-012.61e+009.13e-032.13e-021.11e-01
DLBCcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter5.70e-014.17e-012.75e+005.92e-031.54e-021.53e-01
DLBCcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter6.76e-014.98e-012.57e+001.03e-022.32e-021.78e-01
CHOLcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.98e-016.61e-025.03e+004.90e-075.60e-064.32e-01
CHOLcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body4.37e-014.63e-025.00e+005.79e-076.26e-063.91e-01
CHOLcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter4.23e-014.32e-025.03e+004.90e-075.60e-063.80e-01
CHOLcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body4.09e-011.46e-014.58e+004.55e-063.43e-052.63e-01
CHOLcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter4.19e-013.74e-024.74e+002.10e-061.72e-053.81e-01
CHOLcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body5.64e-011.70e-014.62e+003.91e-062.98e-053.94e-01
CHOLcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter4.96e-019.61e-024.30e+001.72e-051.08e-044.00e-01
CHOLcg19208477chrX:141177419CGI:chrX:141176765-141177220promoter2.50e-016.98e-024.14e+003.49e-052.01e-041.80e-01
CHOLcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter4.63e-011.11e-014.84e+001.30e-061.17e-053.52e-01
CHOLcg15490039chrX:141177534CGI:chrX:141176765-141177220promoter2.79e-011.08e-014.39e+001.12e-057.39e-051.71e-01

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
LUADcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body2.76e-011.62e-013.92e+008.81e-052.53e-041.13e-01
HNSCcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body3.17e-016.23e-024.60e+004.14e-061.84e-052.55e-01
HNSCcg09112156chrX:141177074CGI:chrX:141176765-141177220UTR,promoter,exon,gene body2.74e-013.81e-024.42e+009.73e-063.72e-052.35e-01
HNSCcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter2.14e-012.36e-024.89e+009.87e-075.75e-061.90e-01
HNSCcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body4.38e-011.75e-014.59e+004.34e-061.91e-052.63e-01
HNSCcg19208477chrX:141177419CGI:chrX:141176765-141177220promoter2.00e-017.21e-023.48e+004.95e-049.99e-041.28e-01
LUSCcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body2.87e-011.55e-013.03e+002.46e-034.84e-031.32e-01
COADcg14562990chrX:141177441CGI:chrX:141176765-141177220promoter6.41e-013.41e-015.29e+001.19e-075.16e-063.01e-01
LIHCcg25870731chrX:141176844CGI:chrX:141176765-141177220promoter,exon,CDS,gene body2.54e-017.87e-022.27e+002.30e-022.53e-021.76e-01
LIHCcg27076487chrX:141177179CGI:chrX:141176765-141177220promoter2.07e-013.16e-023.80e+001.43e-042.84e-041.75e-01
LIHCcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter1.58e-012.77e-022.63e+008.43e-031.05e-021.30e-01
LIHCcg20104776chrX:141176991CGI:chrX:141176765-141177220promoter,exon,CDS,gene body5.01e-012.65e-013.81e+001.37e-042.73e-042.36e-01
LIHCcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter2.88e-019.26e-022.68e+007.41e-039.34e-031.95e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
BRCAcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.39e-014.44e-01-9.56e+001.20e-217.46e-21-1.05e-01
BRCAcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter2.86e-011.80e-015.82e+005.98e-091.36e-081.06e-01
BRCAcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter4.29e-015.33e-01-7.89e+003.00e-151.11e-14-1.04e-01
KIRCcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter2.45e-019.82e-022.56e+001.05e-021.76e-021.46e-01
LUADcg16697940chrX:141177136CGI:chrX:141176765-141177220promoter3.19e-011.84e-012.61e+009.16e-031.48e-021.35e-01
BLCAcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.22e-014.45e-01-3.34e+008.47e-044.48e-03-1.23e-01
LIHCcg22970017chrX:141176316CGI:chrX:141176765-141177220UTR,promoter,exon,gene body3.23e-014.38e-01-3.42e+006.29e-041.57e-03-1.15e-01
KIRPcg00917018chrX:141177364CGI:chrX:141176765-141177220promoter3.87e-015.41e-01-3.18e+001.46e-034.90e-03-1.54e-01

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Exon skipping events with PSI in TCGA for LDOC1

∗Please access ExonSkipDB for exon skipping annotation.
check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

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RNA A-to-I editing events in TCGA for LDOC1

∗Please access CAeditome for RNA editing annotation.
check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

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Sex-biased TF-Gene network for LDOC1

check buttonTFs related to LDOC1.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
TF Gene
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
PCPGBARX1LDOC13.11e+003.31e-034.16e+009.86e-01Female-biased
PCPGHMX2LDOC13.72e+008.10e-034.57e+009.86e-01Female-biased
PCPGPOU2F2LDOC12.65e+001.62e-033.84e+009.80e-01Female-biased
PCPGPOU2F3LDOC13.37e+007.54e-034.23e+009.83e-01Female-biased
PCPGZNF211LDOC14.72e+001.60e-025.42e+009.82e-01Female-biased
PCPGZNF35LDOC12.51e+006.86e-043.88e+009.83e-01Female-biased
PCPGZNF584LDOC12.60e+001.05e-033.88e+009.82e-01Female-biased
PCPGZNF620LDOC12.84e+002.46e-033.95e+009.83e-01Female-biased
PCPGZNF79LDOC11.96e+007.73e-053.78e+009.80e-01Female-biased

check buttonLDOC1 related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

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Sex-biased RBP-ES network for LDOC1

check buttonRBPs related to ES in LDOC1.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType

check buttonLDOC1 related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

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Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

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Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

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Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription
eQTM boxplot analysisGene ID: ENSG00000182195
CpG Site: cg20104776
Position to Gene: gene,exon,CDS,promoter
Male Effect: -0.105215774288751
Female Effect: -
eQTM boxplot analysisGene ID: ENSG00000182195
CpG Site: cg00917018
Position to Gene: promoter
Male Effect: -0.0657545567320079
Female Effect: -
eQTM boxplot analysisGene ID: ENSG00000182195
CpG Site: cg09112156
Position to Gene: gene,exon,promoter,UTR
Male Effect: -0.0746618227748657
Female Effect: -
eQTM boxplot analysisGene ID: ENSG00000182195
CpG Site: cg14562990
Position to Gene: promoter
Male Effect: -0.0770802072128468
Female Effect: -
eQTM boxplot analysisGene ID: ENSG00000182195
CpG Site: cg25870731
Position to Gene: gene,exon,CDS,promoter
Male Effect: -0.070482713374659
Female Effect: -
eQTM boxplot analysisGene ID: ENSG00000182195
CpG Site: cg20104776
Position to Gene: gene,exon,CDS,promoter
Male Effect: -0.0577558958050777
Female Effect: -
eQTM boxplot analysisGene ID: ENSG00000182195
CpG Site: cg20104776
Position to Gene: gene,exon,CDS,promoter
Male Effect: -0.0897561147737711
Female Effect: -
eQTM boxplot analysisGene ID: ENSG00000182195
CpG Site: cg00917018
Position to Gene: promoter
Male Effect: -0.107097293867189
Female Effect: -
eQTM boxplot analysisGene ID: ENSG00000182195
CpG Site: cg27076487
Position to Gene: promoter
Male Effect: -0.109769052264981
Female Effect: -
eQTM boxplot analysisGene ID: ENSG00000182195
CpG Site: cg20104776
Position to Gene: gene,exon,CDS,promoter
Male Effect: -0.0715234460771011
Female Effect: -

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type
cg20104776chrX:141176991gene,exon,CDS,promoter-0.1052157742887513.86235025240476e-05-0.48698516289883793.680046817139443e-07PAAD
cg00917018chrX:141177364promoter-0.06575455673200797.57983957609857e-05-0.334971696249262934.0960991770590613e-07LUAD
cg09112156chrX:141177074gene,exon,promoter,UTR-0.07466182277486571.26145925707971e-07-0.41340272529004841.717068323702614e-10STAD
cg14562990chrX:141177441promoter-0.07708020721284681.37173939112712e-07-0.412398438901455561.9192042492752758e-10STAD
cg25870731chrX:141176844gene,exon,CDS,promoter-0.0704827133746599.22141947898088e-07-0.39122973348029851.842325069799734e-09STAD
cg20104776chrX:141176991gene,exon,CDS,promoter-0.05775589580507772.32906322182451e-07-0.385922274244564052.0706980881458338e-10LIHC
cg20104776chrX:141176991gene,exon,CDS,promoter-0.08975611477377116.45381968567203e-13-0.43397908649502661.9400546179799568e-15BLCA
cg00917018chrX:141177364promoter-0.1070972938671891.2809048463938e-10-0.41619488804360068.706493061664182e-14BLCA
cg27076487chrX:141177179promoter-0.1097690522649813.33971532045579e-10-0.39681208474069216.052585938457978e-13BLCA
cg20104776chrX:141176991gene,exon,CDS,promoter-0.07152344607710113.79363500576414e-10-0.36266345266388477.007072043710652e-13HNSC

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

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Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

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Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

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Related disease information of LDOC1

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource