SexAnnoDB Logo

Home

Download

Statistics

Examples

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Gene structure and Gene expression level

leaf

Sex-biased somatic mutation

leaf

DNA methylation with beta values in gene

leaf

Exon skipping events with PSI in TCGA

leaf

RNA A-to-I editing events in TCGA

leaf

Sex-biased TF-Gene network of gene

leaf

Sex-biased RBP-ES network of gene

leaf

Sex-biased CeRNA regulation of gene

leaf

Sex-biased eQTL regulation of gene

leaf

Sex-biased eQTM regulation of gene

leaf

Sex-biased sQTL regulation of gene

leaf

Sex-biased sQTM regulation of gene

leaf

Related disease information of gene

Gene: ENSG00000180104

Summary for EXOC3

check button Gene summary

Gene informationEnsembl ID

ENSG00000180104

Gene symbol

EXOC3

Gene nameexocyst complex component 3
HGNC

30378

Entrez ID

11336

Gene typeprotein_coding
SynonymsEXOC3|Sec6p
UniProtAcc

O60645


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

Top

Structure and expression level for EXOC3

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

Top

Sex-biased somatic mutation for EXOC3

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

Top

DNA methylation with beta values for EXOC3

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
LUADcg17553881chr5:443872CGI:chr5:442705-443489promoter,gene body2.19e-013.27e-01-3.44e+005.72e-041.21e-03-1.08e-01
LUADcg16322479chr5:444113CGI:chr5:442705-443489promoter,gene body6.36e-017.62e-01-3.38e+007.15e-041.46e-03-1.26e-01
LUSCcg17553881chr5:443872CGI:chr5:442705-443489promoter,gene body1.95e-013.17e-01-2.80e+005.07e-038.24e-03-1.23e-01
LUSCcg21151960chr5:443965CGI:chr5:442705-443489promoter,gene body4.52e-016.86e-01-4.00e+006.36e-055.92e-04-2.35e-01
LUSCcg16322479chr5:444113CGI:chr5:442705-443489promoter,gene body4.90e-017.67e-01-4.22e+002.44e-055.26e-04-2.77e-01
CHOLcg21151960chr5:443965CGI:chr5:442705-443489promoter,gene body4.49e-016.40e-01-2.51e+001.22e-022.39e-02-1.91e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
BRCAcg21151960chr5:443965CGI:chr5:442705-443489promoter,gene body4.61e-015.87e-01-8.14e+004.09e-161.63e-15-1.26e-01
HNSCcg21151960chr5:443965CGI:chr5:442705-443489promoter,gene body5.58e-016.64e-01-2.12e+003.44e-023.88e-02-1.06e-01
HNSCcg16322479chr5:444113CGI:chr5:442705-443489promoter,gene body5.79e-016.86e-01-2.14e+003.25e-023.74e-02-1.06e-01
LIHCcg17553881chr5:443872CGI:chr5:442705-443489promoter,gene body1.75e-013.17e-01-4.44e+009.20e-066.46e-05-1.42e-01
LIHCcg16322479chr5:444113CGI:chr5:442705-443489promoter,gene body6.40e-017.92e-01-3.38e+007.38e-041.78e-03-1.52e-01

Top

Exon skipping events with PSI in TCGA for EXOC3

∗Please access ExonSkipDB for exon skipping annotation.
check buttonLandscape of exon skipping events across multiple cancer types.
AS event heatmap

check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

Top

RNA A-to-I editing events in TCGA for EXOC3

∗Please access CAeditome for RNA editing annotation.
check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

Top

Sex-biased TF-Gene network for EXOC3

check buttonTFs related to EXOC3.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
TF Gene
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
BRCAPLAGL2EXOC33.21e+005.95e-034.58e+009.85e-01Female-biased

check buttonEXOC3 related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

Top

Sex-biased RBP-ES network for EXOC3

check buttonRBPs related to ES in EXOC3.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
RBP ES
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
STADSAMD4Aexon_skip_4336398.88e+009.94e-018.23e+001.03e-03Male-biased
UVMSAMD4Aexon_skip_4336398.32e+009.89e-017.94e+003.33e-03Male-biased
LIHCSAMD4Aexon_skip_4336398.62e+009.88e-018.16e+005.60e-03Male-biased
LUSCHNRNPA1L2exon_skip_4336608.70e+005.14e-039.12e+009.91e-01Female-biased
LUSCSAMD4Aexon_skip_4336398.80e+009.87e-018.40e+007.71e-03Male-biased
DLBCHNRNPA1L2exon_skip_4336608.72e+001.28e-029.03e+009.83e-01Female-biased
CHOLHNRNPA1L2exon_skip_4336609.07e+007.14e-039.52e+009.90e-01Female-biased
CHOLSTAR-PAPexon_skip_4336351.20e+019.87e-011.16e+011.27e-02Male-biased
BRCAHNRNPA1L2exon_skip_4336609.22e+009.88e-018.61e+007.96e-03Male-biased
BRCASAMD4Aexon_skip_4336398.39e+001.60e-039.62e+009.96e-01Female-biased
THCANCLexon_skip_4336547.03e+009.80e-016.70e+006.18e-03Male-biased
PCPGHNRNPA1L2exon_skip_4336608.88e+008.11e-049.42e+009.96e-01Female-biased
MESOHNRNPA1L2exon_skip_4336608.94e+003.73e-039.38e+009.93e-01Female-biased
MESOSTAR-PAPexon_skip_4336351.16e+013.22e-031.21e+019.96e-01Female-biased
PAADSTAR-PAPexon_skip_4336351.19e+013.95e-041.24e+019.99e-01Female-biased
KIRCHNRNPA1L2exon_skip_4336609.01e+009.87e-018.69e+009.31e-03Male-biased
KICHHNRNPA1L2exon_skip_4336608.83e+002.64e-039.27e+009.94e-01Female-biased
KICHSAMD4Aexon_skip_4336397.99e+007.88e-038.33e+009.85e-01Female-biased
KICHSTAR-PAPexon_skip_4336351.16e+011.95e-031.20e+019.97e-01Female-biased

check buttonEXOC3 related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

Top

Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

Top

Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs10069126chr5:4157392:C:G-0.296868383259480.0122859746942743PAADFemale-baised eQTL
rs11750185chr5:9674624:T:C-0.1043611181616440.0183835694005293HNSCFemale-baised eQTL
rs2074608chr5:9196783:G:C-0.1649796405869130.011558029955387BLCAFemale-baised eQTL
rs6555595chr5:9198860:T:C-0.1642699114715630.0126043143998513BLCAFemale-baised eQTL
rs3822776chr5:9197730:G:T-0.1676119344590310.0127884449967212BLCAFemale-baised eQTL
rs73740392chr5:9197786:T:G-0.1623549506604810.0176238038088564BLCAFemale-baised eQTL
rs73740393chr5:9197788:T:G-0.1623549506604810.0176238038088564BLCAFemale-baised eQTL
rs7731357chr5:5328568:C:T-0.06070799659520120.0205106967041787LUADFemale-baised eQTL
rs10053085chr5:6841894:G:A--0.04361892803572260.0223310444702023LUADFemale-baised eQTL
rs903083chr5:4092096:T:C--0.05398064505573680.0228894577156596LUADFemale-baised eQTL
rs870348chr5:6844904:A:T--0.0436353727029120.0275299084380664LUADFemale-baised eQTL
rs13356203chr5:6849242:G:A--0.04215218133334330.0414558526254101LUADFemale-baised eQTL
rs74755975chr5:3422618:G:A-0.1065627692190880.0446823159547744COADFemale-baised eQTL
rs112468583chr5:3425530:T:C-0.1065627692190880.0446823159547744COADFemale-baised eQTL
rs78000638chr5:3430081:C:T-0.1065627692190880.0446823159547744COADFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs10155613chr5:2055214:T:C-0.120003080811590.00836161835037151THCAMale-baised eQTL
rs16883737chr5:9851109:G:C-0.09755734952020540.0406804308898695STADMale-baised eQTL
rs16883740chr5:9851222:T:C-0.09755734952020540.0406804308898695STADMale-baised eQTL
rs905843chr5:6528747:G:A-0.06074746020193094.00160155959687e-05BLCAMale-baised eQTL
rs34088226chr5:4308833:G:A-0.05067934084132060.017194559519341BLCAMale-baised eQTL
rs4702639chr5:9716191:C:T-0.04584668541994670.0193758830438176BLCAMale-baised eQTL
rs4701848chr5:9715684:A:G-0.04577433232604910.0197474139035143BLCAMale-baised eQTL
rs16880898chr5:8627414:A:T-0.03296655184165040.0434295682862771BLCAMale-baised eQTL
rs10062600chr5:9729704:G:T-0.04365077465808350.00418801281106249LUADMale-baised eQTL
rs16883461chr5:9730260:A:C-0.03986984074140780.00892076696600282LUADMale-baised eQTL
rs12655182chr5:5228206:G:T-0.09181446033894790.0182397117094367LUADMale-baised eQTL
rs10062592chr5:9729674:G:A-0.04057146577737750.0288708547694334LUADMale-baised eQTL
rs29675chr5:163654:G:A--0.03797711588861530.030175597658012LUADMale-baised eQTL
rs2202445chr5:7328063:G:C-0.03505504074271470.0364241826139235LUADMale-baised eQTL
rs73037129chr5:5228802:G:A-0.06365025318298070.0408738322018969LUADMale-baised eQTL
rs67061933chr5:7317848:A:G-0.03508091446303540.0418888817532674LUADMale-baised eQTL
rs11750162chr5:7316843:A:G-0.0346379402230180.0433464257404281LUADMale-baised eQTL
rs56173220chr5:8271488:A:G-0.03974233450124850.0450447319382478LUADMale-baised eQTL
rs1876158chr5:8271542:T:C-0.03974233450124850.0450447319382478LUADMale-baised eQTL
rs10053047chr5:7318478:C:T-0.03524043825493520.0452756569659451LUADMale-baised eQTL
rs80311093chr5:2532445:A:G-0.07208554746389880.0111248733916818COADMale-baised eQTL
rs34353738chr5:2533012:A:G-0.07208554746389880.0111248733916818COADMale-baised eQTL
rs6893457chr5:2533215:G:C-0.07208554746389880.0111248733916818COADMale-baised eQTL
rs34072096chr5:2534021:G:A-0.07208554746389880.0111248733916818COADMale-baised eQTL
rs11744632chr5:2534260:C:T-0.07208554746389880.0111248733916818COADMale-baised eQTL
rs6555425chr5:7021848:C:G--0.05738807454293490.0116436212768929COADMale-baised eQTL
rs72720952chr5:2535603:G:A-0.07132829800888420.0122031416102573COADMale-baised eQTL
rs17657162chr5:2535680:A:G-0.07132829800888420.0122031416102573COADMale-baised eQTL
rs16869904chr5:2536677:C:A-0.07092247010904680.0158762653152075COADMale-baised eQTL
rs1864071chr5:7436799:T:C--0.06356911484025950.0173525330851052COADMale-baised eQTL
rs6886502chr5:2537549:G:C-0.06997801719949760.0182217997268544COADMale-baised eQTL
rs6887706chr5:2537567:C:T-0.06997801719949760.0182217997268544COADMale-baised eQTL
rs6888076chr5:2537780:C:T-0.06997801719949760.0182217997268544COADMale-baised eQTL
rs6895153chr5:2533472:C:T-0.0691928375150170.0183999440128728COADMale-baised eQTL
rs74726970chr5:3158891:C:T--0.07790857491015030.0195755912375714COADMale-baised eQTL
rs72720951chr5:2532366:A:G-0.06919029936200150.0205249484152421COADMale-baised eQTL
rs275479chr5:6833683:A:G-0.05619175261309130.0207541041611417COADMale-baised eQTL
rs11748863chr5:3485286:T:A--0.0684135820201670.0246481884832561COADMale-baised eQTL
rs4866570chr5:3485873:G:T--0.06868456736593980.0277039849022846COADMale-baised eQTL
rs17598228chr5:2530680:G:A-0.06481285394157630.0293152213662052COADMale-baised eQTL
rs13164496chr5:2529768:G:A-0.0658287047376850.0294425441955051COADMale-baised eQTL
rs72720948chr5:2530408:C:T-0.0658287047376850.0294425441955051COADMale-baised eQTL
rs4701737chr5:6552711:G:T--0.05281824257899840.0306135553991698COADMale-baised eQTL
rs17622945chr5:3134669:C:T--0.09184097819601210.0307220910077146COADMale-baised eQTL
rs34235556chr5:2528537:T:A-0.06516209997443290.0327456780066382COADMale-baised eQTL
rs36004048chr5:2528569:C:T-0.06516209997443290.0327456780066382COADMale-baised eQTL
rs1394652chr5:8789831:C:T--0.05113177512174360.0343014181481189COADMale-baised eQTL
rs13171426chr5:2525770:G:A-0.06446604869223990.0364866445533227COADMale-baised eQTL
rs71577537chr5:2526629:C:T-0.06446604869223990.0364866445533227COADMale-baised eQTL
rs35234285chr5:2527407:A:G-0.06446604869223990.0364866445533227COADMale-baised eQTL
rs13174380chr5:2527752:A:G-0.06446604869223990.0364866445533227COADMale-baised eQTL
rs3925077chr5:9915287:G:A-0.06579635432868060.0410302725525193COADMale-baised eQTL
rs80168598chr5:3142331:G:C--0.0909750605812460.0419068779090766COADMale-baised eQTL
rs79643392chr5:3142732:C:G--0.0909750605812460.0419068779090766COADMale-baised eQTL
rs78362215chr5:3145121:C:T--0.0909750605812460.0419068779090766COADMale-baised eQTL
rs80169374chr5:3148926:C:T--0.0909750605812460.0419068779090766COADMale-baised eQTL
rs146723777chr5:3141242:C:T--0.090343877648150.0442666004591529COADMale-baised eQTL
rs181812432chr5:3141267:C:T--0.090343877648150.0442666004591529COADMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

Top

Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription
eQTM boxplot analysisGene ID: ENSG00000180104
CpG Site: cg21151960
Position to Gene: gene,promoter
Male Effect: -
Female Effect: -0.299376120235621

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type
cg21151960chr5:443965gene,promoter-0.2993761202356218.25899327948447e-09-0.40415271220629851.9389468772237625e-11LUAD

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

Top

Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

Top

Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

Top

Related disease information of EXOC3

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource