|
||||||
|
 | |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
|
Gene: ENSG00000174669 |
Summary for SLC29A2 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000174669 | Gene symbol | SLC29A2 |
| Gene name | solute carrier family 29 member 2 | |
| HGNC | 11004 | |
| Entrez ID | 3177 | |
| Gene type | protein_coding | |
| Synonyms | SLC29A2|DER12 | |
| UniProtAcc | Q14542 |
| Drugs associated with this gene(DrugBank). |
| Gene ID | Gene Symbol | Drug ID | Drug Name | Drug Type |
| ENSG00000174669 | SLC29A2 | DB00898 | Ethanol | SmallMoleculeDrug |
| Cancer therapeutic drugs associated with this gene(NCI). |
| Gene ID | Gene Name | Drug ID | Drug Name | Drug Type | Cancer |
Top |
Structure and expression level for SLC29A2 |
| AS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure. ∗For more information on exon skipping events please check the ExonskipDB database. ∗For more information on exon skipping events please check the CAeditome database. |
 |
| Landscape of gene expressions across multiple cancer types. |
 |
| Differentially expressed gene analysis between tumor male and tumor female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| Differentially expressed gene analysis between tumor male and normal male samples. |
 |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| SLC29A2 | 5.95e+02 | -1.13e+00 | 2.34e-01 | -4.81e+00 | 1.48e-06 | 5.12e-06 | KIRP |
| SLC29A2 | 1.11e+03 | 1.17e+00 | 4.21e-01 | 2.79e+00 | 5.35e-03 | 1.46e-02 | CHOL |
| Differentially expressed gene analysis between tumor female and normal female samples. |
 |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| SLC29A2 | 7.43e+02 | 1.08e+00 | 2.11e-01 | 5.14e+00 | 2.73e-07 | 1.58e-06 | LIHC |
| SLC29A2 | 1.47e+03 | 1.52e+00 | 3.03e-01 | 5.00e+00 | 5.59e-07 | 5.26e-06 | READ |
Top |
Sex-biased somatic mutation for SLC29A2 |
| ∗For more information on exon skipping events please check the ExonskipDB database. |
| Gene ID | Cancer Type | Hugo Symbol | Male | Female | pval | or | ci.up | ci.low | adjPval |
Top |
DNA methylation with beta values for SLC29A2 |
| Landscape of DNA methylation across multiple cancer types. |
 |
| Differentially expressed CpG sites between male tumor and female tumor patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| Differentially expressed CpG sites between male tumor and male normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| LUSC | cg23250019 | chr11:66371001 | CGI:chr11:66371335-66372258 | promoter,gene body | 5.16e-01 | 6.74e-01 | -2.97e+00 | 3.00e-03 | 5.60e-03 | -1.58e-01 |
| CHOL | cg18002602 | chr11:66370978 | CGI:chr11:66371335-66372258 | promoter,gene body | 1.48e-01 | 2.72e-01 | -2.65e+00 | 7.96e-03 | 1.92e-02 | -1.25e-01 |
| CHOL | cg23250019 | chr11:66371001 | CGI:chr11:66371335-66372258 | promoter,gene body | 4.25e-01 | 7.52e-01 | -3.32e+00 | 9.08e-04 | 1.01e-02 | -3.26e-01 |
| Differentially expressed CpG sites between female tumor and female normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| BRCA | cg23250019 | chr11:66371001 | CGI:chr11:66371335-66372258 | promoter,gene body | 5.51e-01 | 6.93e-01 | -7.60e+00 | 2.95e-14 | 1.02e-13 | -1.41e-01 |
| KIRP | cg18002602 | chr11:66370978 | CGI:chr11:66371335-66372258 | promoter,gene body | 3.24e-01 | 2.09e-01 | 2.25e+00 | 2.46e-02 | 3.07e-02 | 1.16e-01 |
Top |
Exon skipping events with PSI in TCGA for SLC29A2 |
| ∗Please access ExonSkipDB for exon skipping annotation. |
| Landscape of exon skipping events across multiple cancer types. |
 |
| Differentially expressed exon skipping events between male tumor and female tumor patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
| Differentially expressed exon skipping events between male tumor and male normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
| Differentially expressed exon skipping events between female tumor and female normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
Top |
RNA A-to-I editing events in TCGA for SLC29A2 |
| ∗Please access CAeditome for RNA editing annotation. |
| Differentially expressed RNA editing events between male tumor and female tumor patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| Differentially expressed RNA editing events between male tumor and male normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| Differentially expressed RNA editing events between female tumor and female normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| Protein coding RNA editing(s). |
| Editing Position | Variant Type | Gene Symbol | Transcript ID | NTchange | AAchange |
Top |
Sex-biased TF-Gene network for SLC29A2 |
| TFs related to SLC29A2. ∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
| Cancer Type | TF | Target Gene | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| SLC29A2 related gene. ∗Only the gene encode TF might with this result. ∗For more information please check Sex-biased TF-Coding gene network. |
Top |
Sex-biased RBP-ES network for SLC29A2 |
| RBPs related to ES in SLC29A2. ∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
 |
| Cancer Type | RBP | Target ES | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| STAD | SAMD4A | exon_skip_74673 | 7.95e+00 | 9.91e-01 | 7.26e+00 | 8.04e-04 | Male-biased |
| STAD | ZC3H10 | exon_skip_74673 | 8.28e+00 | 9.88e-01 | 7.86e+00 | 5.02e-03 | Male-biased |
| LUSC | SRSF7 | exon_skip_74613 | 9.47e+00 | 4.61e-03 | 9.90e+00 | 9.93e-01 | Female-biased |
| LUSC | ZNF638 | exon_skip_74613 | 1.25e+01 | 2.27e-03 | 1.30e+01 | 9.97e-01 | Female-biased |
| COAD | SAMD4A | exon_skip_74673 | 7.54e+00 | 9.88e-01 | 7.06e+00 | 2.26e-03 | Male-biased |
| COAD | SRSF7 | exon_skip_74613 | 9.40e+00 | 4.07e-03 | 9.82e+00 | 9.94e-01 | Female-biased |
| COAD | ZNF638 | exon_skip_74613 | 1.23e+01 | 9.92e-04 | 1.28e+01 | 9.99e-01 | Female-biased |
| LUAD | SRSF7 | exon_skip_74613 | 9.62e+00 | 4.20e-03 | 1.00e+01 | 9.94e-01 | Female-biased |
| LUAD | ZNF638 | exon_skip_74613 | 1.24e+01 | 1.24e-03 | 1.29e+01 | 9.98e-01 | Female-biased |
| BRCA | ZNF638 | exon_skip_74613 | 1.28e+01 | 9.86e-01 | 1.23e+01 | 1.36e-02 | Male-biased |
| ESCA | SAMD4A | exon_skip_74673 | 7.37e+00 | 9.84e-01 | 6.86e+00 | 5.92e-03 | Male-biased |
| ESCA | ZC3H10 | exon_skip_74673 | 8.04e+00 | 9.85e-01 | 7.54e+00 | 6.61e-03 | Male-biased |
| THCA | SRSF7 | exon_skip_74613 | 9.44e+00 | 2.21e-03 | 9.87e+00 | 9.96e-01 | Female-biased |
| THCA | ZNF638 | exon_skip_74613 | 1.23e+01 | 4.17e-04 | 1.29e+01 | 9.99e-01 | Female-biased |
| KICH | SAMD4A | exon_skip_74673 | 7.17e+00 | 9.87e-01 | 6.40e+00 | 2.07e-04 | Male-biased |
| KICH | SRSF7 | exon_skip_74613 | 9.42e+00 | 6.16e-03 | 9.78e+00 | 9.92e-01 | Female-biased |
| KICH | ZC3H10 | exon_skip_74673 | 7.92e+00 | 9.88e-01 | 7.47e+00 | 2.79e-03 | Male-biased |
| KICH | ZNF638 | exon_skip_74613 | 1.22e+01 | 9.02e-04 | 1.27e+01 | 9.99e-01 | Female-biased |
| SLC29A2 related ES. ∗Only the gene encode RBP might with this result. ∗For more information please check Sex-biased RBP-ES network in cancer. |
Top |
Sex-biased CeRNA regulation of gene |
| Sex-biased CeRNA regulation of gene. |
| Gene ID | ceRNA(lncRNA-miRNA-mRNA) | Group | Cancer Type |
| ENSG00000174669 | PWRN1,hsa-mir-1251,SLC29A2 | Male-specific ceRNA | TCGA-KIRP |
| ENSG00000174669 | AC006116.6,hsa-mir-1251,SLC29A2 | Male-specific ceRNA | TCGA-KIRP |
| ENSG00000174669 | ZIM2-AS1,hsa-mir-3065,SLC29A2 | Male-specific ceRNA | TCGA-KIRP |
| ENSG00000174669 | AL158055.1,hsa-mir-3065,SLC29A2 | Male-specific ceRNA | TCGA-KIRP |
| ENSG00000174669 | LINC02649,hsa-mir-3065,SLC29A2 | Male-specific ceRNA | TCGA-KIRP |
| ENSG00000174669 | Z95331.1,hsa-mir-3065,SLC29A2 | Male-specific ceRNA | TCGA-KIRP |
| ENSG00000174669 | LINC02038,hsa-mir-3065,SLC29A2 | Male-specific ceRNA | TCGA-KIRP |
| ENSG00000174669 | AC010327.5,hsa-mir-3065,SLC29A2 | Female-specific ceRNA | TCGA-LIHC |
Top |
Sex-biased eQTL regulation of gene |
| Sex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| eQTL | Description |
| Male-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs11236084 | chr11:74381574:T:C | - | 0.0767134308577962 | 0.018764644952197 | LGG | Female-baised eQTL |
| rs11236095 | chr11:74396099:A:T | - | 0.0726274302169811 | 0.0263182549332515 | LGG | Female-baised eQTL |
| rs630078 | chr11:74393463:T:C | - | -0.0643778170656923 | 0.0270242977314425 | LGG | Female-baised eQTL |
| rs11236082 | chr11:74377496:G:T | - | 0.0684886806366442 | 0.0450274902209702 | LGG | Female-baised eQTL |
| rs11236083 | chr11:74379294:C:T | - | 0.0684886806366442 | 0.0450274902209702 | LGG | Female-baised eQTL |
| rs12225215 | chr11:74380678:T:A | - | 0.0684886806366442 | 0.0450274902209702 | LGG | Female-baised eQTL |
| Female-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs80059678 | chr11:68198811:C:G | - | 0.0754944289728423 | 0.0470589985977724 | LIHC | Male-baised eQTL |
| rs76181394 | chr11:68198818:T:C | - | 0.0754944289728423 | 0.0470589985977724 | LIHC | Male-baised eQTL |
| rs74812184 | chr11:68198822:C:T | - | 0.0754944289728423 | 0.0470589985977724 | LIHC | Male-baised eQTL |
| rs113095520 | chr11:68198830:A:C | - | 0.0754944289728423 | 0.0470589985977724 | LIHC | Male-baised eQTL |
| rs12809033 | chr11:68205747:A:C | - | 0.0754944289728423 | 0.0470589985977724 | LIHC | Male-baised eQTL |
| rs71464345 | chr11:68207885:G:T | - | 0.0754944289728423 | 0.0470589985977724 | LIHC | Male-baised eQTL |
| rs75480561 | chr11:68208088:C:G | - | 0.0754944289728423 | 0.0470589985977724 | LIHC | Male-baised eQTL |
| rs71459692 | chr11:68208417:C:T | - | 0.0754944289728423 | 0.0470589985977724 | LIHC | Male-baised eQTL |
| rs11228164 | chr11:68214082:G:A | - | 0.0749311168845586 | 0.0499006086697129 | LIHC | Male-baised eQTL |
| rs76833902 | chr11:68214903:G:C | - | 0.0749311168845586 | 0.0499006086697129 | LIHC | Male-baised eQTL |
| rs61897372 | chr11:75440328:G:A | - | 0.14820452150822 | 0.00601907026602293 | BLCA | Male-baised eQTL |
| rs3808969 | chr11:68005259:A:G | - | -0.0715129023426812 | 0.0169688063986539 | COAD | Male-baised eQTL |
| rs3751085 | chr11:68002914:C:T | - | -0.0704349805106184 | 0.0197008720929492 | COAD | Male-baised eQTL |
| rs12284381 | chr11:62228850:T:C | - | -0.0575857949679516 | 0.0198279086237633 | COAD | Male-baised eQTL |
| rs72917359 | chr11:62252965:C:T | - | -0.0600707864923458 | 0.0283184154488544 | COAD | Male-baised eQTL |
| rs732934 | chr11:71475430:G:A | - | -0.0584701317248784 | 0.0284115070719767 | COAD | Male-baised eQTL |
| rs11228120 | chr11:68001326:T:C | - | -0.0681839317002697 | 0.0301582053383308 | COAD | Male-baised eQTL |
| rs11600860 | chr11:71452973:T:C | - | -0.0586455477540877 | 0.0303745464275203 | COAD | Male-baised eQTL |
| rs11606611 | chr11:71453000:C:G | - | -0.0586455477540877 | 0.0303745464275203 | COAD | Male-baised eQTL |
| rs11606612 | chr11:71453001:C:A | - | -0.0586455477540877 | 0.0303745464275203 | COAD | Male-baised eQTL |
| rs11606631 | chr11:71453075:C:A | - | -0.0586455477540877 | 0.0303745464275203 | COAD | Male-baised eQTL |
| rs12789751 | chr11:71453425:G:A | - | -0.0586455477540877 | 0.0303745464275203 | COAD | Male-baised eQTL |
| rs12791871 | chr11:71453498:A:C | - | -0.0586455477540877 | 0.0303745464275203 | COAD | Male-baised eQTL |
| rs4488226 | chr11:71453919:T:A | - | -0.0586455477540877 | 0.0303745464275203 | COAD | Male-baised eQTL |
| rs7944926 | chr11:71454579:A:G | - | -0.0586455477540877 | 0.0303745464275203 | COAD | Male-baised eQTL |
| rs12790010 | chr11:71459607:T:C | - | -0.0585858094559718 | 0.0306620611817826 | COAD | Male-baised eQTL |
| rs12806844 | chr11:71459724:G:A | - | -0.0585858094559718 | 0.0306620611817826 | COAD | Male-baised eQTL |
| rs12790558 | chr11:71459859:T:C | - | -0.0585858094559718 | 0.0306620611817826 | COAD | Male-baised eQTL |
| rs11233747 | chr11:71460596:G:A | - | -0.0585858094559718 | 0.0306620611817826 | COAD | Male-baised eQTL |
| rs12793224 | chr11:71457664:G:A | - | -0.0585291434963741 | 0.0309482517730819 | COAD | Male-baised eQTL |
| rs12794668 | chr11:71457669:C:T | - | -0.0585291434963741 | 0.0309482517730819 | COAD | Male-baised eQTL |
| rs4944958 | chr11:71457027:A:G | - | -0.0585037761562925 | 0.0309789593392954 | COAD | Male-baised eQTL |
| rs10896286 | chr11:67999031:T:G | - | -0.0677772329388153 | 0.0345057218062204 | COAD | Male-baised eQTL |
| rs12808368 | chr11:71459771:C:T | - | -0.0583864523769236 | 0.0359041946733383 | COAD | Male-baised eQTL |
| rs11600569 | chr11:71462701:C:G | - | -0.0576519879606458 | 0.0362201982566897 | COAD | Male-baised eQTL |
| rs7935125 | chr11:71473144:C:A | - | -0.0571741194067145 | 0.0370304435621448 | COAD | Male-baised eQTL |
| rs3794060 | chr11:71476633:C:T | - | -0.0571741194067145 | 0.0370304435621448 | COAD | Male-baised eQTL |
| rs12793530 | chr11:71450610:G:A | - | -0.0574773263788025 | 0.0373206980588486 | COAD | Male-baised eQTL |
| rs11546509 | chr11:71451739:A:G | - | -0.0574773263788025 | 0.0373206980588486 | COAD | Male-baised eQTL |
| rs2002063 | chr11:71452430:T:C | - | -0.0574773263788025 | 0.0373206980588486 | COAD | Male-baised eQTL |
| rs1790340 | chr11:71471543:T:C | - | 0.0697848174688891 | 0.0381221314750999 | COAD | Male-baised eQTL |
| rs1629220 | chr11:71463507:C:T | - | 0.0696418616315264 | 0.0382917342538508 | COAD | Male-baised eQTL |
| rs11233789 | chr11:71470039:A:G | - | -0.0578964796333743 | 0.0391612517365358 | COAD | Male-baised eQTL |
| rs1792315 | chr11:71454501:C:T | - | 0.0686490678751473 | 0.0392298284830037 | COAD | Male-baised eQTL |
| rs12278461 | chr11:71471139:C:T | - | -0.0572613563732201 | 0.0407814857239495 | COAD | Male-baised eQTL |
| rs2282621 | chr11:71472428:C:T | - | -0.0572613563732201 | 0.0407814857239495 | COAD | Male-baised eQTL |
| rs2282620 | chr11:71472431:C:T | - | -0.0572613563732201 | 0.0407814857239495 | COAD | Male-baised eQTL |
| rs1792231 | chr11:71471635:G:A | - | 0.0682239478007823 | 0.041475913789208 | COAD | Male-baised eQTL |
| rs1790339 | chr11:71471715:C:A | - | 0.0682239478007823 | 0.041475913789208 | COAD | Male-baised eQTL |
| rs12785878 | chr11:71456403:G:T | - | -0.0566569658984183 | 0.0421113649660529 | COAD | Male-baised eQTL |
| rs12224205 | chr11:71469946:A:G | - | 0.0679165788658034 | 0.0432380834026212 | COAD | Male-baised eQTL |
| rs1792233 | chr11:71471133:G:A | - | 0.0680401542807664 | 0.0439684864733675 | COAD | Male-baised eQTL |
| rs142902943 | chr11:71464784:A:G | - | 0.0672957686019974 | 0.046060671850604 | COAD | Male-baised eQTL |
| rs1792224 | chr11:71465095:C:T | - | 0.0672957686019974 | 0.046060671850604 | COAD | Male-baised eQTL |
| rs1792226 | chr11:71465528:C:T | - | 0.0672957686019974 | 0.046060671850604 | COAD | Male-baised eQTL |
| rs1790344 | chr11:71465851:A:G | - | 0.0672957686019974 | 0.046060671850604 | COAD | Male-baised eQTL |
| rs1790343 | chr11:71466161:T:C | - | 0.0672957686019974 | 0.046060671850604 | COAD | Male-baised eQTL |
| rs1792227 | chr11:71466366:A:G | - | 0.0672957686019974 | 0.046060671850604 | COAD | Male-baised eQTL |
| rs1790341 | chr11:71466532:T:C | - | 0.0672957686019974 | 0.046060671850604 | COAD | Male-baised eQTL |
| rs1540127 | chr11:71467992:G:A | - | 0.0672957686019974 | 0.046060671850604 | COAD | Male-baised eQTL |
| rs1792235 | chr11:71470427:C:T | - | 0.0672957686019974 | 0.046060671850604 | COAD | Male-baised eQTL |
| rs1619577 | chr11:71470439:C:T | - | 0.0672957686019974 | 0.046060671850604 | COAD | Male-baised eQTL |
| rs1792234 | chr11:71470972:T:C | - | 0.0672957686019974 | 0.046060671850604 | COAD | Male-baised eQTL |
| rs2002064 | chr11:71452374:A:G | - | 0.0674103228441494 | 0.0464651599446507 | COAD | Male-baised eQTL |
| rs4435028 | chr11:71472644:C:A | - | 0.0672118306572665 | 0.0476246261677 | COAD | Male-baised eQTL |
| rs4616066 | chr11:71472800:G:A | - | 0.0672118306572665 | 0.0476246261677 | COAD | Male-baised eQTL |
| rs4402322 | chr11:71472969:C:G | - | 0.0672118306572665 | 0.0476246261677 | COAD | Male-baised eQTL |
| rs2276358 | chr11:71473452:G:A | - | 0.0672118306572665 | 0.0476246261677 | COAD | Male-baised eQTL |
| rs3794057 | chr11:71475698:G:A | - | 0.0672118306572665 | 0.0476246261677 | COAD | Male-baised eQTL |
| rs2017686 | chr11:71476015:C:G | - | 0.0672118306572665 | 0.0476246261677 | COAD | Male-baised eQTL |
| rs1894159 | chr11:62243785:G:A | - | -0.0583986096334627 | 0.0485556320212414 | COAD | Male-baised eQTL |
| Opposite sex-biased eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Sex-biased Gene in Cancer | Cancer Type |
Top |
Sex-biased eQTM regulation of gene |
| Sex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table). |
| eQTM | Description |
 | Gene ID: ENSG00000174669 |
| CpG Site: cg18002602 | |
| Position to Gene: gene,promoter | |
| Male Effect: -0.0735199460273118 | |
| Female Effect: - | |
 | Gene ID: ENSG00000174669 |
| CpG Site: cg23250019 | |
| Position to Gene: gene,promoter | |
| Male Effect: - | |
| Female Effect: -0.465239391878428 |
| Male-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
| cg18002602 | chr11:66370978 | gene,promoter | -0.0735199460273118 | 5.85805277230896e-06 | -0.3802889831224562 | 2.5688416799572932e-08 | KIRP |
| Female-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
| cg23250019 | chr11:66371001 | gene,promoter | -0.465239391878428 | 2.26815834979228e-16 | -0.7393245224239612 | 1.3022829977379503e-20 | KIRC |
| Opposite sex-biased eQTM regulation. |
| CpG Site | CpG Postion | CpG Island | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Male Cor | Male P-value | Female Cor | Female P-value | Sex-biased Coding Gene | Cancer Type |
Top |
Sex-biased sQTL regulation of gene |
| Sex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTL | Description |
| Male-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
| exon_skip_74632 | chr11:66366430:66366564 | Frame-shift | rs74788170 | chr11:66810462:A:G | Distant upstream | -0.0444670910317404 | 0.00304024099431505 | THCA | Female-baised sQTL |
| exon_skip_74632 | chr11:66366430:66366564 | Frame-shift | rs76693359 | chr11:66882126:T:G | Distant upstream | -0.0404165105209182 | 0.0208570904114362 | THCA | Female-baised sQTL |
| exon_skip_74632 | chr11:66366430:66366564 | Frame-shift | rs139622960 | chr11:66520115:G:A | Distant upstream | -0.0377657122739891 | 0.0309157337425563 | THCA | Female-baised sQTL |
| exon_skip_74632 | chr11:66366430:66366564 | Frame-shift | rs5006008 | chr11:67063089:A:T | Distant upstream | 0.034453418603624 | 0.0258653366719944 | COAD | Female-baised sQTL |
| exon_skip_74678 | chr11:66371243:66371325 | Frame-shift | rs1151537 | chr11:66195121:G:A | Distant downstream | -0.0301460700226922 | 0.0407940750936714 | COAD | Female-baised sQTL |
| Female-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
| exon_skip_74632 | chr11:66366430:66366564 | Frame-shift | rs76878669 | chr11:66325096:C:G | Distant downstream | -0.0291346494313114 | 0.0253407512412351 | LUSC | Male-baised sQTL |
| exon_skip_74632 | chr11:66366430:66366564 | Frame-shift | rs1785633 | chr11:66340056:C:A | Distant downstream | 0.0242569972155465 | 0.0465539108279598 | LUSC | Male-baised sQTL |
| exon_skip_74632 | chr11:66366430:66366564 | Frame-shift | rs947978 | chr11:66341189:C:T | Distant downstream | 0.0242569972155465 | 0.0465539108279598 | LUSC | Male-baised sQTL |
| exon_skip_74632 | chr11:66366430:66366564 | Frame-shift | rs1892940 | chr11:66343780:C:T | Distant downstream | 0.0242569972155465 | 0.0465539108279598 | LUSC | Male-baised sQTL |
| exon_skip_74632 | chr11:66366430:66366564 | Frame-shift | rs17854357 | chr11:65834089:G:C | Distant downstream | -0.0416261772053845 | 0.048680329345238 | STAD | Male-baised sQTL |
| Opposite sex-biased sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Male Effect | Male FDR | Female Effect | Female FDR | Cancer Type |
Top |
Sex-biased sQTM regulation of gene |
| Sex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTM | Description |
| Male-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
| Female-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
| Opposite sex-biased sQTM regulation. |
| EX ID | EX Info | Skipped Exon | CPG Site | CPG Position | CPG Island | Position to EX Events | Male Effect | Male FDR | Female Effect | Female FDR | Male Correlation | Male P-value | Female Correlation | Female P-value | ORF_anno | Cancer Type |
Top |
Related disease information of SLC29A2 |
| Diseases associated with this gene (DisGeNET). |
| Gene ID | Gene Symbol | Disease ID | Disease Name | Number of PMID | Source |
