SexAnnoDB Logo

Home

Download

Statistics

Examples

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Gene structure and Gene expression level

leaf

Sex-biased somatic mutation

leaf

DNA methylation with beta values in gene

leaf

Exon skipping events with PSI in TCGA

leaf

RNA A-to-I editing events in TCGA

leaf

Sex-biased TF-Gene network of gene

leaf

Sex-biased RBP-ES network of gene

leaf

Sex-biased CeRNA regulation of gene

leaf

Sex-biased eQTL regulation of gene

leaf

Sex-biased eQTM regulation of gene

leaf

Sex-biased sQTL regulation of gene

leaf

Sex-biased sQTM regulation of gene

leaf

Related disease information of gene

Gene: ENSG00000171490

Summary for RSL1D1

check button Gene summary

Gene informationEnsembl ID

ENSG00000171490

Gene symbol

RSL1D1

Gene nameribosomal L1 domain containing 1
HGNC

24534

Entrez ID

26156

Gene typeprotein_coding
SynonymsRSL1D1|PBK1|L12|DKFZP564M182|CSIG|UTP30
UniProtAcc

O76021


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

Top

Structure and expression level for RSL1D1

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

Top

Sex-biased somatic mutation for RSL1D1

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

Top

DNA methylation with beta values for RSL1D1

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
KIRCcg05852052chr16:11852258CGI:chr16:11851208-11851660promoter2.85e-011.84e-012.92e+003.48e-034.67e-031.01e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

Top

Exon skipping events with PSI in TCGA for RSL1D1

∗Please access ExonSkipDB for exon skipping annotation.
check buttonLandscape of exon skipping events across multiple cancer types.
AS event heatmap

check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

Top

RNA A-to-I editing events in TCGA for RSL1D1

∗Please access CAeditome for RNA editing annotation.
check buttonLandscape of RNA editing events across multiple cancer types.
ED heatmap

check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre
KIRCRSL1D1-001chr16_11835320_-2.25e-012.01e-012.49e+001.28e-024.28e-022.44e-02
KIRCRSL1D1-001chr16_11835346_-2.64e-012.36e-012.50e+001.22e-024.23e-022.77e-02
KIRCRSL1D1-001chr16_11835590_-1.41e-011.31e-012.01e+004.47e-024.96e-029.08e-03
LUADRSL1D1-001chr16_11834963_-1.84e-012.22e-01-2.37e+001.77e-023.62e-02-3.82e-02
LGGRSL1D1-001chr16_11835094_-2.88e-012.68e-012.08e+003.74e-024.81e-022.00e-02
THCARSL1D1-001chr16_11834963_-1.97e-011.51e-012.86e+004.25e-034.77e-024.54e-02
THCARSL1D1-001chr16_11835350_-1.79e-011.53e-012.21e+002.71e-024.91e-022.60e-02
THCARSL1D1-001chr16_11835626_-1.56e-011.37e-012.81e+004.99e-034.77e-021.93e-02
HNSCRSL1D1-001chr16_11835094_-3.72e-013.99e-01-2.03e+004.19e-024.72e-02-2.62e-02
LUSCRSL1D1-001chr16_11835320_-2.26e-011.96e-012.11e+003.50e-024.91e-023.00e-02
LUSCRSL1D1-001chr16_11835626_-1.39e-011.72e-01-3.22e+001.28e-034.91e-02-3.30e-02
STADRSL1D1-001chr16_11834869_-2.47e-011.58e-011.98e+004.81e-024.96e-028.89e-02
READRSL1D1-001chr16_11835320_-2.99e-012.19e-012.11e+003.48e-024.94e-027.98e-02
READRSL1D1-001chr16_11835346_-2.31e-013.41e-01-2.34e+001.91e-024.85e-02-1.09e-01

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre
KIRCRSL1D1-001chr16_11834868_-2.23e-011.88e-012.34e+001.95e-022.79e-023.48e-02
KIRCRSL1D1-001chr16_11834879_-2.79e-012.33e-013.32e+008.89e-043.41e-034.61e-02
KIRCRSL1D1-001chr16_11835094_-4.20e-013.67e-012.91e+003.59e-039.10e-035.36e-02
KIRCRSL1D1-001chr16_11835346_-2.64e-012.17e-012.47e+001.37e-022.20e-024.64e-02
HNSCRSL1D1-001chr16_11834868_-2.15e-011.52e-012.18e+002.95e-023.30e-026.28e-02
HNSCRSL1D1-001chr16_11835346_-2.17e-011.44e-012.04e+004.11e-024.27e-027.26e-02
LUSCRSL1D1-001chr16_11834879_-2.42e-011.89e-012.40e+001.64e-022.61e-025.31e-02
LUSCRSL1D1-001chr16_11834989_-5.64e-014.77e-013.82e+001.35e-041.32e-038.76e-02
LUSCRSL1D1-001chr16_11835320_-2.26e-011.57e-012.07e+003.86e-024.30e-026.92e-02
COADRSL1D1-001chr16_11835094_-3.32e-012.45e-012.51e+001.20e-021.94e-028.70e-02
LIHCRSL1D1-001chr16_11834956_-2.37e-011.59e-012.41e+001.61e-023.45e-027.87e-02
LIHCRSL1D1-001chr16_11834963_-2.43e-011.40e-012.97e+002.99e-032.14e-021.04e-01
LIHCRSL1D1-001chr16_11835094_-5.12e-014.32e-012.05e+004.00e-024.64e-028.04e-02
ESCARSL1D1-001chr16_11834989_-6.23e-013.83e-013.75e+001.78e-045.37e-032.40e-01
KICHRSL1D1-001chr16_11835002_-1.66e-011.36e-012.05e+004.04e-024.41e-023.01e-02

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre
BRCARSL1D1-001chr16_11834868_-2.31e-011.67e-015.97e+002.31e-091.34e-086.44e-02
BRCARSL1D1-001chr16_11834879_-2.45e-011.97e-014.12e+003.81e-051.05e-044.75e-02
BRCARSL1D1-001chr16_11834963_-2.03e-011.33e-012.36e+001.84e-022.29e-026.94e-02
BRCARSL1D1-001chr16_11834989_-6.72e-015.60e-018.76e+001.90e-183.84e-171.11e-01
BRCARSL1D1-001chr16_11835002_-1.83e-011.41e-014.42e+009.86e-063.07e-054.15e-02
BRCARSL1D1-001chr16_11835094_-4.85e-013.22e-019.11e+008.47e-202.04e-181.63e-01
BRCARSL1D1-001chr16_11835320_-2.66e-011.59e-016.52e+006.96e-115.15e-101.07e-01
BRCARSL1D1-001chr16_11835346_-3.12e-011.76e-018.22e+001.96e-163.10e-151.36e-01
THCARSL1D1-001chr16_11835320_-2.42e-011.80e-012.77e+005.58e-031.16e-026.21e-02
BLCARSL1D1-001chr16_11835094_-3.89e-012.25e-012.74e+006.11e-033.32e-021.64e-01
STADRSL1D1-001chr16_11834989_-6.04e-014.59e-012.14e+003.22e-024.29e-021.45e-01
LIHCRSL1D1-001chr16_11835590_-1.94e-011.38e-012.27e+002.33e-023.97e-025.54e-02

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

Top

Sex-biased TF-Gene network for RSL1D1

check buttonTFs related to RSL1D1.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
TF Gene
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
BLCASP1RSL1D14.15e+009.85e-012.99e+002.82e-03Male-biased
BLCAZNF30RSL1D14.14e+009.82e-013.20e+005.82e-03Male-biased
BLCAZNF441RSL1D14.20e+009.82e-013.31e+007.03e-03Male-biased
BLCAZNF571RSL1D14.08e+009.81e-013.10e+005.05e-03Male-biased
BRCAZNF235RSL1D14.71e+009.82e-013.54e+001.21e-02Male-biased
ESCANRF1RSL1D14.48e+009.83e-013.79e+001.16e-02Male-biased
LAMLALX1RSL1D14.85e+009.84e-013.96e+001.09e-02Male-biased
LAMLALX4RSL1D15.16e+009.81e-014.37e+001.59e-02Male-biased
LAMLFOXA2RSL1D14.52e+009.85e-013.46e+005.93e-03Male-biased
LAMLFOXB1RSL1D14.70e+009.89e-013.58e+004.69e-03Male-biased
LAMLHNF1ARSL1D14.65e+009.80e-013.79e+001.25e-02Male-biased
LAMLNEUROD1RSL1D14.88e+009.81e-014.05e+001.37e-02Male-biased
LAMLNKX3-1RSL1D15.02e+009.87e-014.09e+009.33e-03Male-biased
LAMLPHOX2BRSL1D14.99e+009.82e-014.15e+001.34e-02Male-biased
LAMLTBPRSL1D14.67e+009.80e-013.82e+001.29e-02Male-biased
LAMLUNCXRSL1D15.03e+009.81e-014.23e+001.54e-02Male-biased
LAMLZNF25RSL1D14.73e+009.89e-013.61e+004.64e-03Male-biased
LAMLZNF584RSL1D14.46e+009.81e-013.53e+009.11e-03Male-biased
LAMLZNF879RSL1D14.80e+009.85e-013.87e+009.51e-03Male-biased

check buttonRSL1D1 related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

Top

Sex-biased RBP-ES network for RSL1D1

check buttonRBPs related to ES in RSL1D1.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
RBP ES
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
UVMRBM5exon_skip_1420029.39e+009.84e-019.11e+001.31e-02Male-biased
PCPGRBM5exon_skip_1420029.34e+009.83e-019.04e+001.34e-02Male-biased
KIRCSRSF2exon_skip_1419919.00e+009.81e-018.72e+001.45e-02Male-biased

check buttonRSL1D1 related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

Top

Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

Top

Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs2545886chr16:21017875:A:G-0.2349723514078940.00644704964748077GBMFemale-baised eQTL
rs330150chr16:21039887:G:C-0.2248302160764780.0237508507867728GBMFemale-baised eQTL
rs276639chr16:13085159:G:A-0.1931821432411980.0319944539600839GBMFemale-baised eQTL
rs276638chr16:13085864:C:G-0.1931821432411980.0319944539600839GBMFemale-baised eQTL
rs276608chr16:13079905:T:G-0.1881668651565450.0470813313238926GBMFemale-baised eQTL
rs276603chr16:13081132:T:C-0.1881668651565450.0470813313238926GBMFemale-baised eQTL
rs276642chr16:13083650:A:G-0.2043907802264120.0497495002751568GBMFemale-baised eQTL
rs3104704chr16:9974095:A:G--0.1832157320320120.0151482172103147KIRPFemale-baised eQTL
rs3104707chr16:9977301:A:G--0.164184815304270.0195184443550363KIRPFemale-baised eQTL
rs1650409chr16:10269565:C:T--0.2194195304187050.0229431757032231KIRPFemale-baised eQTL
rs3105687chr16:9970112:A:G--0.1744157858298170.0331233233639778KIRPFemale-baised eQTL
rs2650422chr16:9994603:G:C--0.1697124037066370.0419010446150605KIRPFemale-baised eQTL
rs73511456chr16:11311571:C:T-0.1468778249596370.0434076309468483KIRPFemale-baised eQTL
rs929879chr16:11312284:G:A-0.1468778249596370.0434076309468483KIRPFemale-baised eQTL
rs3790125chr16:10530721:A:G-0.1867460110721110.0231206399134238LUSCFemale-baised eQTL
rs3790124chr16:10530722:G:A-0.1867460110721110.0231206399134238LUSCFemale-baised eQTL
rs10459782chr16:10531318:G:A-0.1867460110721110.0231206399134238LUSCFemale-baised eQTL
rs2047923chr16:10532332:G:A-0.1948954803995320.0231751386411414LUSCFemale-baised eQTL
rs12051183chr16:10533648:G:C-0.1913767496504580.0234263455068227LUSCFemale-baised eQTL
rs3790127chr16:10530585:T:C-0.1838790285536230.0292329179959032LUSCFemale-baised eQTL
rs9972772chr16:10527165:C:G-0.1816692639677930.0408664413611652LUSCFemale-baised eQTL
rs9972773chr16:10527233:C:T-0.1816692639677930.0408664413611652LUSCFemale-baised eQTL
rs3892151chr16:10527407:T:C-0.1816692639677930.0408664413611652LUSCFemale-baised eQTL
rs4786076chr16:6026016:C:T-0.08552161815018010.0363059083139328KIRCFemale-baised eQTL
rs4781282chr16:12593727:G:A-0.05585873840294340.00368338333960114LUADFemale-baised eQTL
rs112827123chr16:12595135:T:C-0.05300216546564410.00955917947970808LUADFemale-baised eQTL
rs80226234chr16:12595096:A:C-0.05296261910099620.00966391113487347LUADFemale-baised eQTL
rs75253185chr16:12596272:C:G-0.05433735951656580.0197889092833011LUADFemale-baised eQTL
rs6498332chr16:12600423:G:A-0.05255148801810430.0209754835507678LUADFemale-baised eQTL
rs7192728chr16:12601092:T:C-0.05255148801810430.0209754835507678LUADFemale-baised eQTL
rs6498331chr16:12599325:A:T-0.05255755771601070.0210397192480552LUADFemale-baised eQTL
rs9927427chr16:12597926:T:A-0.05251578911267470.021145206135593LUADFemale-baised eQTL
rs4780461chr16:12599011:A:G-0.05251578911267470.021145206135593LUADFemale-baised eQTL
rs6498329chr16:12599212:T:C-0.05251578911267470.021145206135593LUADFemale-baised eQTL
rs138281351chr16:12595995:G:A-0.0510283389275750.0277858105089002LUADFemale-baised eQTL
rs150976917chr16:12596456:T:A-0.0510283389275750.0277858105089002LUADFemale-baised eQTL
rs8063491chr16:12597281:G:C-0.05057678072331610.0290295247553117LUADFemale-baised eQTL
rs75525228chr16:12595114:G:A-0.04879791503816010.0290333101148666LUADFemale-baised eQTL
rs7184622chr16:5841783:C:G-0.04805247798465310.0351734497224439LUADFemale-baised eQTL
rs4781292chr16:12597796:C:T-0.05001953722992250.0379429629505528LUADFemale-baised eQTL
rs4781291chr16:12597675:G:A-0.04872587063965060.0404147797183535LUADFemale-baised eQTL
rs4781284chr16:12593865:C:T-0.04929812099144280.0418286782133096LUADFemale-baised eQTL
rs9652603chr16:11450151:A:G--0.06458531418580090.0425322546266649LUADFemale-baised eQTL
rs7203183chr16:12593091:C:A-0.04878602564716560.0451224742669909LUADFemale-baised eQTL
rs10454063chr16:12594229:A:C-0.04878602564716560.0451224742669909LUADFemale-baised eQTL
rs77326840chr16:12595795:T:C-0.04878602564716560.0451224742669909LUADFemale-baised eQTL
rs9934480chr16:11448645:C:T--0.06322181371505720.049442458393162LUADFemale-baised eQTL
rs4303499chr16:11448656:A:G--0.06322181371505720.049442458393162LUADFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs28553505chr16:4108538:C:G-0.09645522249759640.0334545755151181HNSCMale-baised eQTL
rs4787162chr16:8240103:G:A-0.04079696920599180.0219447079408214LUSCMale-baised eQTL
rs11649529chr16:19199952:C:T-0.05818499319683040.0270179232409721BLCAMale-baised eQTL
rs8046046chr16:8801499:A:T--0.08043455028286170.0495303031043833BLCAMale-baised eQTL
rs7192073chr16:8807875:A:C--0.08043455028286170.0495303031043833BLCAMale-baised eQTL
rs62017996chr16:8220044:A:G-0.05995699602778590.0156249373411356LUADMale-baised eQTL
rs12149640chr16:8211315:G:A-0.05570317046420840.0318400617669208LUADMale-baised eQTL
rs12928189chr16:7546177:A:G--0.06882325103056940.00403929410542029COADMale-baised eQTL
rs1395585chr16:7544956:G:A--0.07057474155027450.00977374041073958COADMale-baised eQTL
rs1507025chr16:7539229:A:G-0.06754046861319020.022547128440183COADMale-baised eQTL
rs8060394chr16:7539187:T:C--0.06229738924362410.0281429573627819COADMale-baised eQTL
rs755385chr16:19340971:T:C--0.07371408305246830.03109202180383COADMale-baised eQTL
rs12933105chr16:7525286:T:C--0.05197425900855470.0384379687992088COADMale-baised eQTL
rs2907344chr16:7760346:G:A-0.05790034095270520.0391618518094925COADMale-baised eQTL
rs1981763chr16:11587866:T:C--0.06626308071423920.0483527536111403COADMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

Top

Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription
eQTM boxplot analysisGene ID: ENSG00000171490
CpG Site: cg02740093
Position to Gene: gene,exon,UTR
Male Effect: -0.422501105383884
Female Effect: -

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type
cg02740093chr16:11836532gene,exon,UTR-0.4225011053838847.95466739699837e-14-0.51907143335772421.0287740725985842e-16LUAD

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

Top

Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

Top

Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

Top

Related disease information of RSL1D1

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource