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Center for Computational Systems Medicine
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Gene summary

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Gene structure and Gene expression level

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Sex-biased somatic mutation

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DNA methylation with beta values in gene

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Exon skipping events with PSI in TCGA

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RNA A-to-I editing events in TCGA

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Sex-biased TF-Gene network of gene

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Sex-biased RBP-ES network of gene

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Sex-biased CeRNA regulation of gene

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Sex-biased eQTL regulation of gene

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Sex-biased eQTM regulation of gene

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Sex-biased sQTL regulation of gene

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Sex-biased sQTM regulation of gene

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Related disease information of gene

Gene: ENSG00000169032

Summary for MAP2K1

check button Gene summary

Gene informationEnsembl ID

ENSG00000169032

Gene symbol

MAP2K1

Gene namemitogen-activated protein kinase kinase 1
HGNC

6840

Entrez ID

5604

Gene typeprotein_coding
SynonymsMAP2K1|MEK1|MAPKK1
UniProtAcc

Q02750


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type
ENSG00000169032MAP2K1DB02152K-252aSmallMoleculeDrug
ENSG00000169032MAP2K1DB031155-Bromo-N-[(2S)-2,3-dihydroxypropoxy]-3,4-difluoro-2-[(2-fluoro-4-iodophenyl)amino]benzamideSmallMoleculeDrug
ENSG00000169032MAP2K1DB05239CobimetinibSmallMoleculeDrug
ENSG00000169032MAP2K1DB06616BosutinibSmallMoleculeDrug
ENSG00000169032MAP2K1DB06892(5S)-4,5-difluoro-6-[(2-fluoro-4-iodophenyl)imino]-N-(2-hydroxyethoxy)cyclohexa-1,3-diene-1-carboxamideSmallMoleculeDrug
ENSG00000169032MAP2K1DB070462-[(2-chloro-4-iodophenyl)amino]-N-{[(2R)-2,3-dihydroxypropyl]oxy}-3,4-difluorobenzamideSmallMoleculeDrug
ENSG00000169032MAP2K1DB07101PD-0325901SmallMoleculeDrug
ENSG00000169032MAP2K1DB08130N-(5-{3,4-difluoro-2-[(2-fluoro-4-iodophenyl)amino]phenyl}-1,3,4-oxadiazol-2-yl)ethane-1,2-diamineSmallMoleculeDrug
ENSG00000169032MAP2K1DB082082-[(4-ETHYNYL-2-FLUOROPHENYL)AMINO]-3,4-DIFLUORO-N-(2-HYDROXYETHOXY)BENZAMIDESmallMoleculeDrug
ENSG00000169032MAP2K1DB08911TrametinibSmallMoleculeDrug
ENSG00000169032MAP2K1DB11689SelumetinibSmallMoleculeDrug

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer
ENSG00000169032MAP2K1DB05239CobimetinibSmallMoleculeDrugMelanoma
ENSG00000169032MAP2K1DB06616BosutinibSmallMoleculeDrugChronic Myelogenous Leukemia (CML)
ENSG00000169032MAP2K1DB08911TrametinibSmallMoleculeDrugNon-Small Cell Lung Cancer,Melanoma,Melanoma,Treat Solid Tumors Anywhere in the Body,Thyroid Cancer

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Structure and expression level for MAP2K1

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
MAP2K12.55e+03-1.27e+002.58e-01-4.93e+008.13e-075.94e-06CHOL

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

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Sex-biased somatic mutation for MAP2K1

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

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DNA methylation with beta values for MAP2K1

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
LIHCcg08161449chr15:66387338CGI:chr15:66386557-66387625UTR,promoter,exon,gene body2.40e-013.77e-01-5.87e+004.42e-094.15e-08-1.37e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

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Exon skipping events with PSI in TCGA for MAP2K1

∗Please access ExonSkipDB for exon skipping annotation.
check buttonLandscape of exon skipping events across multiple cancer types.
AS event heatmap

check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

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RNA A-to-I editing events in TCGA for MAP2K1

∗Please access CAeditome for RNA editing annotation.
check buttonLandscape of RNA editing events across multiple cancer types.
ED heatmap

check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre
ESCAMAP2K1-001chr15_66448033_+2.53e-011.36e-013.29e+001.00e-034.99e-021.17e-01

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

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Sex-biased TF-Gene network for MAP2K1

check buttonTFs related to MAP2K1.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
TF Gene
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
CHOLPOU3F3MAP2K13.82e+009.82e-012.45e+001.85e-03Male-biased
CHOLPRDM6MAP2K13.84e+009.81e-012.66e+004.05e-03Male-biased
CHOLTBPMAP2K13.90e+009.81e-012.76e+004.80e-03Male-biased
CHOLZNF225MAP2K14.13e+009.89e-012.76e+001.90e-03Male-biased
CHOLZNF235MAP2K14.06e+009.85e-012.92e+005.01e-03Male-biased
CHOLZNF25MAP2K13.79e+009.83e-012.25e+008.47e-04Male-biased
CHOLZNF287MAP2K14.12e+009.87e-012.87e+003.15e-03Male-biased
CHOLZNF418MAP2K14.41e+009.94e-012.09e+002.25e-05Male-biased
CHOLZNF487MAP2K13.90e+009.81e-012.78e+005.35e-03Male-biased
CHOLZNF98MAP2K13.96e+009.81e-012.89e+006.35e-03Male-biased
PAADAIREMAP2K14.53e+009.81e-013.74e+001.24e-02Male-biased
PAADIRF1MAP2K14.17e+009.84e-013.21e+004.99e-03Male-biased
PAADPOU2F2MAP2K14.37e+009.83e-013.51e+008.85e-03Male-biased
PAADPOU3F3MAP2K14.50e+009.90e-013.44e+003.16e-03Male-biased
PAADZNF25MAP2K14.41e+009.90e-013.27e+002.10e-03Male-biased
PAADZNF418MAP2K14.95e+009.95e-013.71e+001.29e-03Male-biased
SARCPOU3F3MAP2K14.42e+009.82e-013.85e+009.39e-03Male-biased
SARCZNF25MAP2K14.27e+009.80e-013.70e+009.33e-03Male-biased
SARCZNF418MAP2K14.97e+009.95e-014.10e+001.66e-03Male-biased
SKCMPOU3F3MAP2K14.07e+007.81e-035.14e+009.87e-01Female-biased
SKCMZNF25MAP2K13.93e+008.63e-034.96e+009.84e-01Female-biased
SKCMZNF418MAP2K14.07e+002.23e-035.54e+009.95e-01Female-biased

check buttonMAP2K1 related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

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Sex-biased RBP-ES network for MAP2K1

check buttonRBPs related to ES in MAP2K1.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
RBP ES
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
UVMNCLexon_skip_1229027.88e+005.48e-038.23e+009.87e-01Female-biased
THYMESRP2exon_skip_1229066.24e+002.56e-036.68e+009.81e-01Female-biased
DLBCMATR3exon_skip_1229201.06e+019.92e-011.03e+017.17e-03Male-biased
CHOLSNRNP70exon_skip_1229067.92e+009.95e-038.33e+009.83e-01Female-biased
BRCAMATR3exon_skip_1229201.04e+019.91e-019.79e+007.39e-03Male-biased
ESCABRUNOL6exon_skip_1228996.99e+009.82e-016.45e+004.98e-03Male-biased
MESOMATR3exon_skip_1229201.01e+015.87e-031.05e+019.93e-01Female-biased
PAADMATR3exon_skip_1229201.02e+014.63e-031.06e+019.94e-01Female-biased

check buttonMAP2K1 related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

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Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

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Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs11856842chr15:61754529:T:C-0.1170827738652560.0336269529726948LUSCFemale-baised eQTL
rs78494976chr15:61799319:T:C-0.1112520261158570.00816648459777432LGGFemale-baised eQTL
rs55927532chr15:61785021:T:G-0.09071239259975050.0373143247005151LGGFemale-baised eQTL
rs59860209chr15:61785022:C:G-0.09071239259975050.0373143247005151LGGFemale-baised eQTL
rs77763799chr15:61785869:G:A-0.08727484906624130.0497249500149469LGGFemale-baised eQTL
rs76137417chr15:61785872:A:C-0.08727484906624130.0497249500149469LGGFemale-baised eQTL
rs7161996chr15:66804855:C:G-0.1346408038322080.0028833563252592LUADFemale-baised eQTL
rs4776858chr15:66947207:A:G--0.05313160509494030.028589406073686LUADFemale-baised eQTL
rs266390chr15:66947783:A:G--0.05192686203317160.0360474300343674LUADFemale-baised eQTL
rs8029328chr15:60274767:C:G-0.06683234244274730.0457642071499069LUADFemale-baised eQTL
rs7495307chr15:66859671:A:G--0.09693391212190880.0493490415093005LUADFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs1466867chr15:69107327:C:A--0.09828907482396820.0335154306711486SARCMale-baised eQTL
rs7183815chr15:75971826:C:T-0.06904659764594020.0381355435405719LGGMale-baised eQTL
rs335706chr15:75908490:C:T-0.06747939282998120.0440672030453316LGGMale-baised eQTL
rs71403522chr15:75915768:C:T-0.06747939282998120.0440672030453316LGGMale-baised eQTL
rs335697chr15:75918026:C:T-0.06747939282998120.0440672030453316LGGMale-baised eQTL
rs335711chr15:75892399:C:T-0.06622707801132570.0483528091720106LGGMale-baised eQTL
rs2469039chr15:75968742:G:A--0.06771875637913470.0488972079311209LGGMale-baised eQTL
rs985849chr15:75969652:C:T--0.06771875637913470.0488972079311209LGGMale-baised eQTL
rs72625744chr15:61389884:A:G-0.05738437611615910.00595868566716938KIRCMale-baised eQTL
rs12439928chr15:61390254:A:C-0.05298786060765590.0154822298986064KIRCMale-baised eQTL
rs78417725chr15:61390668:C:T-0.052139816680960.0189642179895226KIRCMale-baised eQTL
rs8038664chr15:61390735:A:G-0.052139816680960.0189642179895226KIRCMale-baised eQTL
rs7162913chr15:61391843:A:G-0.05151931351356530.0206683425133603KIRCMale-baised eQTL
rs7163299chr15:61392006:A:T-0.05071286656138230.0219170558368917KIRCMale-baised eQTL
rs28721869chr15:65314378:T:C-0.05480601372778910.0256937597575079BLCAMale-baised eQTL
rs949592chr15:69123961:G:T--0.08579409858913280.0263426754316796BLCAMale-baised eQTL
rs2899823chr15:73813670:G:A--0.0853964268981090.0263442144629425BLCAMale-baised eQTL
rs74724610chr15:69125379:A:G--0.0857445099962530.0263925471548516BLCAMale-baised eQTL
rs535406chr15:58417564:T:A--0.0912427263061830.0432981932577044BLCAMale-baised eQTL
rs1372833chr15:65340714:C:T-0.05386111191774410.046933358128357BLCAMale-baised eQTL
rs58254794chr15:64849087:C:T-0.06689610629924350.0238630600904422COADMale-baised eQTL
rs4776637chr15:64853610:A:C-0.06678777383954910.0238907330968079COADMale-baised eQTL
rs4776249chr15:64853612:C:G-0.06678777383954910.0238907330968079COADMale-baised eQTL
rs35646705chr15:64854283:C:T-0.06678777383954910.0238907330968079COADMale-baised eQTL
rs1107529chr15:64857730:C:T-0.06659925971220620.0243453541278172COADMale-baised eQTL
rs12439917chr15:64870575:G:A-0.06261939792225870.036184093903594COADMale-baised eQTL
rs11072213chr15:70675215:G:T--0.0574625194517990.03940916029395COADMale-baised eQTL
rs1719263chr15:64883993:G:T-0.06298464589678930.0394120757473296COADMale-baised eQTL
rs1684032chr15:64893685:G:T-0.06050290032216910.0454397085010369COADMale-baised eQTL
rs1719262chr15:64893705:T:A-0.06050290032216910.0454397085010369COADMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

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Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription
eQTM boxplot analysisGene ID: ENSG00000169032
CpG Site: cg08120210
Position to Gene: gene,enhancer
Male Effect: -
Female Effect: -0.20179256731087

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type
cg08120210chr15:66390395gene,enhancer-0.201792567310871.63294571333304e-07-0.4103734021444831.8817602770763778e-11LUAD

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

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Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

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Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

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Related disease information of MAP2K1

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource
ENSG00000169032MAP2K1C0007786Brain Ischemia1CTD_human
ENSG00000169032MAP2K1C0023443Hairy Cell Leukemia1CTD_human
ENSG00000169032MAP2K1C0025202melanoma1CTD_human
ENSG00000169032MAP2K1C0028326Noonan Syndrome1CTD_human
ENSG00000169032MAP2K1C0041409Turner Syndrome, Male1CTD_human
ENSG00000169032MAP2K1C0041696Unipolar Depression1PSYGENET
ENSG00000169032MAP2K1C0152013Adenocarcinoma of lung (disorder)1CTD_human
ENSG00000169032MAP2K1C0587248Costello syndrome (disorder)1CTD_human
ENSG00000169032MAP2K1C0917798Cerebral Ischemia1CTD_human
ENSG00000169032MAP2K1C1269683Major Depressive Disorder1PSYGENET
ENSG00000169032MAP2K1C1275081Cardio-facio-cutaneous syndrome2CTD_human
ENSG00000169032MAP2K1C1527404Female Pseudo-Turner Syndrome1CTD_human
ENSG00000169032MAP2K1C2063866Depressive Disorder, Treatment-Resistant1PSYGENET
ENSG00000169032MAP2K1C2931456Prostate cancer, familial1CTD_human
ENSG00000169032MAP2K1C4551602Noonan Syndrome 11CTD_human
ENSG00000169032MAP2K1C4722327PROSTATE CANCER, HEREDITARY, 11CTD_human