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Gene: ENSG00000161395 |
Summary for PGAP3 |
Gene summary |
| Gene information | Ensembl ID | ENSG00000161395 | Gene symbol | PGAP3 |
| Gene name | post-GPI attachment to proteins phospholipase 3 | |
| HGNC | 23719 | |
| Entrez ID | 93210 | |
| Gene type | protein_coding | |
| Synonyms | PGAP3|MGC9753|CAB2|PP1498|PER1 | |
| UniProtAcc | Q96FM1 |
Drugs associated with this gene(DrugBank). |
| Gene ID | Gene Symbol | Drug ID | Drug Name | Drug Type |
Cancer therapeutic drugs associated with this gene(NCI). |
| Gene ID | Gene Name | Drug ID | Drug Name | Drug Type | Cancer |
Top |
Structure and expression level for PGAP3 |
AS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.∗For more information on exon skipping events please check the ExonskipDB database. ∗For more information on exon skipping events please check the CAeditome database. |
Landscape of gene expressions across multiple cancer types. |
Differentially expressed gene analysis between tumor male and tumor female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| PGAP3 | 3.97e+03 | 1.19e+00 | 1.52e-01 | 7.83e+00 | 4.84e-15 | 3.55e-12 | STAD |
Differentially expressed gene analysis between tumor male and normal male samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
Differentially expressed gene analysis between tumor female and normal female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| PGAP3 | 5.23e+03 | 1.38e+00 | 1.40e-01 | 9.87e+00 | 5.59e-23 | 2.15e-22 | BRCA |
Top |
Sex-biased somatic mutation for PGAP3 |
| ∗For more information on exon skipping events please check the ExonskipDB database. |
| Gene ID | Cancer Type | Hugo Symbol | Male | Female | pval | or | ci.up | ci.low | adjPval |
Top |
DNA methylation with beta values for PGAP3 |
Landscape of DNA methylation across multiple cancer types. |
Differentially expressed CpG sites between male tumor and female tumor patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| KIRP | cg08585669 | chr17:39696779 | CGI:chr17:39700100-39700638 | UTR,promoter,exon,gene body | 6.03e-01 | 4.98e-01 | 3.11e+00 | 1.86e-03 | 7.36e-03 | 1.04e-01 |
Differentially expressed CpG sites between male tumor and male normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| KIRC | cg08585669 | chr17:39696779 | CGI:chr17:39700100-39700638 | UTR,promoter,exon,gene body | 6.30e-01 | 4.80e-01 | 4.35e+00 | 1.38e-05 | 3.61e-05 | 1.50e-01 |
Differentially expressed CpG sites between female tumor and female normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
Top |
Exon skipping events with PSI in TCGA for PGAP3 |
| ∗Please access ExonSkipDB for exon skipping annotation. |
Landscape of exon skipping events across multiple cancer types. |
Differentially expressed exon skipping events between male tumor and female tumor patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
Differentially expressed exon skipping events between male tumor and male normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
Differentially expressed exon skipping events between female tumor and female normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
Top |
RNA A-to-I editing events in TCGA for PGAP3 |
| ∗Please access CAeditome for RNA editing annotation. |
Differentially expressed RNA editing events between male tumor and female tumor patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
Differentially expressed RNA editing events between male tumor and male normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
Differentially expressed RNA editing events between female tumor and female normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
Protein coding RNA editing(s). |
| Editing Position | Variant Type | Gene Symbol | Transcript ID | NTchange | AAchange |
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Sex-biased TF-Gene network for PGAP3 |
TFs related to PGAP3.∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
| Cancer Type | TF | Target Gene | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
PGAP3 related gene.∗Only the gene encode TF might with this result. ∗For more information please check Sex-biased TF-Coding gene network. |
Top |
Sex-biased RBP-ES network for PGAP3 |
RBPs related to ES in PGAP3.∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
| Cancer Type | RBP | Target ES | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| LIHC | SAMD4A | exon_skip_288921 | 8.60e+00 | 9.92e-01 | 7.92e+00 | 1.30e-03 | Male-biased |
| LUSC | SAMD4A | exon_skip_288921 | 8.57e+00 | 9.92e-01 | 8.00e+00 | 1.84e-03 | Male-biased |
| ESCA | SAMD4A | exon_skip_288921 | 8.13e+00 | 3.73e-03 | 8.70e+00 | 9.91e-01 | Female-biased |
| PCPG | SAMD4A | exon_skip_288921 | 8.02e+00 | 5.48e-03 | 8.39e+00 | 9.88e-01 | Female-biased |
| MESO | SAMD4A | exon_skip_288921 | 8.57e+00 | 9.86e-01 | 8.19e+00 | 7.33e-03 | Male-biased |
| PAAD | SAMD4A | exon_skip_288921 | 8.51e+00 | 9.89e-01 | 8.16e+00 | 4.90e-03 | Male-biased |
| KIRC | SAMD4A | exon_skip_288921 | 8.69e+00 | 9.91e-01 | 8.29e+00 | 3.11e-03 | Male-biased |
PGAP3 related ES.∗Only the gene encode RBP might with this result. ∗For more information please check Sex-biased RBP-ES network in cancer. |
Top |
Sex-biased CeRNA regulation of gene |
Sex-biased CeRNA regulation of gene. |
| Gene ID | ceRNA(lncRNA-miRNA-mRNA) | Group | Cancer Type |
Top |
Sex-biased eQTL regulation of gene |
Sex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| eQTL | Description |
Male-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs390146 | chr17:41173065:A:T | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs375880 | chr17:41173079:T:C | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs390194 | chr17:41173106:G:T | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs396310 | chr17:41173115:G:T | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs426643 | chr17:41173314:C:T | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs394368 | chr17:41173746:G:A | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs364330 | chr17:41173977:T:G | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs393434 | chr17:41174061:G:A | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs387333 | chr17:41174230:T:C | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs384921 | chr17:41174344:G:A | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs384862 | chr17:41174395:G:T | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs383813 | chr17:41174658:G:A | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs383877 | chr17:41174863:A:G | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs428909 | chr17:41174957:C:T | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs414730 | chr17:41175284:T:C | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs373520 | chr17:41175410:G:A | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs372189 | chr17:41175719:G:A | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs141009 | chr17:41176178:G:T | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs429057 | chr17:41176468:T:C | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs377518 | chr17:41177704:T:C | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs389784 | chr17:41177881:T:C | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs493514 | chr17:41178204:G:A | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs407188 | chr17:41178455:A:G | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs379685 | chr17:41178573:T:A | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs379008 | chr17:41178737:T:C | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs369496 | chr17:41179136:T:C | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs369075 | chr17:41179303:T:A | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs2191376 | chr17:41179595:G:A | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs7208021 | chr17:41179812:A:G | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs7225833 | chr17:41179915:G:T | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs7212376 | chr17:41180090:A:G | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs407944 | chr17:41180792:C:T | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs454518 | chr17:41180869:T:G | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs490945 | chr17:41181008:G:C | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs5005053 | chr17:41181146:T:C | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs534644 | chr17:41181192:T:C | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs578292 | chr17:41181210:G:A | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs557400 | chr17:41181375:T:G | - | -0.191625209770895 | 0.00188841339631548 | READ | Female-baised eQTL |
| rs406860 | chr17:41178383:G:A | - | -0.19132686603226 | 0.00207148442808368 | READ | Female-baised eQTL |
| rs563846 | chr17:41182052:A:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs7502936 | chr17:41182098:T:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs8070863 | chr17:41182128:A:G | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs8070353 | chr17:41182207:C:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs447375 | chr17:41182718:G:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs405495 | chr17:41182837:T:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs448700 | chr17:41183134:T:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs432072 | chr17:41183212:G:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs424830 | chr17:41183513:A:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs407264 | chr17:41183739:C:T | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs404052 | chr17:41184010:T:G | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs453545 | chr17:41184178:A:G | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs452216 | chr17:41184345:G:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs398825 | chr17:41184455:C:T | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs483929 | chr17:41184560:T:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs483893 | chr17:41184574:T:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs2320231 | chr17:41184658:T:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs452531 | chr17:41184906:G:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs449817 | chr17:41185014:A:G | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs385122 | chr17:41185042:T:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs388650 | chr17:41185394:C:T | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs451222 | chr17:41185396:A:G | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238826 | chr17:41186004:T:G | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238824 | chr17:41190266:T:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs183561 | chr17:41194445:T:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238834 | chr17:41195350:G:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs7219042 | chr17:41198488:T:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238822 | chr17:41198982:T:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238821 | chr17:41199615:T:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs173234 | chr17:41200019:G:T | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238808 | chr17:41206736:C:T | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs183560 | chr17:41206914:A:G | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs414902 | chr17:41209290:T:G | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238806 | chr17:41209532:G:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs2320204 | chr17:41210106:C:T | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs2320205 | chr17:41210108:G:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs2320206 | chr17:41210109:C:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238805 | chr17:41210591:C:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs385380 | chr17:41211420:C:T | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs189441 | chr17:41211491:A:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238804 | chr17:41211607:C:G | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238802 | chr17:41212725:C:T | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238799 | chr17:41216887:G:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238798 | chr17:41216907:C:T | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238797 | chr17:41217538:C:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238792 | chr17:41222600:G:A | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs238789 | chr17:41225330:A:G | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs371374 | chr17:41225576:A:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs1860551 | chr17:41232600:T:C | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs8068811 | chr17:41234978:A:T | - | -0.174780398750994 | 0.00681241800959859 | READ | Female-baised eQTL |
| rs11658263 | chr17:41162522:A:G | - | -0.162755350258579 | 0.00867191606721274 | READ | Female-baised eQTL |
| rs34319633 | chr17:35229491:G:T | - | 0.161527893424884 | 0.00993158885495596 | READ | Female-baised eQTL |
| rs238794 | chr17:41219741:T:A | - | -0.161855612189447 | 0.0151859886537647 | READ | Female-baised eQTL |
| rs238790 | chr17:41225235:T:C | - | -0.161697466019528 | 0.0155081277958189 | READ | Female-baised eQTL |
| rs1693484 | chr17:41181594:T:C | - | -0.161047835608342 | 0.0167321482058916 | READ | Female-baised eQTL |
| rs1871894 | chr17:35225366:G:A | - | 0.150283911513757 | 0.0211540826881534 | READ | Female-baised eQTL |
| rs12952351 | chr17:35228375:T:C | - | 0.150283911513757 | 0.0211540826881534 | READ | Female-baised eQTL |
| rs73985233 | chr17:39948898:T:G | - | 0.145801730059944 | 0.0356837154633307 | READ | Female-baised eQTL |
| rs16965455 | chr17:39949501:T:C | - | 0.145801730059944 | 0.0356837154633307 | READ | Female-baised eQTL |
| rs73985234 | chr17:39950291:A:C | - | 0.145801730059944 | 0.0356837154633307 | READ | Female-baised eQTL |
| rs73985231 | chr17:39934635:T:C | - | 0.145833974154516 | 0.0359091677361952 | READ | Female-baised eQTL |
| rs141865395 | chr17:42505522:G:T | - | 0.119411050663634 | 0.00328991223617377 | HNSC | Female-baised eQTL |
| rs62065885 | chr17:40759338:G:A | - | 0.14897547693001 | 0.00362765801889132 | HNSC | Female-baised eQTL |
| rs62065887 | chr17:40766951:G:A | - | 0.14897547693001 | 0.00362765801889132 | HNSC | Female-baised eQTL |
| rs72628303 | chr17:42481967:G:A | - | 0.112093950451429 | 0.00848921137838033 | HNSC | Female-baised eQTL |
| rs138080561 | chr17:42488985:A:G | - | 0.112093950451429 | 0.00848921137838033 | HNSC | Female-baised eQTL |
| rs67275416 | chr17:42492046:C:T | - | 0.112093950451429 | 0.00848921137838033 | HNSC | Female-baised eQTL |
| rs146392775 | chr17:42492551:A:C | - | 0.112093950451429 | 0.00848921137838033 | HNSC | Female-baised eQTL |
| rs138184691 | chr17:42496773:T:C | - | 0.112093950451429 | 0.00848921137838033 | HNSC | Female-baised eQTL |
| rs60952710 | chr17:42515554:G:A | - | 0.112093950451429 | 0.00848921137838033 | HNSC | Female-baised eQTL |
| rs8067384 | chr17:42520721:G:A | - | 0.112093950451429 | 0.00848921137838033 | HNSC | Female-baised eQTL |
| rs938671 | chr17:42521703:T:C | - | 0.112093950451429 | 0.00848921137838033 | HNSC | Female-baised eQTL |
| rs58810548 | chr17:42523873:G:A | - | 0.112093950451429 | 0.00848921137838033 | HNSC | Female-baised eQTL |
| rs743591 | chr17:42527421:T:C | - | 0.112093950451429 | 0.00848921137838033 | HNSC | Female-baised eQTL |
| rs2097219 | chr17:42527989:A:G | - | 0.112093950451429 | 0.00848921137838033 | HNSC | Female-baised eQTL |
| rs68000514 | chr17:42529487:C:T | - | 0.112093950451429 | 0.00848921137838033 | HNSC | Female-baised eQTL |
| rs147198705 | chr17:42529563:T:A | - | 0.112093950451429 | 0.00848921137838033 | HNSC | Female-baised eQTL |
| rs66954133 | chr17:42531988:G:A | - | 0.112093950451429 | 0.00848921137838033 | HNSC | Female-baised eQTL |
| rs115341059 | chr17:42454500:C:T | - | 0.111970726297546 | 0.0085480782087505 | HNSC | Female-baised eQTL |
| rs67560218 | chr17:42455111:T:C | - | 0.111970726297546 | 0.0085480782087505 | HNSC | Female-baised eQTL |
| rs116971005 | chr17:42455378:T:C | - | 0.111970726297546 | 0.0085480782087505 | HNSC | Female-baised eQTL |
| rs3760387 | chr17:42456518:G:T | - | 0.111970726297546 | 0.0085480782087505 | HNSC | Female-baised eQTL |
| rs16967794 | chr17:42457763:A:G | - | 0.111970726297546 | 0.0085480782087505 | HNSC | Female-baised eQTL |
| rs72626002 | chr17:42458109:T:C | - | 0.111970726297546 | 0.0085480782087505 | HNSC | Female-baised eQTL |
| rs144967292 | chr17:42458332:G:A | - | 0.111970726297546 | 0.0085480782087505 | HNSC | Female-baised eQTL |
| rs145289234 | chr17:42470973:A:G | - | 0.111970726297546 | 0.0085480782087505 | HNSC | Female-baised eQTL |
| rs72626001 | chr17:42445210:A:G | - | 0.111740202834414 | 0.00902451360277972 | HNSC | Female-baised eQTL |
| rs191327332 | chr17:42448948:C:T | - | 0.111740202834414 | 0.00902451360277972 | HNSC | Female-baised eQTL |
| rs141580568 | chr17:42449628:T:C | - | 0.111740202834414 | 0.00902451360277972 | HNSC | Female-baised eQTL |
| rs117512511 | chr17:42452949:T:G | - | 0.111740202834414 | 0.00902451360277972 | HNSC | Female-baised eQTL |
| rs72823083 | chr17:42453036:G:C | - | 0.111740202834414 | 0.00902451360277972 | HNSC | Female-baised eQTL |
| rs66774412 | chr17:42453448:T:C | - | 0.111740202834414 | 0.00902451360277972 | HNSC | Female-baised eQTL |
| rs66941552 | chr17:42502496:G:A | - | 0.103023203687855 | 0.0175630661905491 | HNSC | Female-baised eQTL |
| rs1032071 | chr17:42423355:C:T | - | 0.105571193027956 | 0.0192082189855738 | HNSC | Female-baised eQTL |
| rs1032072 | chr17:42423670:C:T | - | 0.105571193027956 | 0.0192082189855738 | HNSC | Female-baised eQTL |
| rs58747199 | chr17:42426502:C:A | - | 0.105571193027956 | 0.0192082189855738 | HNSC | Female-baised eQTL |
| rs72823071 | chr17:42427286:T:C | - | 0.105571193027956 | 0.0192082189855738 | HNSC | Female-baised eQTL |
| rs12603814 | chr17:42432690:G:T | - | 0.105571193027956 | 0.0192082189855738 | HNSC | Female-baised eQTL |
| rs8071329 | chr17:42434622:C:T | - | 0.105571193027956 | 0.0192082189855738 | HNSC | Female-baised eQTL |
| rs2883457 | chr17:42438454:C:T | - | 0.105571193027956 | 0.0192082189855738 | HNSC | Female-baised eQTL |
| rs72829877 | chr17:48593084:G:A | - | 0.163261216146472 | 0.0207094449850594 | HNSC | Female-baised eQTL |
| rs72829881 | chr17:48596177:C:T | - | 0.163261216146472 | 0.0207094449850594 | HNSC | Female-baised eQTL |
| rs72628307 | chr17:42647542:T:C | - | 0.108510397332356 | 0.0211705962652772 | HNSC | Female-baised eQTL |
| rs28392888 | chr17:42590211:A:T | - | 0.106230801925151 | 0.0221883799954953 | HNSC | Female-baised eQTL |
| rs2315275 | chr17:40723592:C:T | - | 0.125816469342531 | 0.0255645151770078 | HNSC | Female-baised eQTL |
| rs8077449 | chr17:40728185:T:C | - | 0.125816469342531 | 0.0255645151770078 | HNSC | Female-baised eQTL |
| rs7221337 | chr17:40728494:T:C | - | 0.125816469342531 | 0.0255645151770078 | HNSC | Female-baised eQTL |
| rs7216706 | chr17:40728531:C:G | - | 0.125816469342531 | 0.0255645151770078 | HNSC | Female-baised eQTL |
| rs7217457 | chr17:40728662:A:G | - | 0.125816469342531 | 0.0255645151770078 | HNSC | Female-baised eQTL |
| rs7216184 | chr17:40728958:G:C | - | 0.125816469342531 | 0.0255645151770078 | HNSC | Female-baised eQTL |
| rs7226123 | chr17:40729114:T:C | - | 0.125816469342531 | 0.0255645151770078 | HNSC | Female-baised eQTL |
| rs62065879 | chr17:40731348:A:G | - | 0.125816469342531 | 0.0255645151770078 | HNSC | Female-baised eQTL |
| rs16966175 | chr17:40731869:C:T | - | 0.125816469342531 | 0.0255645151770078 | HNSC | Female-baised eQTL |
| rs7207616 | chr17:40732095:G:A | - | 0.125816469342531 | 0.0255645151770078 | HNSC | Female-baised eQTL |
| rs6503552 | chr17:40734370:T:A | - | 0.125816469342531 | 0.0255645151770078 | HNSC | Female-baised eQTL |
| rs57605576 | chr17:40735649:G:A | - | 0.125816469342531 | 0.0255645151770078 | HNSC | Female-baised eQTL |
| rs151285077 | chr17:42418403:G:A | - | 0.100330029233107 | 0.0321371725244925 | HNSC | Female-baised eQTL |
| rs2062213 | chr17:42414732:C:G | - | 0.0997721038922574 | 0.0348511808793428 | HNSC | Female-baised eQTL |
| rs7223056 | chr17:40722808:C:T | - | 0.117965823453419 | 0.0417062313569813 | HNSC | Female-baised eQTL |
| rs9916188 | chr17:40723071:A:T | - | 0.117965823453419 | 0.0417062313569813 | HNSC | Female-baised eQTL |
| rs35386915 | chr17:40723122:A:C | - | 0.117965823453419 | 0.0417062313569813 | HNSC | Female-baised eQTL |
| rs9899834 | chr17:40724279:G:T | - | 0.117965823453419 | 0.0417062313569813 | HNSC | Female-baised eQTL |
| rs62065865 | chr17:40726850:C:T | - | 0.117965823453419 | 0.0417062313569813 | HNSC | Female-baised eQTL |
| rs4796670 | chr17:42482154:G:A | - | -0.093810999100886 | 0.0443871088740503 | HNSC | Female-baised eQTL |
| rs7406488 | chr17:42483494:G:A | - | -0.093810999100886 | 0.0443871088740503 | HNSC | Female-baised eQTL |
| rs9913501 | chr17:42498404:C:T | - | -0.093810999100886 | 0.0443871088740503 | HNSC | Female-baised eQTL |
| rs7220372 | chr17:42504025:T:G | - | 0.093810999100886 | 0.0443871088740503 | HNSC | Female-baised eQTL |
| rs938672 | chr17:42507198:A:G | - | 0.093810999100886 | 0.0443871088740503 | HNSC | Female-baised eQTL |
| rs8069457 | chr17:42526705:T:C | - | 0.093810999100886 | 0.0443871088740503 | HNSC | Female-baised eQTL |
| rs2676533 | chr17:42538243:A:G | - | 0.093810999100886 | 0.0443871088740503 | HNSC | Female-baised eQTL |
| rs7224647 | chr17:42458547:T:C | - | -0.0936714525984697 | 0.0447404921167228 | HNSC | Female-baised eQTL |
| rs6416924 | chr17:42465026:T:G | - | -0.0936714525984697 | 0.0447404921167228 | HNSC | Female-baised eQTL |
| rs75474224 | chr17:49118607:A:G | - | 0.168331401386507 | 1.74755791040441e-06 | LUSC | Female-baised eQTL |
| rs75189357 | chr17:49119659:G:C | - | 0.168331401386507 | 1.74755791040441e-06 | LUSC | Female-baised eQTL |
| rs34961075 | chr17:34455083:A:G | - | 0.0886242853803289 | 0.0266753035897423 | LUSC | Female-baised eQTL |
| rs76679230 | chr17:45176184:G:A | - | 0.0785935114142787 | 0.0347211577152729 | LUSC | Female-baised eQTL |
| rs11867300 | chr17:45176785:G:A | - | 0.0785935114142787 | 0.0347211577152729 | LUSC | Female-baised eQTL |
| rs16946637 | chr17:49119731:A:T | - | 0.0852188182057536 | 0.0355814906202125 | LUSC | Female-baised eQTL |
| rs295071 | chr17:34452554:C:T | - | -0.0850913366182877 | 0.0370269182625224 | LUSC | Female-baised eQTL |
| rs210833 | chr17:34450895:C:T | - | -0.0851143463581016 | 0.037134804185056 | LUSC | Female-baised eQTL |
| rs210834 | chr17:34451207:G:A | - | -0.0851143463581016 | 0.037134804185056 | LUSC | Female-baised eQTL |
| rs76235033 | chr17:34445959:C:T | - | 0.0833961448493138 | 0.0397955997292939 | LUSC | Female-baised eQTL |
| rs7503018 | chr17:39774967:A:G | - | 0.104758847559667 | 0.0249606977089719 | STAD | Female-baised eQTL |
| rs16941353 | chr17:46955705:C:A | - | 0.126498039377916 | 0.000529555277660603 | BLCA | Female-baised eQTL |
| rs1497197 | chr17:36819274:A:G | - | 0.182183752008192 | 0.00150629733624344 | BLCA | Female-baised eQTL |
| rs9913231 | chr17:36816921:G:A | - | 0.173583948173937 | 0.00200661315361614 | BLCA | Female-baised eQTL |
| rs28689858 | chr17:46054002:T:C | - | -0.158281124117794 | 0.00280859834568733 | BLCA | Female-baised eQTL |
| rs3107303 | chr17:48711818:C:A | - | 0.114361664788581 | 0.00581237107488926 | BLCA | Female-baised eQTL |
| rs75669839 | chr17:48715008:C:T | - | 0.114361664788581 | 0.00581237107488926 | BLCA | Female-baised eQTL |
| rs117240710 | chr17:41446361:G:T | - | 0.143636645640691 | 0.00921721262107506 | BLCA | Female-baised eQTL |
| rs4057208 | chr17:41453539:C:T | - | 0.143636645640691 | 0.00921721262107506 | BLCA | Female-baised eQTL |
| rs12948887 | chr17:38385810:C:T | - | 0.106660255306981 | 0.0325896165274588 | BLCA | Female-baised eQTL |
| rs6503542 | chr17:38356009:T:C | - | -0.106385187990332 | 0.0334165039929429 | BLCA | Female-baised eQTL |
| rs8070114 | chr17:36817647:A:G | - | 0.127714185275771 | 0.0395953074487893 | BLCA | Female-baised eQTL |
| rs7212656 | chr17:37809089:C:T | - | 0.144484879456721 | 0.0443219904194018 | BLCA | Female-baised eQTL |
| rs7215650 | chr17:37813390:A:G | - | 0.144484879456721 | 0.0443219904194018 | BLCA | Female-baised eQTL |
| rs77841643 | chr17:37815751:C:A | - | 0.144197455263612 | 0.045136083788101 | BLCA | Female-baised eQTL |
| rs57933226 | chr17:39256576:C:T | - | -0.0683425679306699 | 0.0069003211754683 | LUAD | Female-baised eQTL |
| rs9893735 | chr17:39313605:A:C | - | 0.0684143431068972 | 0.00979882026055401 | LUAD | Female-baised eQTL |
| rs4516267 | chr17:39315229:G:T | - | 0.0684143431068972 | 0.00979882026055401 | LUAD | Female-baised eQTL |
| rs8073511 | chr17:39386255:G:C | - | 0.0618138349397775 | 0.0102403784298442 | LUAD | Female-baised eQTL |
| rs676882 | chr17:39277171:T:A | - | -0.0681120167852256 | 0.0120548580341466 | LUAD | Female-baised eQTL |
| rs587880 | chr17:39277646:G:A | - | -0.0681120167852256 | 0.0120548580341466 | LUAD | Female-baised eQTL |
| rs801430 | chr17:39278956:G:C | - | -0.0681120167852256 | 0.0120548580341466 | LUAD | Female-baised eQTL |
| rs590051 | chr17:39290318:T:C | - | 0.0681120167852255 | 0.0120548580341466 | LUAD | Female-baised eQTL |
| rs667193 | chr17:39292582:T:C | - | 0.0681120167852255 | 0.0120548580341466 | LUAD | Female-baised eQTL |
| rs594794 | chr17:39297232:T:C | - | 0.0681120167852255 | 0.0120548580341466 | LUAD | Female-baised eQTL |
| rs582176 | chr17:39297746:T:C | - | 0.0681120167852255 | 0.0120548580341466 | LUAD | Female-baised eQTL |
| rs582088 | chr17:39297796:T:C | - | 0.0681120167852255 | 0.0120548580341466 | LUAD | Female-baised eQTL |
| rs11078899 | chr17:39441586:G:A | - | -0.0681971046030106 | 0.0122796369390407 | LUAD | Female-baised eQTL |
| rs61368704 | chr17:39262823:T:C | - | -0.0678627610126131 | 0.0123699050425963 | LUAD | Female-baised eQTL |
| rs6503500 | chr17:39329672:A:G | - | 0.068029353211826 | 0.012393715129967 | LUAD | Female-baised eQTL |
| rs9891892 | chr17:39323603:A:C | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs7503081 | chr17:39326420:A:G | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs9944459 | chr17:39327932:T:C | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs146781981 | chr17:39337345:C:A | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs28482878 | chr17:39340847:A:G | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs9909304 | chr17:39344255:G:T | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs9912310 | chr17:39346757:T:C | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs8071300 | chr17:39352271:G:C | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs4287601 | chr17:39357599:T:C | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs2338799 | chr17:39357688:G:A | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs6503504 | chr17:39358159:A:G | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs11871813 | chr17:39362049:A:C | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs9908131 | chr17:39364196:T:C | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs7212621 | chr17:39371658:T:G | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs4794808 | chr17:39375663:C:T | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs28799952 | chr17:39376803:C:T | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs9899069 | chr17:39384519:A:G | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs7208487 | chr17:39387196:T:G | - | 0.0678472344523172 | 0.0125498294417478 | LUAD | Female-baised eQTL |
| rs3744349 | chr17:39258589:C:T | - | -0.0678351378294445 | 0.0127248065811335 | LUAD | Female-baised eQTL |
| rs2879259 | chr17:39254639:C:G | - | -0.0676018375414277 | 0.013155471735743 | LUAD | Female-baised eQTL |
| rs4795358 | chr17:39416812:A:C | - | -0.0677012371658935 | 0.0132054436616732 | LUAD | Female-baised eQTL |
| rs7208252 | chr17:39428115:A:G | - | -0.0677012371658935 | 0.0132054436616732 | LUAD | Female-baised eQTL |
| rs9646419 | chr17:39440932:A:G | - | -0.0677012371658935 | 0.0132054436616732 | LUAD | Female-baised eQTL |
| rs11078894 | chr17:39240552:C:G | - | -0.068948985508093 | 0.0133462653887719 | LUAD | Female-baised eQTL |
| rs12938099 | chr17:39456657:T:G | - | -0.0669214461712293 | 0.0133547884941166 | LUAD | Female-baised eQTL |
| rs8074855 | chr17:39459272:T:C | - | -0.0669214461712293 | 0.0133547884941166 | LUAD | Female-baised eQTL |
| rs12941418 | chr17:39472406:A:G | - | -0.0667277082285938 | 0.0135549518728477 | LUAD | Female-baised eQTL |
| rs4795375 | chr17:39506679:T:C | - | -0.0667277082285938 | 0.0135549518728477 | LUAD | Female-baised eQTL |
| rs12937013 | chr17:39509318:G:A | - | -0.0667277082285938 | 0.0135549518728477 | LUAD | Female-baised eQTL |
| rs4795367 | chr17:39452590:G:C | - | -0.0666600199631358 | 0.0138724440045272 | LUAD | Female-baised eQTL |
| rs8074276 | chr17:39491513:G:A | - | -0.0666600199631358 | 0.0138724440045272 | LUAD | Female-baised eQTL |
| rs801427 | chr17:39280458:A:G | - | -0.0664028078262201 | 0.014269784402565 | LUAD | Female-baised eQTL |
| rs12150047 | chr17:39445502:A:G | - | -0.0673324597408302 | 0.0143219784917411 | LUAD | Female-baised eQTL |
| rs2302073 | chr17:39301089:A:G | - | 0.0672571162486006 | 0.0145164354123173 | LUAD | Female-baised eQTL |
| rs801418 | chr17:39301729:G:C | - | 0.0672571162486006 | 0.0145164354123173 | LUAD | Female-baised eQTL |
| rs584377 | chr17:39303875:G:A | - | 0.0672571162486006 | 0.0145164354123173 | LUAD | Female-baised eQTL |
| rs8073907 | chr17:39267896:C:T | - | -0.0677933063220647 | 0.014945974402012 | LUAD | Female-baised eQTL |
| rs665413 | chr17:39299425:T:A | - | 0.0677933063220647 | 0.014945974402012 | LUAD | Female-baised eQTL |
| rs667239 | chr17:39285988:A:G | - | 0.0636407432143494 | 0.0157443663443588 | LUAD | Female-baised eQTL |
| rs11655972 | chr17:39250819:C:T | - | -0.0672680045012116 | 0.0162789024057433 | LUAD | Female-baised eQTL |
| rs12449852 | chr17:39475835:A:G | - | -0.0656821867195357 | 0.0165565690674457 | LUAD | Female-baised eQTL |
| rs12950186 | chr17:39237142:A:C | - | -0.0679096017870086 | 0.0169575915280019 | LUAD | Female-baised eQTL |
| rs651827 | chr17:39287119:G:A | - | 0.0660367339973238 | 0.017682757290582 | LUAD | Female-baised eQTL |
| rs9906612 | chr17:39391378:A:C | - | 0.0666531476765039 | 0.0184429564521983 | LUAD | Female-baised eQTL |
| rs11078895 | chr17:39244798:A:G | - | -0.0637204766303414 | 0.0200855136421701 | LUAD | Female-baised eQTL |
| rs9972882 | chr17:39651445:A:C | - | -0.059606993335671 | 0.020821751908435 | LUAD | Female-baised eQTL |
| rs9901219 | chr17:39402116:T:G | - | 0.0573351585491577 | 0.0232690599982441 | LUAD | Female-baised eQTL |
| rs6503513 | chr17:39405360:A:G | - | 0.0573351585491577 | 0.0232690599982441 | LUAD | Female-baised eQTL |
| rs11078912 | chr17:39515237:A:G | - | -0.0529712702303052 | 0.0271558861615386 | LUAD | Female-baised eQTL |
| rs2879258 | chr17:39243126:G:T | - | -0.0704962931300659 | 0.0284168520107324 | LUAD | Female-baised eQTL |
| rs9912212 | chr17:39338292:T:G | - | 0.0647488663103218 | 0.029141470662121 | LUAD | Female-baised eQTL |
| rs2303316 | chr17:39547964:A:G | - | -0.0514911339790265 | 0.0351756183188966 | LUAD | Female-baised eQTL |
| rs9892675 | chr17:39392947:C:T | - | 0.0572216373162754 | 0.035996367552478 | LUAD | Female-baised eQTL |
| rs2271308 | chr17:39661229:T:C | - | -0.0525486212755034 | 0.0365570821735169 | LUAD | Female-baised eQTL |
| rs801417 | chr17:39302619:C:T | - | 0.0678169916056354 | 0.0392136114992373 | LUAD | Female-baised eQTL |
| rs644173 | chr17:39274266:T:C | - | -0.0511227341167692 | 0.0411164666158648 | LUAD | Female-baised eQTL |
| rs602688 | chr17:39283243:T:C | - | 0.0502737038062252 | 0.041654887905275 | LUAD | Female-baised eQTL |
| rs4488484 | chr17:39561124:T:A | - | -0.0616166504057225 | 0.0418410955275621 | LUAD | Female-baised eQTL |
| rs602282 | chr17:39276768:C:T | - | -0.0508025474272701 | 0.042446953676495 | LUAD | Female-baised eQTL |
| rs11078896 | chr17:39259291:C:T | - | -0.0506878772185353 | 0.0429772762710606 | LUAD | Female-baised eQTL |
| rs2061342 | chr17:39249404:T:G | - | -0.0506301832549485 | 0.044032652783257 | LUAD | Female-baised eQTL |
| rs8081338 | chr17:39249886:C:T | - | -0.0506301832549485 | 0.044032652783257 | LUAD | Female-baised eQTL |
| rs801429 | chr17:39279125:T:C | - | -0.0657751793844862 | 0.0445696246903579 | LUAD | Female-baised eQTL |
| rs1971663 | chr17:39348188:C:T | - | 0.0652323620471672 | 0.0454379492939306 | LUAD | Female-baised eQTL |
| rs7220650 | chr17:39330915:T:C | - | 0.0515014674667079 | 0.0459596889202176 | LUAD | Female-baised eQTL |
| rs2061338 | chr17:39265514:T:C | - | -0.0505258900468005 | 0.0462171760999886 | LUAD | Female-baised eQTL |
| rs1966916 | chr17:39268985:T:G | - | -0.0505258900468005 | 0.0462171760999886 | LUAD | Female-baised eQTL |
| rs1966915 | chr17:39269009:A:C | - | -0.0505258900468005 | 0.0462171760999886 | LUAD | Female-baised eQTL |
| rs8079662 | chr17:39269334:C:G | - | -0.0505258900468005 | 0.0462171760999886 | LUAD | Female-baised eQTL |
| rs8079590 | chr17:39269948:T:C | - | -0.0505258900468005 | 0.0462171760999886 | LUAD | Female-baised eQTL |
| rs7210488 | chr17:39383566:T:G | - | 0.0517605692659311 | 0.0463937956058671 | LUAD | Female-baised eQTL |
| rs752314 | chr17:39254447:C:T | - | -0.0504712428815402 | 0.0465057599486513 | LUAD | Female-baised eQTL |
| rs4325601 | chr17:39255176:G:A | - | -0.0504712428815402 | 0.0465057599486513 | LUAD | Female-baised eQTL |
| rs11078897 | chr17:39259617:C:T | - | -0.0504712428815402 | 0.0465057599486513 | LUAD | Female-baised eQTL |
| rs62074994 | chr17:39261958:G:A | - | -0.0504712428815402 | 0.0465057599486513 | LUAD | Female-baised eQTL |
| rs2338756 | chr17:39262967:G:A | - | -0.0504712428815402 | 0.0465057599486513 | LUAD | Female-baised eQTL |
| rs8076462 | chr17:39243772:G:C | - | -0.0506485497838435 | 0.0476774298622856 | LUAD | Female-baised eQTL |
| rs33933929 | chr17:39270188:A:C | - | -0.0501055366832489 | 0.0477316043220561 | LUAD | Female-baised eQTL |
| rs4795355 | chr17:39271129:C:T | - | -0.0501055366832489 | 0.0477316043220561 | LUAD | Female-baised eQTL |
| rs11656287 | chr17:39276430:G:A | - | -0.0501055366832489 | 0.0477316043220561 | LUAD | Female-baised eQTL |
| rs600010 | chr17:39277264:T:C | - | -0.0501055366832489 | 0.0477316043220561 | LUAD | Female-baised eQTL |
| rs3744348 | chr17:39261322:C:G | - | -0.0500537290983439 | 0.0479994770802897 | LUAD | Female-baised eQTL |
| rs8067302 | chr17:39324537:G:A | - | 0.0503343389496891 | 0.048983128593468 | LUAD | Female-baised eQTL |
| rs2338801 | chr17:39334527:G:T | - | 0.0503343389496891 | 0.048983128593468 | LUAD | Female-baised eQTL |
| rs113414512 | chr17:39379045:C:T | - | 0.0503343389496891 | 0.048983128593468 | LUAD | Female-baised eQTL |
| rs588193 | chr17:39284186:A:C | - | 0.0500093277274658 | 0.0489975189660141 | LUAD | Female-baised eQTL |
| rs60083830 | chr17:39280422:A:G | - | -0.049849632587175 | 0.0494083492237527 | LUAD | Female-baised eQTL |
| rs35112839 | chr17:39457631:A:G | - | -0.0510647543953355 | 0.0498518973552704 | LUAD | Female-baised eQTL |
| rs7223896 | chr17:39468931:T:C | - | -0.0510253789256192 | 0.0499703719322533 | LUAD | Female-baised eQTL |
| rs2018026 | chr17:39503353:G:A | - | -0.0510253789256192 | 0.0499703719322533 | LUAD | Female-baised eQTL |
| rs7224067 | chr17:39505265:A:G | - | -0.0510253789256192 | 0.0499703719322533 | LUAD | Female-baised eQTL |
| rs116920984 | chr17:42339117:G:A | - | 0.083897752343359 | 6.98028035645143e-05 | COAD | Female-baised eQTL |
| rs12948504 | chr17:34654705:A:G | - | 0.0617576898635114 | 0.00158378868586184 | COAD | Female-baised eQTL |
| rs9915172 | chr17:40768780:C:T | - | 0.0606531279329726 | 0.00601336303920176 | COAD | Female-baised eQTL |
| rs11651716 | chr17:34475400:C:A | - | 0.0537405891047005 | 0.0108923744363897 | COAD | Female-baised eQTL |
| rs36082230 | chr17:31434012:G:A | - | 0.0514962458968962 | 0.0321356979557006 | COAD | Female-baised eQTL |
| rs12944238 | chr17:31436355:G:A | - | 0.0512878197700861 | 0.0335826684165251 | COAD | Female-baised eQTL |
Female-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs8065269 | chr17:34067017:T:C | - | 0.202221392102158 | 7.28871407191076e-06 | READ | Male-baised eQTL |
| rs117993299 | chr17:47728931:T:A | - | 0.168253873075431 | 0.00156723297276375 | READ | Male-baised eQTL |
| rs11870252 | chr17:47300459:T:C | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs11867253 | chr17:47300675:C:T | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs11867192 | chr17:47301102:G:A | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs3785873 | chr17:47301872:G:A | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs55706706 | chr17:47303204:C:T | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs76134103 | chr17:47303598:T:G | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs16941855 | chr17:47303745:G:A | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs56722403 | chr17:47303795:G:A | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs80030727 | chr17:47304042:A:C | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs11869835 | chr17:47304457:G:T | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs11868344 | chr17:47305811:A:G | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs11870781 | chr17:47305929:C:T | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs16941861 | chr17:47306253:A:G | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs111568422 | chr17:47306799:C:G | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs73322309 | chr17:47307044:C:T | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs116860178 | chr17:47308152:G:A | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs16941863 | chr17:47308354:A:G | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs16941864 | chr17:47310875:C:T | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs2317676 | chr17:47310917:A:G | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs140661797 | chr17:47313083:C:T | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs143090841 | chr17:47313407:C:T | - | 0.16799084465689 | 0.00162278317658338 | READ | Male-baised eQTL |
| rs2873530 | chr17:47320074:C:T | - | 0.167944368978554 | 0.00167312881298383 | READ | Male-baised eQTL |
| rs118008523 | chr17:47323067:C:T | - | 0.167944368978554 | 0.00167312881298383 | READ | Male-baised eQTL |
| rs184938293 | chr17:47300344:C:T | - | 0.167939777772708 | 0.00167435924641406 | READ | Male-baised eQTL |
| rs11652046 | chr17:34784901:T:C | - | 0.166035142847866 | 0.00235931597598393 | READ | Male-baised eQTL |
| rs145682182 | chr17:47887582:A:G | - | 0.164344383139464 | 0.00308757502854512 | READ | Male-baised eQTL |
| rs66459548 | chr17:39736444:T:A | - | 0.16626294225747 | 0.00491437623362512 | READ | Male-baised eQTL |
| rs9896218 | chr17:39738210:A:C | - | 0.16626294225747 | 0.00491437623362512 | READ | Male-baised eQTL |
| rs59667301 | chr17:39739126:T:C | - | 0.16626294225747 | 0.00491437623362512 | READ | Male-baised eQTL |
| rs35585925 | chr17:39741957:T:C | - | 0.16626294225747 | 0.00491437623362512 | READ | Male-baised eQTL |
| rs36079893 | chr17:39742656:A:C | - | 0.16626294225747 | 0.00491437623362512 | READ | Male-baised eQTL |
| rs117900456 | chr17:47375992:T:C | - | 0.155582842726881 | 0.00518054868574949 | READ | Male-baised eQTL |
| rs117092090 | chr17:47379639:G:A | - | 0.155582842726881 | 0.00518054868574949 | READ | Male-baised eQTL |
| rs117292773 | chr17:47386642:A:C | - | 0.155582842726881 | 0.00518054868574949 | READ | Male-baised eQTL |
| rs118004742 | chr17:47391492:T:G | - | 0.155582842726881 | 0.00518054868574949 | READ | Male-baised eQTL |
| rs116980297 | chr17:47402801:T:A | - | 0.155582842726881 | 0.00518054868574949 | READ | Male-baised eQTL |
| rs189227749 | chr17:47425007:C:T | - | 0.155582842726881 | 0.00518054868574949 | READ | Male-baised eQTL |
| rs11080301 | chr17:34785898:T:C | - | 0.154402217126845 | 0.00624320861518989 | READ | Male-baised eQTL |
| rs11652253 | chr17:34787124:C:T | - | 0.154402217126845 | 0.00624320861518989 | READ | Male-baised eQTL |
| rs10853173 | chr17:34787550:T:C | - | 0.154402217126845 | 0.00624320861518989 | READ | Male-baised eQTL |
| rs11080302 | chr17:34788004:A:G | - | 0.154402217126845 | 0.00624320861518989 | READ | Male-baised eQTL |
| rs11080303 | chr17:34789063:C:T | - | 0.154402217126845 | 0.00624320861518989 | READ | Male-baised eQTL |
| rs12051759 | chr17:34789914:C:T | - | 0.154402217126845 | 0.00624320861518989 | READ | Male-baised eQTL |
| rs12604000 | chr17:34792804:G:T | - | 0.154402217126845 | 0.00624320861518989 | READ | Male-baised eQTL |
| rs11080304 | chr17:34793195:C:T | - | 0.154402217126845 | 0.00624320861518989 | READ | Male-baised eQTL |
| rs76004009 | chr17:47711950:G:A | - | 0.146601903699513 | 0.0101858343847919 | READ | Male-baised eQTL |
| rs77611269 | chr17:47713449:C:T | - | 0.146601903699513 | 0.0101858343847919 | READ | Male-baised eQTL |
| rs147939289 | chr17:47330489:C:A | - | 0.145814456304062 | 0.0111232325256295 | READ | Male-baised eQTL |
| rs116968656 | chr17:47343869:A:G | - | 0.145814456304062 | 0.0111232325256295 | READ | Male-baised eQTL |
| rs146329589 | chr17:47348190:G:A | - | 0.145814456304062 | 0.0111232325256295 | READ | Male-baised eQTL |
| rs139648987 | chr17:47348213:C:T | - | 0.145814456304062 | 0.0111232325256295 | READ | Male-baised eQTL |
| rs78845722 | chr17:47350585:T:G | - | 0.145814456304062 | 0.0111232325256295 | READ | Male-baised eQTL |
| rs8072612 | chr17:39770867:A:G | - | 0.118184761699693 | 0.0189170450244188 | PAAD | Male-baised eQTL |
| rs2313429 | chr17:39774406:A:G | - | 0.118184761699693 | 0.0189170450244188 | PAAD | Male-baised eQTL |
| rs7503018 | chr17:39774967:A:G | - | 0.118184761699693 | 0.0189170450244188 | PAAD | Male-baised eQTL |
| rs9901483 | chr17:39776521:T:A | - | 0.118184761699693 | 0.0189170450244188 | PAAD | Male-baised eQTL |
| rs7224641 | chr17:39778658:T:C | - | 0.118184761699693 | 0.0189170450244188 | PAAD | Male-baised eQTL |
| rs13380871 | chr17:39779996:T:C | - | 0.118184761699693 | 0.0189170450244188 | PAAD | Male-baised eQTL |
| rs34016964 | chr17:39782724:G:T | - | 0.118184761699693 | 0.0189170450244188 | PAAD | Male-baised eQTL |
| rs9909365 | chr17:39783706:A:G | - | 0.118184761699693 | 0.0189170450244188 | PAAD | Male-baised eQTL |
| rs113812449 | chr17:39783915:T:C | - | 0.118184761699693 | 0.0189170450244188 | PAAD | Male-baised eQTL |
| rs34599546 | chr17:39786719:C:T | - | 0.118184761699693 | 0.0189170450244188 | PAAD | Male-baised eQTL |
| rs9911634 | chr17:39787478:C:A | - | 0.118184761699693 | 0.0189170450244188 | PAAD | Male-baised eQTL |
| rs9913044 | chr17:39789975:G:A | - | 0.118184761699693 | 0.0189170450244188 | PAAD | Male-baised eQTL |
| rs56928975 | chr17:39795779:A:G | - | 0.118184761699693 | 0.0189170450244188 | PAAD | Male-baised eQTL |
| rs61702583 | chr17:39508464:A:C | - | 0.075799843252974 | 0.0444429934669806 | LIHC | Male-baised eQTL |
| rs118099962 | chr17:47323969:T:C | - | 0.0367424981996243 | 0.0358347028598192 | LUSC | Male-baised eQTL |
| rs79620933 | chr17:45341475:C:T | - | 0.122958657796367 | 8.7374136748644e-05 | STAD | Male-baised eQTL |
| rs142996646 | chr17:49679314:T:C | - | 0.115001904488815 | 0.00295507580438358 | STAD | Male-baised eQTL |
| rs113190710 | chr17:34030552:C:T | - | 0.0808350235622386 | 0.043317912530256 | LGG | Male-baised eQTL |
| rs8075863 | chr17:34062377:C:T | - | -0.0589957220205855 | 0.0479069921513072 | LGG | Male-baised eQTL |
| rs12601749 | chr17:39937062:A:G | - | 0.0540662752229148 | 0.00992682665595611 | KIRC | Male-baised eQTL |
| rs3937429 | chr17:35065668:G:C | - | 0.0727164923527124 | 0.0128239745705143 | KIRC | Male-baised eQTL |
| rs2240074 | chr17:35022251:G:T | - | 0.0706804633340314 | 0.0208537748739457 | KIRC | Male-baised eQTL |
| rs12951350 | chr17:35084975:A:G | - | 0.0721804018806908 | 0.0219516791062479 | KIRC | Male-baised eQTL |
| rs8079416 | chr17:39936460:T:C | - | 0.0489339925096367 | 0.0303875905560498 | KIRC | Male-baised eQTL |
| rs6503525 | chr17:39938921:G:C | - | 0.0482977189625151 | 0.0324810608663041 | KIRC | Male-baised eQTL |
| rs2269857 | chr17:35015003:C:G | - | 0.0660445446872447 | 0.0337834796295204 | KIRC | Male-baised eQTL |
| rs35123741 | chr17:39936677:A:G | - | 0.048323185210674 | 0.0340508531988266 | KIRC | Male-baised eQTL |
| rs12603481 | chr17:39937086:G:A | - | 0.048323185210674 | 0.0340508531988266 | KIRC | Male-baised eQTL |
| rs11080230 | chr17:33599355:T:C | - | 0.11444284084237 | 0.0349611864256582 | KIRC | Male-baised eQTL |
| rs56199421 | chr17:39934555:C:T | - | 0.0481253895554815 | 0.0416002704642444 | KIRC | Male-baised eQTL |
| rs6503574 | chr17:38409163:T:A | - | -0.0635576956191144 | 0.0448078216270166 | KIRC | Male-baised eQTL |
| rs7502205 | chr17:38409206:T:C | - | 0.0635576956191144 | 0.0448078216270166 | KIRC | Male-baised eQTL |
| rs9303681 | chr17:35052648:C:T | - | 0.0644520962635388 | 0.0462269907216111 | KIRC | Male-baised eQTL |
| rs11651522 | chr17:46995490:G:A | - | -0.0594064372775882 | 0.0204376349319308 | BLCA | Male-baised eQTL |
| rs2229302 | chr17:48543040:G:A | - | 0.0392610658783704 | 0.0133884507939974 | LUAD | Male-baised eQTL |
| rs56128659 | chr17:48544466:T:A | - | 0.0392610658783704 | 0.0133884507939974 | LUAD | Male-baised eQTL |
| rs1042822 | chr17:48542733:G:T | - | 0.0387603830793468 | 0.0153311915325221 | LUAD | Male-baised eQTL |
| rs1042818 | chr17:48542749:T:C | - | 0.0387603830793468 | 0.0153311915325221 | LUAD | Male-baised eQTL |
| rs8074125 | chr17:48532698:G:T | - | 0.0368956668363411 | 0.0225131296666309 | LUAD | Male-baised eQTL |
| rs12603998 | chr17:40910399:T:C | - | 0.0519134428320302 | 0.0343622400145045 | LUAD | Male-baised eQTL |
| rs62066689 | chr17:48531730:T:C | - | 0.0346382459114727 | 0.0373237572130275 | LUAD | Male-baised eQTL |
| rs8066613 | chr17:48506158:T:A | - | 0.0341649529299385 | 0.0407797123666442 | LUAD | Male-baised eQTL |
| rs35956334 | chr17:48505080:A:G | - | 0.0340416694489524 | 0.0436815376391756 | LUAD | Male-baised eQTL |
| rs5027 | chr17:44250188:C:T | - | 0.0681978041435361 | 0.0438238587961067 | LUAD | Male-baised eQTL |
| rs4239209 | chr17:48496955:T:A | - | -0.0328238508454336 | 0.0462146791430274 | LUAD | Male-baised eQTL |
| rs4239210 | chr17:48496956:A:G | - | -0.0328238508454336 | 0.0462146791430274 | LUAD | Male-baised eQTL |
| rs9904760 | chr17:48497669:A:G | - | -0.0328238508454336 | 0.0462146791430274 | LUAD | Male-baised eQTL |
| rs117571554 | chr17:33821661:G:T | - | 0.0939324857272614 | 2.70026711596841e-05 | COAD | Male-baised eQTL |
| rs79753203 | chr17:33772557:A:G | - | 0.0866139522805403 | 9.39460904188982e-05 | COAD | Male-baised eQTL |
| rs1873474 | chr17:33785849:G:C | - | 0.0820107880777474 | 0.000241360127558428 | COAD | Male-baised eQTL |
| rs7503515 | chr17:33824595:T:C | - | 0.0781442496263707 | 0.00035523245200093 | COAD | Male-baised eQTL |
| rs75549785 | chr17:33828604:A:T | - | 0.0766701369043314 | 0.000536423801934291 | COAD | Male-baised eQTL |
| rs76639412 | chr17:33809132:A:G | - | 0.0765442694255728 | 0.000550720388673495 | COAD | Male-baised eQTL |
| rs111639504 | chr17:31085003:C:T | - | 0.0774883202581577 | 0.000724785498488643 | COAD | Male-baised eQTL |
| rs55711260 | chr17:31253730:C:T | - | 0.0681960044875431 | 0.00265408634092845 | COAD | Male-baised eQTL |
| rs1015526 | chr17:31256138:A:T | - | 0.0681960044875431 | 0.00265408634092845 | COAD | Male-baised eQTL |
| rs72811699 | chr17:31113341:C:T | - | 0.0681000989012583 | 0.00269130892751947 | COAD | Male-baised eQTL |
| rs72815639 | chr17:31367904:G:A | - | 0.0680718008257953 | 0.00273749484910103 | COAD | Male-baised eQTL |
| rs17880432 | chr17:31248014:C:T | - | 0.0660613289613648 | 0.00359105116764898 | COAD | Male-baised eQTL |
| rs113615164 | chr17:31268537:G:A | - | 0.0660613289613648 | 0.00359105116764898 | COAD | Male-baised eQTL |
| rs72815622 | chr17:31281225:T:C | - | 0.0660613289613648 | 0.00359105116764898 | COAD | Male-baised eQTL |
| rs56104773 | chr17:31185692:T:G | - | 0.0641073767012464 | 0.00466425134879783 | COAD | Male-baised eQTL |
| rs17883497 | chr17:31218423:T:C | - | 0.0641073767012464 | 0.00466425134879783 | COAD | Male-baised eQTL |
| rs73299562 | chr17:40824281:T:C | - | 0.0560509268955072 | 0.00565488930557743 | COAD | Male-baised eQTL |
| rs4488484 | chr17:39561124:T:A | - | -0.0368868003589444 | 0.00975118455367986 | COAD | Male-baised eQTL |
| rs4792888 | chr17:45800588:A:G | - | 0.0445567965713073 | 0.0180367478704767 | COAD | Male-baised eQTL |
| rs72811666 | chr17:30927908:G:A | - | 0.0492555699667766 | 0.0250568509055195 | COAD | Male-baised eQTL |
| rs11867369 | chr17:33892217:T:C | - | 0.0554828192452026 | 0.0255815894358973 | COAD | Male-baised eQTL |
| rs10512454 | chr17:33772726:G:A | - | 0.044743456133136 | 0.029067148062534 | COAD | Male-baised eQTL |
| rs142221225 | chr17:33879089:A:C | - | 0.0529807280179003 | 0.0316429403850881 | COAD | Male-baised eQTL |
| rs7209957 | chr17:33409230:A:T | - | 0.0391670477231039 | 0.0350547871286875 | COAD | Male-baised eQTL |
| rs1873473 | chr17:33781943:G:C | - | 0.043135437578711 | 0.0385063993821094 | COAD | Male-baised eQTL |
Opposite sex-biased eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Sex-biased Gene in Cancer | Cancer Type |
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Sex-biased eQTM regulation of gene |
Sex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table). |
Male-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
| cg19758448 | chr17:39672043 | gene,exon,CDS,UTR | -0.07808679407252 | 8.86545960840652e-06 | -0.34908728139977807 | 8.648724507478451e-08 | LUAD |
| cg03815147 | chr17:39677637 | gene | -0.489892624998389 | 1.18071170136822e-16 | -0.563278105791207 | 8.121444832956859e-20 | STAD |
| cg15227682 | chr17:39687011 | gene | -0.103193983054354 | 1.87172044869662e-09 | -0.4092854527484589 | 1.428049125308216e-12 | LUSC |
| cg15227682 | chr17:39687011 | gene | -0.248445040121069 | 5.73103436869359e-21 | -0.4960858926355061 | 2.9450305884241668e-24 | HNSC |
| cg19758448 | chr17:39672043 | gene,exon,CDS,UTR | -0.168390587090226 | 1.56230710568881e-13 | -0.41266808951260325 | 1.4513528768510078e-16 | HNSC |
Female-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
Opposite sex-biased eQTM regulation. |
| CpG Site | CpG Postion | CpG Island | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Male Cor | Male P-value | Female Cor | Female P-value | Sex-biased Coding Gene | Cancer Type |
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Sex-biased sQTL regulation of gene |
Sex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTL | Description |
Male-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
Female-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
Opposite sex-biased sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Male Effect | Male FDR | Female Effect | Female FDR | Cancer Type |
Top |
Sex-biased sQTM regulation of gene |
Sex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTM | Description |
Male-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
Female-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
Opposite sex-biased sQTM regulation. |
| EX ID | EX Info | Skipped Exon | CPG Site | CPG Position | CPG Island | Position to EX Events | Male Effect | Male FDR | Female Effect | Female FDR | Male Correlation | Male P-value | Female Correlation | Female P-value | ORF_anno | Cancer Type |
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Related disease information of PGAP3 |
Diseases associated with this gene (DisGeNET). |
| Gene ID | Gene Symbol | Disease ID | Disease Name | Number of PMID | Source |
| ENSG00000161395 | PGAP3 | C1855923 | Hyperphosphatasia with Mental Retardation | 1 | CTD_human |