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Gene: ENSG00000151882 |
Summary for CCL28 |
Gene summary |
| Gene information | Ensembl ID | ENSG00000151882 | Gene symbol | CCL28 |
| Gene name | C-C motif chemokine ligand 28 | |
| HGNC | 17700 | |
| Entrez ID | 56477 | |
| Gene type | protein_coding | |
| Synonyms | CCL28|SCYA28|MEC|CCK1 | |
| UniProtAcc | Q9NRJ3 |
Drugs associated with this gene(DrugBank). |
| Gene ID | Gene Symbol | Drug ID | Drug Name | Drug Type |
Cancer therapeutic drugs associated with this gene(NCI). |
| Gene ID | Gene Name | Drug ID | Drug Name | Drug Type | Cancer |
Top |
Structure and expression level for CCL28 |
AS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.∗For more information on exon skipping events please check the ExonskipDB database. ∗For more information on exon skipping events please check the CAeditome database. |
Landscape of gene expressions across multiple cancer types. |
Differentially expressed gene analysis between tumor male and tumor female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| CCL28 | 1.75e+03 | -1.75e+00 | 5.37e-01 | -3.25e+00 | 1.15e-03 | 1.26e-02 | BRCA |
Differentially expressed gene analysis between tumor male and normal male samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| CCL28 | 2.23e+03 | -1.11e+00 | 3.62e-01 | -3.08e+00 | 2.08e-03 | 5.35e-03 | STAD |
| CCL28 | 1.79e+03 | 2.36e+00 | 3.60e-01 | 6.55e+00 | 5.78e-11 | 3.90e-10 | KIRP |
Differentially expressed gene analysis between tumor female and normal female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| CCL28 | 6.84e+02 | 1.08e+00 | 2.45e-01 | 4.43e+00 | 9.42e-06 | 2.46e-05 | LUAD |
| CCL28 | 2.48e+03 | -2.43e+00 | 1.80e-01 | -1.35e+01 | 1.54e-41 | 1.17e-40 | BRCA |
| CCL28 | 1.23e+03 | -2.29e+00 | 5.50e-01 | -4.16e+00 | 3.14e-05 | 1.76e-04 | READ |
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Sex-biased somatic mutation for CCL28 |
| ∗For more information on exon skipping events please check the ExonskipDB database. |
| Gene ID | Cancer Type | Hugo Symbol | Male | Female | pval | or | ci.up | ci.low | adjPval |
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DNA methylation with beta values for CCL28 |
Landscape of DNA methylation across multiple cancer types. |
Differentially expressed CpG sites between male tumor and female tumor patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
Differentially expressed CpG sites between male tumor and male normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| KIRC | cg14076417 | chr5:43412499 | CGI:chr5:43396795-43397262 | promoter | 7.54e-01 | 8.74e-01 | -3.36e+00 | 7.76e-04 | 1.24e-03 | -1.20e-01 |
| LUAD | cg26237003 | chr5:43413107 | CGI:chr5:43396795-43397262 | promoter | 7.28e-01 | 8.54e-01 | -2.01e+00 | 4.43e-02 | 4.53e-02 | -1.27e-01 |
| HNSC | cg14076417 | chr5:43412499 | CGI:chr5:43396795-43397262 | promoter | 5.40e-01 | 7.10e-01 | -3.52e+00 | 4.33e-04 | 8.92e-04 | -1.70e-01 |
| HNSC | cg26237003 | chr5:43413107 | CGI:chr5:43396795-43397262 | promoter | 6.87e-01 | 8.19e-01 | -2.79e+00 | 5.26e-03 | 7.42e-03 | -1.32e-01 |
| BLCA | cg23863670 | chr5:43411827 | CGI:chr5:43396795-43397262 | promoter,gene body | 7.01e-01 | 8.30e-01 | -2.68e+00 | 7.35e-03 | 1.11e-02 | -1.30e-01 |
| KIRP | cg26237003 | chr5:43413107 | CGI:chr5:43396795-43397262 | promoter | 8.95e-01 | 7.88e-01 | 6.05e+00 | 1.49e-09 | 5.40e-08 | 1.07e-01 |
| CHOL | cg03326188 | chr5:43412363 | CGI:chr5:43396795-43397262 | UTR,promoter,exon,gene body | 4.75e-01 | 6.89e-01 | -2.14e+00 | 3.25e-02 | 3.87e-02 | -2.15e-01 |
Differentially expressed CpG sites between female tumor and female normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| BRCA | cg26237003 | chr5:43413107 | CGI:chr5:43396795-43397262 | promoter | 7.18e-01 | 8.27e-01 | -3.55e+00 | 3.86e-04 | 5.36e-04 | -1.09e-01 |
| HNSC | cg03326188 | chr5:43412363 | CGI:chr5:43396795-43397262 | UTR,promoter,exon,gene body | 4.59e-01 | 3.13e-01 | 2.76e+00 | 5.78e-03 | 1.42e-02 | 1.46e-01 |
| COAD | cg03077492 | chr5:43412993 | CGI:chr5:43396795-43397262 | promoter | 6.64e-01 | 5.06e-01 | 2.30e+00 | 2.16e-02 | 2.75e-02 | 1.59e-01 |
| COAD | cg26237003 | chr5:43413107 | CGI:chr5:43396795-43397262 | promoter | 5.25e-01 | 3.74e-01 | 2.33e+00 | 1.98e-02 | 2.59e-02 | 1.50e-01 |
Top |
Exon skipping events with PSI in TCGA for CCL28 |
| ∗Please access ExonSkipDB for exon skipping annotation. |
Landscape of exon skipping events across multiple cancer types. |
Differentially expressed exon skipping events between male tumor and female tumor patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
Differentially expressed exon skipping events between male tumor and male normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
Differentially expressed exon skipping events between female tumor and female normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
Top |
RNA A-to-I editing events in TCGA for CCL28 |
| ∗Please access CAeditome for RNA editing annotation. |
Landscape of RNA editing events across multiple cancer types. |
Differentially expressed RNA editing events between male tumor and female tumor patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| KIRC | CCL28-001 | chr5_43377370_- | 1.87e-01 | 2.21e-01 | -2.34e+00 | 1.93e-02 | 4.45e-02 | -3.35e-02 |
| KIRC | CCL28-001 | chr5_43377380_- | 2.88e-01 | 2.52e-01 | 2.54e+00 | 1.12e-02 | 4.20e-02 | 3.57e-02 |
| KIRC | CCL28-001 | chr5_43377392_- | 1.94e-01 | 2.23e-01 | -2.30e+00 | 2.15e-02 | 4.55e-02 | -2.91e-02 |
| KIRC | CCL28-001 | chr5_43377440_- | 3.39e-01 | 3.14e-01 | 2.38e+00 | 1.72e-02 | 4.41e-02 | 2.46e-02 |
| KIRC | CCL28-001 | chr5_43378852_- | 2.13e-01 | 1.90e-01 | 2.17e+00 | 3.00e-02 | 4.67e-02 | 2.24e-02 |
| KIRC | CCL28-003 | chr5_43381556_- | 1.31e-01 | 1.73e-01 | -1.97e+00 | 4.84e-02 | 4.97e-02 | -4.21e-02 |
| LUAD | CCL28-001 | chr5_43378839_- | 1.75e-01 | 2.28e-01 | -2.32e+00 | 2.01e-02 | 3.80e-02 | -5.31e-02 |
| THCA | CCL28-001 | chr5_43378839_- | 2.03e-01 | 1.55e-01 | 2.24e+00 | 2.50e-02 | 4.91e-02 | 4.76e-02 |
| THCA | CCL28-001 | chr5_43380707_- | 1.88e-01 | 1.42e-01 | 2.15e+00 | 3.19e-02 | 4.91e-02 | 4.65e-02 |
| THCA | CCL28-003 | chr5_43381559_- | 1.88e-01 | 1.63e-01 | 2.80e+00 | 5.18e-03 | 4.77e-02 | 2.52e-02 |
| THCA | CCL28-003 | chr5_43381597_- | 3.21e-01 | 2.92e-01 | 2.40e+00 | 1.64e-02 | 4.91e-02 | 2.88e-02 |
| THCA | CCL28-003 | chr5_43381606_- | 3.14e-01 | 2.82e-01 | 2.35e+00 | 1.89e-02 | 4.91e-02 | 3.26e-02 |
| HNSC | CCL28-001 | chr5_43378861_- | 3.21e-01 | 2.42e-01 | 2.07e+00 | 3.84e-02 | 4.59e-02 | 7.92e-02 |
| LUSC | CCL28-001 | chr5_43380806_- | 1.79e-01 | 2.46e-01 | -2.69e+00 | 7.11e-03 | 4.91e-02 | -6.72e-02 |
| SKCM | CCL28-001 | chr5_43377335_- | 1.88e-01 | 1.23e-01 | 1.97e+00 | 4.92e-02 | 4.95e-02 | 6.52e-02 |
| SKCM | CCL28-001 | chr5_43378849_- | 4.15e-01 | 3.79e-01 | 1.98e+00 | 4.80e-02 | 4.91e-02 | 3.67e-02 |
| SKCM | CCL28-001 | chr5_43380584_- | 1.28e-01 | 1.84e-01 | -2.76e+00 | 5.70e-03 | 4.90e-02 | -5.58e-02 |
| SKCM | CCL28-003 | chr5_43381511_- | 2.21e-01 | 2.47e-01 | -1.99e+00 | 4.65e-02 | 4.90e-02 | -2.62e-02 |
| STAD | CCL28-001 | chr5_43380621_- | 1.81e-01 | 2.16e-01 | -2.20e+00 | 2.78e-02 | 4.96e-02 | -3.45e-02 |
| LIHC | CCL28-001 | chr5_43377409_- | 2.28e-01 | 1.47e-01 | 2.13e+00 | 3.29e-02 | 4.63e-02 | 8.09e-02 |
| LIHC | CCL28-003 | chr5_43381462_- | 2.52e-01 | 3.04e-01 | -2.42e+00 | 1.57e-02 | 4.30e-02 | -5.18e-02 |
| LIHC | CCL28-003 | chr5_43381559_- | 2.60e-01 | 1.91e-01 | 2.02e+00 | 4.29e-02 | 4.82e-02 | 6.89e-02 |
| KIRP | CCL28-001 | chr5_43378849_- | 4.13e-01 | 3.33e-01 | 3.59e+00 | 3.37e-04 | 2.82e-02 | 7.93e-02 |
| KIRP | CCL28-003 | chr5_43381639_- | 3.71e-01 | 3.36e-01 | 2.14e+00 | 3.20e-02 | 4.72e-02 | 3.47e-02 |
| SARC | CCL28-001 | chr5_43377286_- | 2.06e-01 | 2.96e-01 | -2.25e+00 | 2.48e-02 | 4.85e-02 | -9.03e-02 |
| PAAD | CCL28-001 | chr5_43377392_- | 1.52e-01 | 2.39e-01 | -2.79e+00 | 5.26e-03 | 4.66e-02 | -8.65e-02 |
| PAAD | CCL28-001 | chr5_43377440_- | 2.92e-01 | 3.96e-01 | -3.76e+00 | 1.71e-04 | 4.66e-02 | -1.03e-01 |
| PAAD | CCL28-003 | chr5_43381497_- | 1.31e-01 | 1.81e-01 | -3.13e+00 | 1.73e-03 | 4.66e-02 | -5.03e-02 |
| READ | CCL28-003 | chr5_43381462_- | 2.01e-01 | 1.58e-01 | 2.41e+00 | 1.59e-02 | 4.85e-02 | 4.28e-02 |
| ESCA | CCL28-001 | chr5_43377380_- | 2.52e-01 | 3.13e-01 | -2.12e+00 | 3.38e-02 | 4.99e-02 | -6.09e-02 |
| UVM | CCL28-001 | chr5_43377286_- | 1.73e-01 | 2.35e-01 | -2.24e+00 | 2.50e-02 | 4.93e-02 | -6.21e-02 |
Differentially expressed RNA editing events between male tumor and male normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| KIRC | CCL28-003 | chr5_43381498_- | 2.13e-01 | 1.68e-01 | 3.16e+00 | 1.57e-03 | 5.07e-03 | 4.53e-02 |
| KIRC | CCL28-003 | chr5_43381606_- | 3.33e-01 | 2.74e-01 | 2.88e+00 | 3.94e-03 | 9.67e-03 | 5.87e-02 |
| THCA | CCL28-001 | chr5_43378861_- | 2.41e-01 | 1.69e-01 | 2.58e+00 | 9.92e-03 | 1.89e-02 | 7.22e-02 |
| THCA | CCL28-001 | chr5_43378878_- | 2.35e-01 | 1.64e-01 | 2.88e+00 | 4.01e-03 | 1.08e-02 | 7.12e-02 |
| HNSC | CCL28-001 | chr5_43377286_- | 2.57e-01 | 1.70e-01 | 3.11e+00 | 1.86e-03 | 3.69e-03 | 8.75e-02 |
| HNSC | CCL28-001 | chr5_43377288_- | 2.78e-01 | 1.20e-01 | 2.84e+00 | 4.48e-03 | 7.42e-03 | 1.58e-01 |
| HNSC | CCL28-001 | chr5_43377383_- | 2.77e-01 | 1.38e-01 | 2.19e+00 | 2.83e-02 | 3.19e-02 | 1.39e-01 |
| HNSC | CCL28-001 | chr5_43378852_- | 2.80e-01 | 1.60e-01 | 2.87e+00 | 4.14e-03 | 6.95e-03 | 1.20e-01 |
| HNSC | CCL28-001 | chr5_43378861_- | 3.21e-01 | 1.97e-01 | 3.19e+00 | 1.42e-03 | 3.00e-03 | 1.24e-01 |
| HNSC | CCL28-001 | chr5_43378874_- | 2.37e-01 | 1.52e-01 | 2.72e+00 | 6.43e-03 | 9.87e-03 | 8.55e-02 |
| HNSC | CCL28-001 | chr5_43380635_- | 2.67e-01 | 1.74e-01 | 2.62e+00 | 8.75e-03 | 1.27e-02 | 9.30e-02 |
| HNSC | CCL28-001 | chr5_43380716_- | 2.47e-01 | 1.88e-01 | 2.67e+00 | 7.48e-03 | 1.11e-02 | 5.87e-02 |
| HNSC | CCL28-001 | chr5_43380806_- | 1.84e-01 | 1.25e-01 | 2.16e+00 | 3.07e-02 | 3.40e-02 | 5.89e-02 |
| LUSC | CCL28-001 | chr5_43380598_- | 1.82e-01 | 3.04e-01 | -2.99e+00 | 2.80e-03 | 8.80e-03 | -1.22e-01 |
| LUSC | CCL28-003 | chr5_43381462_- | 2.13e-01 | 2.72e-01 | -2.55e+00 | 1.08e-02 | 2.03e-02 | -5.92e-02 |
| LUSC | CCL28-003 | chr5_43381511_- | 2.46e-01 | 3.87e-01 | -3.01e+00 | 2.61e-03 | 8.42e-03 | -1.40e-01 |
| COAD | CCL28-001 | chr5_43378874_- | 2.38e-01 | 1.68e-01 | 2.51e+00 | 1.20e-02 | 1.94e-02 | 7.06e-02 |
| COAD | CCL28-001 | chr5_43378878_- | 2.17e-01 | 1.43e-01 | 3.35e+00 | 8.15e-04 | 3.78e-03 | 7.39e-02 |
| COAD | CCL28-001 | chr5_43380715_- | 2.46e-01 | 1.79e-01 | 2.05e+00 | 4.08e-02 | 4.33e-02 | 6.69e-02 |
| COAD | CCL28-001 | chr5_43380719_- | 3.36e-01 | 2.66e-01 | 2.72e+00 | 6.43e-03 | 1.34e-02 | 6.98e-02 |
| COAD | CCL28-001 | chr5_43380720_- | 2.43e-01 | 1.82e-01 | 2.89e+00 | 3.91e-03 | 9.61e-03 | 6.08e-02 |
| STAD | CCL28-001 | chr5_43380583_- | 2.26e-01 | 1.65e-01 | 2.05e+00 | 4.00e-02 | 4.51e-02 | 6.13e-02 |
| STAD | CCL28-001 | chr5_43380716_- | 2.96e-01 | 2.06e-01 | 2.71e+00 | 6.64e-03 | 1.96e-02 | 9.00e-02 |
| KIRP | CCL28-001 | chr5_43377440_- | 3.11e-01 | 4.55e-01 | -2.65e+00 | 8.07e-03 | 2.00e-02 | -1.43e-01 |
| KIRP | CCL28-001 | chr5_43380719_- | 2.53e-01 | 3.62e-01 | -2.67e+00 | 7.61e-03 | 1.95e-02 | -1.08e-01 |
| ESCA | CCL28-001 | chr5_43380719_- | 3.97e-01 | 2.81e-01 | 2.09e+00 | 3.69e-02 | 4.19e-02 | 1.16e-01 |
Differentially expressed RNA editing events between female tumor and female normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| BRCA | CCL28-001 | chr5_43377286_- | 2.51e-01 | 2.04e-01 | 4.98e+00 | 6.35e-07 | 2.47e-06 | 4.78e-02 |
| BRCA | CCL28-001 | chr5_43377287_- | 1.74e-01 | 1.24e-01 | 3.63e+00 | 2.80e-04 | 6.31e-04 | 4.96e-02 |
| BRCA | CCL28-001 | chr5_43377288_- | 2.04e-01 | 1.52e-01 | 5.18e+00 | 2.21e-07 | 9.31e-07 | 5.20e-02 |
| BRCA | CCL28-001 | chr5_43377308_- | 1.92e-01 | 1.27e-01 | 6.61e+00 | 3.91e-11 | 2.98e-10 | 6.49e-02 |
| BRCA | CCL28-001 | chr5_43377344_- | 1.67e-01 | 1.26e-01 | 3.31e+00 | 9.37e-04 | 1.84e-03 | 4.11e-02 |
| BRCA | CCL28-001 | chr5_43377370_- | 1.92e-01 | 1.32e-01 | 4.88e+00 | 1.06e-06 | 3.99e-06 | 6.01e-02 |
| BRCA | CCL28-001 | chr5_43377380_- | 2.76e-01 | 1.98e-01 | 6.93e+00 | 4.07e-12 | 3.54e-11 | 7.83e-02 |
| BRCA | CCL28-001 | chr5_43377383_- | 2.41e-01 | 1.47e-01 | 8.35e+00 | 6.88e-17 | 1.15e-15 | 9.42e-02 |
| BRCA | CCL28-001 | chr5_43377392_- | 2.34e-01 | 1.74e-01 | 5.22e+00 | 1.82e-07 | 7.83e-07 | 5.90e-02 |
| BRCA | CCL28-001 | chr5_43377409_- | 1.74e-01 | 1.24e-01 | 2.39e+00 | 1.67e-02 | 2.13e-02 | 5.02e-02 |
| BRCA | CCL28-001 | chr5_43377440_- | 3.27e-01 | 2.67e-01 | 4.96e+00 | 6.96e-07 | 2.69e-06 | 5.99e-02 |
| BRCA | CCL28-001 | chr5_43377448_- | 1.66e-01 | 1.22e-01 | 2.56e+00 | 1.05e-02 | 1.46e-02 | 4.36e-02 |
| BRCA | CCL28-001 | chr5_43377473_- | 2.36e-01 | 1.44e-01 | 7.99e+00 | 1.37e-15 | 1.96e-14 | 9.19e-02 |
| BRCA | CCL28-001 | chr5_43377478_- | 2.50e-01 | 1.82e-01 | 5.61e+00 | 1.97e-08 | 1.00e-07 | 6.72e-02 |
| BRCA | CCL28-001 | chr5_43377486_- | 1.81e-01 | 1.17e-01 | 2.10e+00 | 3.59e-02 | 3.87e-02 | 6.36e-02 |
| BRCA | CCL28-001 | chr5_43378086_- | 1.95e-01 | 1.20e-01 | 2.35e+00 | 1.88e-02 | 2.33e-02 | 7.56e-02 |
| BRCA | CCL28-001 | chr5_43378098_- | 4.06e-01 | 2.35e-01 | 7.47e+00 | 7.93e-14 | 8.89e-13 | 1.71e-01 |
| BRCA | CCL28-001 | chr5_43378099_- | 3.20e-01 | 1.51e-01 | 6.03e+00 | 1.59e-09 | 9.45e-09 | 1.69e-01 |
| BRCA | CCL28-001 | chr5_43378151_- | 2.75e-01 | 1.65e-01 | 4.16e+00 | 3.24e-05 | 8.99e-05 | 1.10e-01 |
| BRCA | CCL28-001 | chr5_43378171_- | 4.40e-01 | 2.70e-01 | 7.55e+00 | 4.19e-14 | 4.91e-13 | 1.70e-01 |
| BRCA | CCL28-001 | chr5_43378229_- | 3.08e-01 | 2.18e-01 | 5.89e+00 | 3.85e-09 | 2.18e-08 | 9.06e-02 |
| BRCA | CCL28-001 | chr5_43378239_- | 2.13e-01 | 1.75e-01 | 3.19e+00 | 1.41e-03 | 2.62e-03 | 3.77e-02 |
| BRCA | CCL28-001 | chr5_43378256_- | 2.79e-01 | 1.97e-01 | 6.31e+00 | 2.72e-10 | 1.83e-09 | 8.19e-02 |
| BRCA | CCL28-001 | chr5_43378264_- | 1.94e-01 | 1.16e-01 | 3.02e+00 | 2.55e-03 | 4.39e-03 | 7.74e-02 |
| BRCA | CCL28-001 | chr5_43378345_- | 3.89e-01 | 2.54e-01 | 7.96e+00 | 1.70e-15 | 2.42e-14 | 1.36e-01 |
| BRCA | CCL28-001 | chr5_43378849_- | 3.84e-01 | 3.32e-01 | 3.34e+00 | 8.37e-04 | 1.67e-03 | 5.20e-02 |
| BRCA | CCL28-001 | chr5_43378852_- | 2.34e-01 | 1.66e-01 | 6.07e+00 | 1.29e-09 | 7.81e-09 | 6.89e-02 |
| BRCA | CCL28-001 | chr5_43378861_- | 2.84e-01 | 2.50e-01 | 2.04e+00 | 4.11e-02 | 4.31e-02 | 3.40e-02 |
| BRCA | CCL28-001 | chr5_43378874_- | 2.51e-01 | 1.92e-01 | 5.46e+00 | 4.76e-08 | 2.26e-07 | 5.90e-02 |
| BRCA | CCL28-001 | chr5_43378878_- | 2.36e-01 | 1.70e-01 | 6.01e+00 | 1.80e-09 | 1.06e-08 | 6.53e-02 |
| BRCA | CCL28-001 | chr5_43380583_- | 1.95e-01 | 1.19e-01 | 3.33e+00 | 8.80e-04 | 1.75e-03 | 7.58e-02 |
| BRCA | CCL28-001 | chr5_43380598_- | 1.83e-01 | 1.31e-01 | 4.92e+00 | 8.83e-07 | 3.36e-06 | 5.13e-02 |
| BRCA | CCL28-001 | chr5_43380635_- | 2.48e-01 | 1.33e-01 | 9.82e+00 | 9.30e-23 | 3.49e-21 | 1.15e-01 |
| BRCA | CCL28-001 | chr5_43380715_- | 2.52e-01 | 1.50e-01 | 6.65e+00 | 2.96e-11 | 2.29e-10 | 1.02e-01 |
| BRCA | CCL28-001 | chr5_43380716_- | 2.68e-01 | 1.47e-01 | 1.10e+01 | 4.14e-28 | 3.58e-26 | 1.21e-01 |
| BRCA | CCL28-001 | chr5_43380719_- | 3.67e-01 | 2.51e-01 | 8.33e+00 | 8.20e-17 | 1.35e-15 | 1.16e-01 |
| BRCA | CCL28-001 | chr5_43380720_- | 2.71e-01 | 1.44e-01 | 9.38e+00 | 6.37e-21 | 1.76e-19 | 1.28e-01 |
| BRCA | CCL28-001 | chr5_43380806_- | 1.97e-01 | 1.36e-01 | 4.20e+00 | 2.63e-05 | 7.46e-05 | 6.14e-02 |
| BRCA | CCL28-003 | chr5_43381462_- | 2.27e-01 | 1.40e-01 | 1.00e+01 | 1.47e-23 | 6.10e-22 | 8.65e-02 |
| BRCA | CCL28-003 | chr5_43381497_- | 1.76e-01 | 1.37e-01 | 3.98e+00 | 6.97e-05 | 1.80e-04 | 3.86e-02 |
| BRCA | CCL28-003 | chr5_43381498_- | 2.25e-01 | 1.43e-01 | 7.18e+00 | 7.22e-13 | 7.03e-12 | 8.10e-02 |
| BRCA | CCL28-003 | chr5_43381511_- | 2.67e-01 | 1.93e-01 | 7.48e+00 | 7.44e-14 | 8.41e-13 | 7.44e-02 |
| BRCA | CCL28-003 | chr5_43381559_- | 2.06e-01 | 1.28e-01 | 7.74e+00 | 9.81e-15 | 1.24e-13 | 7.82e-02 |
| BRCA | CCL28-003 | chr5_43381597_- | 3.23e-01 | 2.24e-01 | 8.62e+00 | 6.63e-18 | 1.25e-16 | 9.91e-02 |
| BRCA | CCL28-003 | chr5_43381606_- | 3.21e-01 | 2.16e-01 | 9.66e+00 | 4.51e-22 | 1.54e-20 | 1.05e-01 |
| KIRC | CCL28-003 | chr5_43381511_- | 2.77e-01 | 1.91e-01 | 2.31e+00 | 2.07e-02 | 3.34e-02 | 8.61e-02 |
| THCA | CCL28-001 | chr5_43377286_- | 2.59e-01 | 2.09e-01 | 3.03e+00 | 2.46e-03 | 6.49e-03 | 4.94e-02 |
| THCA | CCL28-001 | chr5_43377409_- | 1.76e-01 | 1.43e-01 | 2.07e+00 | 3.84e-02 | 4.22e-02 | 3.32e-02 |
| THCA | CCL28-001 | chr5_43377440_- | 3.09e-01 | 2.67e-01 | 2.65e+00 | 7.97e-03 | 1.47e-02 | 4.12e-02 |
| THCA | CCL28-001 | chr5_43377473_- | 2.24e-01 | 1.91e-01 | 2.34e+00 | 1.90e-02 | 2.61e-02 | 3.34e-02 |
| THCA | CCL28-001 | chr5_43378268_- | 2.60e-01 | 1.37e-01 | 3.37e+00 | 7.54e-04 | 2.78e-03 | 1.23e-01 |
| THCA | CCL28-001 | chr5_43378345_- | 3.88e-01 | 3.13e-01 | 2.32e+00 | 2.03e-02 | 2.72e-02 | 7.49e-02 |
| THCA | CCL28-001 | chr5_43380583_- | 1.80e-01 | 1.27e-01 | 2.21e+00 | 2.68e-02 | 3.32e-02 | 5.25e-02 |
| THCA | CCL28-001 | chr5_43380715_- | 2.41e-01 | 1.72e-01 | 3.18e+00 | 1.49e-03 | 4.56e-03 | 6.83e-02 |
| THCA | CCL28-001 | chr5_43380716_- | 2.46e-01 | 1.62e-01 | 4.49e+00 | 7.03e-06 | 8.71e-05 | 8.39e-02 |
| THCA | CCL28-001 | chr5_43380719_- | 3.14e-01 | 2.41e-01 | 3.78e+00 | 1.60e-04 | 8.79e-04 | 7.29e-02 |
| THCA | CCL28-001 | chr5_43380720_- | 2.22e-01 | 1.70e-01 | 2.98e+00 | 2.86e-03 | 7.21e-03 | 5.17e-02 |
| THCA | CCL28-001 | chr5_43380806_- | 1.91e-01 | 1.40e-01 | 3.41e+00 | 6.54e-04 | 2.52e-03 | 5.06e-02 |
| THCA | CCL28-003 | chr5_43381497_- | 1.53e-01 | 1.19e-01 | 2.34e+00 | 1.91e-02 | 2.62e-02 | 3.37e-02 |
| THCA | CCL28-003 | chr5_43381498_- | 2.02e-01 | 1.51e-01 | 3.38e+00 | 7.23e-04 | 2.71e-03 | 5.11e-02 |
| HNSC | CCL28-001 | chr5_43377440_- | 3.03e-01 | 2.27e-01 | 2.08e+00 | 3.73e-02 | 4.09e-02 | 7.54e-02 |
| COAD | CCL28-001 | chr5_43377288_- | 2.21e-01 | 1.60e-01 | 2.12e+00 | 3.43e-02 | 4.01e-02 | 6.07e-02 |
| COAD | CCL28-001 | chr5_43377380_- | 3.33e-01 | 2.14e-01 | 2.00e+00 | 4.54e-02 | 4.70e-02 | 1.19e-01 |
| COAD | CCL28-001 | chr5_43377392_- | 2.74e-01 | 1.91e-01 | 2.36e+00 | 1.84e-02 | 2.82e-02 | 8.35e-02 |
| COAD | CCL28-001 | chr5_43377409_- | 1.93e-01 | 1.24e-01 | 2.89e+00 | 3.81e-03 | 1.20e-02 | 6.95e-02 |
| COAD | CCL28-001 | chr5_43377478_- | 2.93e-01 | 2.02e-01 | 2.06e+00 | 3.93e-02 | 4.26e-02 | 9.07e-02 |
| STAD | CCL28-003 | chr5_43381559_- | 2.42e-01 | 1.64e-01 | 2.09e+00 | 3.68e-02 | 4.45e-02 | 7.80e-02 |
| READ | CCL28-003 | chr5_43381597_- | 3.45e-01 | 2.33e-01 | 2.31e+00 | 2.09e-02 | 4.19e-02 | 1.12e-01 |
Protein coding RNA editing(s). |
| Editing Position | Variant Type | Gene Symbol | Transcript ID | NTchange | AAchange |
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Sex-biased TF-Gene network for CCL28 |
TFs related to CCL28.∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
| Cancer Type | TF | Target Gene | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| CHOL | ZNF418 | CCL28 | 3.03e+00 | 2.12e-03 | 4.35e+00 | 9.91e-01 | Female-biased |
| CHOL | ZNF716 | CCL28 | 3.63e+00 | 1.34e-02 | 4.48e+00 | 9.81e-01 | Female-biased |
| CHOL | ZNF879 | CCL28 | 2.80e+00 | 4.10e-03 | 3.94e+00 | 9.82e-01 | Female-biased |
| PAAD | BARX1 | CCL28 | 5.08e+00 | 9.88e-01 | 4.22e+00 | 8.79e-03 | Male-biased |
| PAAD | BPTF | CCL28 | 4.46e+00 | 9.92e-01 | 3.23e+00 | 1.27e-03 | Male-biased |
| PAAD | CDX2 | CCL28 | 4.77e+00 | 9.92e-01 | 3.71e+00 | 3.25e-03 | Male-biased |
| PAAD | EVX2 | CCL28 | 4.79e+00 | 9.92e-01 | 3.76e+00 | 3.73e-03 | Male-biased |
| PAAD | FEZF1 | CCL28 | 4.13e+00 | 9.85e-01 | 3.08e+00 | 3.16e-03 | Male-biased |
| PAAD | HSFY1 | CCL28 | 5.50e+00 | 9.83e-01 | 4.76e+00 | 1.56e-02 | Male-biased |
| PAAD | HSFY2 | CCL28 | 5.43e+00 | 9.89e-01 | 4.57e+00 | 8.91e-03 | Male-biased |
| PAAD | MSX1 | CCL28 | 5.15e+00 | 9.92e-01 | 4.18e+00 | 5.07e-03 | Male-biased |
| PAAD | MSX2 | CCL28 | 5.10e+00 | 9.91e-01 | 4.17e+00 | 6.27e-03 | Male-biased |
| PAAD | NKX6-1 | CCL28 | 4.49e+00 | 9.90e-01 | 3.43e+00 | 3.17e-03 | Male-biased |
| PAAD | POU2F2 | CCL28 | 4.92e+00 | 9.93e-01 | 3.88e+00 | 3.49e-03 | Male-biased |
| PAAD | POU5F1 | CCL28 | 4.92e+00 | 9.93e-01 | 3.89e+00 | 3.78e-03 | Male-biased |
| PAAD | TBX6 | CCL28 | 4.55e+00 | 9.84e-01 | 3.70e+00 | 9.48e-03 | Male-biased |
| PAAD | YY1 | CCL28 | 4.72e+00 | 9.87e-01 | 3.85e+00 | 8.38e-03 | Male-biased |
| PAAD | ZFP82 | CCL28 | 4.61e+00 | 9.92e-01 | 3.50e+00 | 2.50e-03 | Male-biased |
| PAAD | ZNF33B | CCL28 | 4.97e+00 | 9.95e-01 | 3.74e+00 | 1.35e-03 | Male-biased |
| PAAD | ZNF433 | CCL28 | 5.58e+00 | 9.82e-01 | 4.84e+00 | 1.64e-02 | Male-biased |
| PAAD | ZNF442 | CCL28 | 4.36e+00 | 9.82e-01 | 3.52e+00 | 9.72e-03 | Male-biased |
| PAAD | ZNF716 | CCL28 | 4.67e+00 | 9.92e-01 | 3.57e+00 | 2.62e-03 | Male-biased |
| PAAD | ZNF730 | CCL28 | 4.27e+00 | 9.82e-01 | 3.40e+00 | 8.36e-03 | Male-biased |
| PCPG | NKX6-1 | CCL28 | 3.20e+00 | 6.84e-03 | 4.08e+00 | 9.81e-01 | Female-biased |
| PCPG | ZFP82 | CCL28 | 3.26e+00 | 6.94e-03 | 4.14e+00 | 9.82e-01 | Female-biased |
| PCPG | ZNF33B | CCL28 | 3.70e+00 | 9.33e-03 | 4.52e+00 | 9.85e-01 | Female-biased |
| SKCM | ZNF418 | CCL28 | 3.93e+00 | 6.82e-03 | 5.04e+00 | 9.87e-01 | Female-biased |
| THYM | CDX2 | CCL28 | 4.27e+00 | 8.53e-03 | 5.00e+00 | 9.88e-01 | Female-biased |
| THYM | EVX2 | CCL28 | 4.29e+00 | 9.19e-03 | 5.00e+00 | 9.87e-01 | Female-biased |
| THYM | HSFY2 | CCL28 | 4.91e+00 | 1.53e-02 | 5.50e+00 | 9.83e-01 | Female-biased |
| THYM | MSX1 | CCL28 | 4.76e+00 | 9.57e-03 | 5.47e+00 | 9.89e-01 | Female-biased |
| THYM | MSX2 | CCL28 | 4.76e+00 | 1.20e-02 | 5.41e+00 | 9.86e-01 | Female-biased |
| THYM | NKX6-1 | CCL28 | 4.31e+00 | 6.55e-03 | 5.11e+00 | 9.90e-01 | Female-biased |
| THYM | POU2F2 | CCL28 | 4.39e+00 | 9.93e-03 | 5.08e+00 | 9.87e-01 | Female-biased |
| THYM | POU5F1 | CCL28 | 4.47e+00 | 1.31e-02 | 5.10e+00 | 9.84e-01 | Female-biased |
| THYM | ZFP82 | CCL28 | 4.12e+00 | 5.73e-03 | 4.95e+00 | 9.90e-01 | Female-biased |
| THYM | ZNF33B | CCL28 | 4.25e+00 | 3.92e-03 | 5.17e+00 | 9.93e-01 | Female-biased |
| THYM | ZNF418 | CCL28 | 4.27e+00 | 1.38e-03 | 5.46e+00 | 9.97e-01 | Female-biased |
| THYM | ZNF716 | CCL28 | 3.98e+00 | 3.49e-03 | 4.93e+00 | 9.92e-01 | Female-biased |
| THYM | ZNF879 | CCL28 | 3.91e+00 | 3.26e-03 | 4.88e+00 | 9.92e-01 | Female-biased |
CCL28 related gene.∗Only the gene encode TF might with this result. ∗For more information please check Sex-biased TF-Coding gene network. |
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Sex-biased RBP-ES network for CCL28 |
RBPs related to ES in CCL28.∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
| Cancer Type | RBP | Target ES | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
CCL28 related ES.∗Only the gene encode RBP might with this result. ∗For more information please check Sex-biased RBP-ES network in cancer. |
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Sex-biased CeRNA regulation of gene |
Sex-biased CeRNA regulation of gene. |
| Gene ID | ceRNA(lncRNA-miRNA-mRNA) | Group | Cancer Type |
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Sex-biased eQTL regulation of gene |
Sex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| eQTL | Description |
Male-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs11742761 | chr5:44301065:A:G | - | 0.147615261010131 | 0.0430786141384477 | READ | Female-baised eQTL |
| rs17316984 | chr5:44315272:C:T | - | 0.147615261010131 | 0.0430786141384477 | READ | Female-baised eQTL |
| rs17234191 | chr5:44347482:G:A | - | 0.147615261010131 | 0.0430786141384477 | READ | Female-baised eQTL |
| rs11743802 | chr5:44351052:T:C | - | 0.147615261010131 | 0.0430786141384477 | READ | Female-baised eQTL |
| rs10512849 | chr5:44384121:C:T | - | 0.147615261010131 | 0.0430786141384477 | READ | Female-baised eQTL |
| rs72750760 | chr5:52688575:C:T | - | 0.139373661324363 | 0.000135565948509336 | LIHC | Female-baised eQTL |
| rs140773865 | chr5:52643388:A:G | - | 0.128260064280127 | 0.000350980450974262 | LIHC | Female-baised eQTL |
| rs2648732 | chr5:52776330:A:G | - | -0.124198236546492 | 0.000908843547828471 | LIHC | Female-baised eQTL |
| rs79743638 | chr5:52814738:A:G | - | 0.123967035698453 | 0.000950613658643421 | LIHC | Female-baised eQTL |
| rs3096173 | chr5:52780456:A:G | - | -0.117010481621538 | 0.00230130988872328 | LIHC | Female-baised eQTL |
| rs76255385 | chr5:52815327:G:A | - | 0.117010481621538 | 0.00230130988872328 | LIHC | Female-baised eQTL |
| rs16880238 | chr5:52786729:A:C | - | 0.111085146980148 | 0.00456054044481931 | LIHC | Female-baised eQTL |
| rs1363958 | chr5:52775763:T:C | - | -0.105583237060079 | 0.00861970002431557 | LIHC | Female-baised eQTL |
| rs2648733 | chr5:52775826:A:G | - | -0.105583237060079 | 0.00861970002431557 | LIHC | Female-baised eQTL |
| rs72752550 | chr5:52725159:G:A | - | 0.103953605761181 | 0.00863147985167186 | LIHC | Female-baised eQTL |
| rs72752556 | chr5:52727951:G:A | - | 0.103953605761181 | 0.00863147985167186 | LIHC | Female-baised eQTL |
| rs72752560 | chr5:52729807:C:T | - | 0.103953605761181 | 0.00863147985167186 | LIHC | Female-baised eQTL |
| rs72752561 | chr5:52731100:G:A | - | 0.103953605761181 | 0.00863147985167186 | LIHC | Female-baised eQTL |
| rs72752562 | chr5:52732635:C:T | - | 0.103953605761181 | 0.00863147985167186 | LIHC | Female-baised eQTL |
| rs56926375 | chr5:52733211:G:T | - | 0.103953605761181 | 0.00863147985167186 | LIHC | Female-baised eQTL |
| rs55673164 | chr5:52736089:C:T | - | 0.103953605761181 | 0.00863147985167186 | LIHC | Female-baised eQTL |
| rs72752564 | chr5:52736654:A:G | - | 0.103953605761181 | 0.00863147985167186 | LIHC | Female-baised eQTL |
| rs72752565 | chr5:52737196:C:T | - | 0.103953605761181 | 0.00863147985167186 | LIHC | Female-baised eQTL |
| rs72752567 | chr5:52738202:G:T | - | 0.103953605761181 | 0.00863147985167186 | LIHC | Female-baised eQTL |
| rs2548504 | chr5:52775155:A:G | - | -0.105538597531968 | 0.00875565526989584 | LIHC | Female-baised eQTL |
| rs2548503 | chr5:52775205:T:C | - | -0.105538597531968 | 0.00875565526989584 | LIHC | Female-baised eQTL |
| rs1363961 | chr5:52775365:G:A | - | -0.105538597531968 | 0.00875565526989584 | LIHC | Female-baised eQTL |
| rs1363960 | chr5:52775390:G:A | - | -0.105538597531968 | 0.00875565526989584 | LIHC | Female-baised eQTL |
| rs1363959 | chr5:52775537:C:A | - | -0.105538597531968 | 0.00875565526989584 | LIHC | Female-baised eQTL |
| rs72752532 | chr5:52705921:A:G | - | 0.103955110667318 | 0.00875565526989584 | LIHC | Female-baised eQTL |
| rs61561406 | chr5:52711757:A:G | - | 0.103955110667318 | 0.00875565526989584 | LIHC | Female-baised eQTL |
| rs58717249 | chr5:52717716:G:C | - | 0.103955110667318 | 0.00875565526989584 | LIHC | Female-baised eQTL |
| rs184643180 | chr5:52719768:C:T | - | 0.103955110667318 | 0.00875565526989584 | LIHC | Female-baised eQTL |
| rs140681849 | chr5:52721177:C:T | - | 0.103898025320993 | 0.00878594268660163 | LIHC | Female-baised eQTL |
| rs111276746 | chr5:52723169:A:T | - | 0.103898025320993 | 0.00878594268660163 | LIHC | Female-baised eQTL |
| rs1833884 | chr5:52774720:G:A | - | -0.0954334170038335 | 0.0199129856560898 | LIHC | Female-baised eQTL |
| rs1833883 | chr5:52774727:T:C | - | -0.0954334170038335 | 0.0199129856560898 | LIHC | Female-baised eQTL |
| rs2548506 | chr5:52775081:G:A | - | -0.0875946180810064 | 0.0418257908519705 | LIHC | Female-baised eQTL |
| rs2548505 | chr5:52775096:A:G | - | -0.0875457144698745 | 0.042217476298172 | LIHC | Female-baised eQTL |
| rs840390 | chr5:34018518:G:A | - | 0.117704671229826 | 0.00276544308273112 | BLCA | Female-baised eQTL |
| rs253190 | chr5:33994759:G:A | - | 0.118335618919284 | 0.005656168078036 | BLCA | Female-baised eQTL |
| rs183670 | chr5:33992156:G:A | - | 0.120640147194162 | 0.00593327465558692 | BLCA | Female-baised eQTL |
| rs171681 | chr5:33992349:T:C | - | 0.120640147194162 | 0.00593327465558692 | BLCA | Female-baised eQTL |
| rs253197 | chr5:34010407:A:G | - | 0.107501672961281 | 0.00855953644767437 | BLCA | Female-baised eQTL |
| rs253199 | chr5:34011568:G:A | - | 0.107501672961281 | 0.00855953644767437 | BLCA | Female-baised eQTL |
| rs253201 | chr5:34013155:G:C | - | 0.107501672961281 | 0.00855953644767437 | BLCA | Female-baised eQTL |
| rs34677 | chr5:33998663:C:A | - | 0.0992562727516002 | 0.0232504643042119 | BLCA | Female-baised eQTL |
| rs253193 | chr5:34009916:C:T | - | 0.0869160350262399 | 0.0307626768478443 | BLCA | Female-baised eQTL |
| rs253194 | chr5:34009949:A:G | - | 0.0869160350262399 | 0.0307626768478443 | BLCA | Female-baised eQTL |
| rs253195 | chr5:34010201:T:C | - | 0.0869160350262399 | 0.0307626768478443 | BLCA | Female-baised eQTL |
| rs253196 | chr5:34010211:G:A | - | 0.0869160350262399 | 0.0307626768478443 | BLCA | Female-baised eQTL |
| rs253198 | chr5:34010534:T:C | - | 0.0869160350262399 | 0.0307626768478443 | BLCA | Female-baised eQTL |
| rs190418 | chr5:34011251:G:T | - | 0.0869160350262399 | 0.0307626768478443 | BLCA | Female-baised eQTL |
| rs12520359 | chr5:33930369:T:A | - | 0.0854123664631207 | 0.017429530045676 | LUAD | Female-baised eQTL |
| rs13177154 | chr5:35667805:C:A | - | 0.0325664293559674 | 0.0482064939728021 | LUAD | Female-baised eQTL |
| rs17393674 | chr5:37075819:A:T | - | 0.1514533251926 | 0.00556820982905452 | COAD | Female-baised eQTL |
Female-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs62360370 | chr5:37814387:G:A | - | 0.0995584592842703 | 0.00860782388078635 | BLCA | Male-baised eQTL |
| rs150738565 | chr5:42933305:G:A | - | 0.0777716682081475 | 0.0104567568076511 | BLCA | Male-baised eQTL |
| rs34426657 | chr5:42935009:C:T | - | 0.0777716682081475 | 0.0104567568076511 | BLCA | Male-baised eQTL |
| rs79956724 | chr5:42936078:C:A | - | 0.0777716682081475 | 0.0104567568076511 | BLCA | Male-baised eQTL |
| rs62360373 | chr5:37820639:G:A | - | 0.0933148473538275 | 0.0142660823825799 | BLCA | Male-baised eQTL |
| rs62360371 | chr5:37816932:C:T | - | 0.0931206435061177 | 0.0147075652871509 | BLCA | Male-baised eQTL |
| rs2603624 | chr5:42911303:T:G | - | 0.0551690715704992 | 0.0159829372171188 | BLCA | Male-baised eQTL |
| rs16903732 | chr5:37811999:G:A | - | 0.091473678006858 | 0.0169347092894264 | BLCA | Male-baised eQTL |
| rs62360369 | chr5:37812047:G:C | - | 0.091473678006858 | 0.0169347092894264 | BLCA | Male-baised eQTL |
| rs11747340 | chr5:37840346:G:A | - | 0.098522121167402 | 0.0194014966323052 | BLCA | Male-baised eQTL |
| rs62360376 | chr5:37854586:A:T | - | 0.098522121167402 | 0.0194014966323052 | BLCA | Male-baised eQTL |
| rs75220215 | chr5:37860836:G:T | - | 0.0982612297113974 | 0.0200792792561004 | BLCA | Male-baised eQTL |
| rs62360378 | chr5:37860899:G:C | - | 0.0982612297113974 | 0.0200792792561004 | BLCA | Male-baised eQTL |
| rs2253157 | chr5:42906470:A:C | - | 0.0548407009570263 | 0.0227433150852177 | BLCA | Male-baised eQTL |
| rs2603622 | chr5:42912329:A:G | - | 0.0550353402875539 | 0.0244276182930175 | BLCA | Male-baised eQTL |
| rs421514 | chr5:42872367:T:G | - | 0.0561059142330659 | 0.0278973855432502 | BLCA | Male-baised eQTL |
| rs2548364 | chr5:42918380:T:C | - | 0.0575621987699991 | 0.0279521761112175 | BLCA | Male-baised eQTL |
| rs378235 | chr5:42867900:T:A | - | 0.0556885711391431 | 0.0302459283943785 | BLCA | Male-baised eQTL |
| rs388214 | chr5:42872369:G:A | - | 0.0556885711391431 | 0.0302459283943785 | BLCA | Male-baised eQTL |
| rs315253 | chr5:42874399:A:G | - | 0.0556885711391431 | 0.0302459283943785 | BLCA | Male-baised eQTL |
| rs309932 | chr5:42875352:C:T | - | 0.0556885711391431 | 0.0302459283943785 | BLCA | Male-baised eQTL |
| rs114353553 | chr5:42859705:A:T | - | 0.0557122428201223 | 0.0307263442270741 | BLCA | Male-baised eQTL |
| rs7701142 | chr5:42860108:T:C | - | 0.0557122428201223 | 0.0307263442270741 | BLCA | Male-baised eQTL |
| rs315261 | chr5:42887992:A:G | - | 0.105180482912611 | 0.0316378454965365 | BLCA | Male-baised eQTL |
| rs9885101 | chr5:42913209:C:A | - | 0.053209712793204 | 0.0317522178393608 | BLCA | Male-baised eQTL |
| rs78899997 | chr5:37833581:G:A | - | 0.0932878058957399 | 0.0329141733678173 | BLCA | Male-baised eQTL |
| rs315246 | chr5:42884125:A:G | - | 0.0554812635372393 | 0.0355854002533155 | BLCA | Male-baised eQTL |
| rs56000387 | chr5:37831431:T:C | - | 0.0916594681539936 | 0.0361708293525875 | BLCA | Male-baised eQTL |
| rs17386472 | chr5:37832696:C:T | - | 0.0916594681539936 | 0.0361708293525875 | BLCA | Male-baised eQTL |
| rs13156119 | chr5:42911361:A:C | - | 0.0520612386268079 | 0.0398748284751468 | BLCA | Male-baised eQTL |
| rs10044301 | chr5:42908236:C:A | - | 0.0520074595335098 | 0.0399233852020329 | BLCA | Male-baised eQTL |
| rs4513706 | chr5:42909188:G:C | - | 0.0517519174172076 | 0.0415596943593046 | BLCA | Male-baised eQTL |
| rs12659760 | chr5:42909923:C:T | - | 0.0517519174172076 | 0.0415596943593046 | BLCA | Male-baised eQTL |
| rs12655096 | chr5:42907283:T:C | - | 0.0546311181906933 | 0.0441609768767915 | BLCA | Male-baised eQTL |
| rs75236196 | chr5:40488557:T:C | - | 0.0965812825930301 | 0.000220106989565323 | LUAD | Male-baised eQTL |
| rs77091262 | chr5:40494051:G:A | - | 0.0965812825930301 | 0.000220106989565323 | LUAD | Male-baised eQTL |
| rs78870278 | chr5:40498079:C:T | - | 0.0976843625310736 | 0.00022084930768166 | LUAD | Male-baised eQTL |
| rs149137776 | chr5:40498229:G:A | - | 0.0976843625310736 | 0.00022084930768166 | LUAD | Male-baised eQTL |
| rs113700968 | chr5:40549520:G:A | - | 0.089817349629985 | 0.000609286017005282 | LUAD | Male-baised eQTL |
| rs10512738 | chr5:40428699:A:G | - | 0.0794924940662348 | 0.0196173557826521 | LUAD | Male-baised eQTL |
| rs73750647 | chr5:38251076:T:C | - | 0.0878357933568888 | 0.0382874094602916 | LUAD | Male-baised eQTL |
| rs73750649 | chr5:38252643:A:C | - | 0.0878357933568888 | 0.0382874094602916 | LUAD | Male-baised eQTL |
| rs73750645 | chr5:38248397:A:T | - | 0.0847341439369988 | 0.0470376506509053 | LUAD | Male-baised eQTL |
| rs73750646 | chr5:38248982:G:C | - | 0.0847341439369988 | 0.0470376506509053 | LUAD | Male-baised eQTL |
Opposite sex-biased eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Sex-biased Gene in Cancer | Cancer Type |
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Sex-biased eQTM regulation of gene |
Sex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table). |
Male-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
| cg03326188 | chr5:43412363 | gene,exon,promoter,UTR | -0.412868107714997 | 3.49559115404865e-15 | -0.5475191237348821 | 7.6740145595780485e-19 | LUAD |
| cg03326188 | chr5:43412363 | gene,exon,promoter,UTR | -0.0834311502207436 | 5.48309621201451e-05 | -0.31398675312599816 | 3.413249730589733e-07 | LIHC |
Female-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
Opposite sex-biased eQTM regulation. |
| CpG Site | CpG Postion | CpG Island | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Male Cor | Male P-value | Female Cor | Female P-value | Sex-biased Coding Gene | Cancer Type |
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Sex-biased sQTL regulation of gene |
Sex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTL | Description |
Male-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
Female-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
Opposite sex-biased sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Male Effect | Male FDR | Female Effect | Female FDR | Cancer Type |
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Sex-biased sQTM regulation of gene |
Sex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTM | Description |
Male-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
Female-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
Opposite sex-biased sQTM regulation. |
| EX ID | EX Info | Skipped Exon | CPG Site | CPG Position | CPG Island | Position to EX Events | Male Effect | Male FDR | Female Effect | Female FDR | Male Correlation | Male P-value | Female Correlation | Female P-value | ORF_anno | Cancer Type |
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Related disease information of CCL28 |
Diseases associated with this gene (DisGeNET). |
| Gene ID | Gene Symbol | Disease ID | Disease Name | Number of PMID | Source |