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Gene: ENSG00000149639 |
Summary for SOGA1 |
Gene summary |
| Gene information | Ensembl ID | ENSG00000149639 | Gene symbol | SOGA1 |
| Gene name | suppressor of glucose, autophagy associated 1 | |
| HGNC | 16111 | |
| Entrez ID | 140710 | |
| Gene type | protein_coding | |
| Synonyms | SOGA1|dJ132F21.1|FLJ44670|SOGA | |
| UniProtAcc | O94964 |
Drugs associated with this gene(DrugBank). |
| Gene ID | Gene Symbol | Drug ID | Drug Name | Drug Type |
Cancer therapeutic drugs associated with this gene(NCI). |
| Gene ID | Gene Name | Drug ID | Drug Name | Drug Type | Cancer |
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Structure and expression level for SOGA1 |
AS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.∗For more information on exon skipping events please check the ExonskipDB database. ∗For more information on exon skipping events please check the CAeditome database. |
Landscape of gene expressions across multiple cancer types. |
Differentially expressed gene analysis between tumor male and tumor female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
Differentially expressed gene analysis between tumor male and normal male samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| SOGA1 | 2.85e+03 | -1.09e+00 | 2.32e-01 | -4.70e+00 | 2.61e-06 | 1.83e-05 | BLCA |
| SOGA1 | 2.46e+03 | -1.12e+00 | 3.30e-01 | -3.40e+00 | 6.66e-04 | 1.80e-03 | KICH |
| SOGA1 | 1.42e+03 | 2.15e+00 | 2.28e-01 | 9.41e+00 | 4.77e-21 | 5.90e-19 | CHOL |
Differentially expressed gene analysis between tumor female and normal female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
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Sex-biased somatic mutation for SOGA1 |
| ∗For more information on exon skipping events please check the ExonskipDB database. |
| Gene ID | Cancer Type | Hugo Symbol | Male | Female | pval | or | ci.up | ci.low | adjPval |
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DNA methylation with beta values for SOGA1 |
Landscape of DNA methylation across multiple cancer types. |
Differentially expressed CpG sites between male tumor and female tumor patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| BRCA | cg06477069 | chr20:36864975 | CGI:chr20:36862598-36864402 | promoter | 3.57e-01 | 2.50e-01 | 2.63e+00 | 8.58e-03 | 2.52e-02 | 1.07e-01 |
| ACC | cg16144843 | chr20:36864318 | CGI:chr20:36862598-36864402 | promoter | 2.10e-01 | 3.17e-01 | -2.29e+00 | 2.21e-02 | 3.69e-02 | -1.08e-01 |
Differentially expressed CpG sites between male tumor and male normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| LUSC | cg01844321 | chr20:36862412 | CGI:chr20:36862598-36864402 | promoter,gene body | 3.11e-01 | 4.16e-01 | -2.92e+00 | 3.55e-03 | 6.33e-03 | -1.05e-01 |
| KIRP | cg06477069 | chr20:36864975 | CGI:chr20:36862598-36864402 | promoter | 4.42e-01 | 6.09e-01 | -3.19e+00 | 1.43e-03 | 2.47e-03 | -1.67e-01 |
| CHOL | cg01844321 | chr20:36862412 | CGI:chr20:36862598-36864402 | promoter,gene body | 2.71e-01 | 4.12e-01 | -1.99e+00 | 4.65e-02 | 4.65e-02 | -1.41e-01 |
Differentially expressed CpG sites between female tumor and female normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| HNSC | cg01844321 | chr20:36862412 | CGI:chr20:36862598-36864402 | promoter,gene body | 3.36e-01 | 2.22e-01 | 2.41e+00 | 1.60e-02 | 2.42e-02 | 1.14e-01 |
| HNSC | cg06477069 | chr20:36864975 | CGI:chr20:36862598-36864402 | promoter | 4.39e-01 | 3.20e-01 | 2.31e+00 | 2.10e-02 | 2.84e-02 | 1.18e-01 |
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Exon skipping events with PSI in TCGA for SOGA1 |
| ∗Please access ExonSkipDB for exon skipping annotation. |
Landscape of exon skipping events across multiple cancer types. |
Differentially expressed exon skipping events between male tumor and female tumor patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
Differentially expressed exon skipping events between male tumor and male normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
Differentially expressed exon skipping events between female tumor and female normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
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RNA A-to-I editing events in TCGA for SOGA1 |
| ∗Please access CAeditome for RNA editing annotation. |
Landscape of RNA editing events across multiple cancer types. |
Differentially expressed RNA editing events between male tumor and female tumor patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| BRCA | SOGA1-003 | chr20_36781414_- | 6.34e-01 | 5.13e-01 | 2.33e+00 | 2.00e-02 | 4.97e-02 | 1.21e-01 |
| LUAD | SOGA1-003 | chr20_36781484_- | 2.30e-01 | 2.67e-01 | -2.58e+00 | 9.80e-03 | 2.85e-02 | -3.65e-02 |
| LGG | SOGA1-003 | chr20_36782014_- | 1.73e-01 | 1.38e-01 | 2.15e+00 | 3.17e-02 | 4.76e-02 | 3.58e-02 |
| THCA | SOGA1-003 | chr20_36781454_- | 2.14e-01 | 1.78e-01 | 1.97e+00 | 4.86e-02 | 4.95e-02 | 3.60e-02 |
| HNSC | SOGA1-003 | chr20_36781454_- | 1.80e-01 | 2.19e-01 | -2.55e+00 | 1.07e-02 | 3.64e-02 | -3.90e-02 |
| HNSC | SOGA1-003 | chr20_36781534_- | 1.74e-01 | 2.14e-01 | -2.20e+00 | 2.77e-02 | 4.41e-02 | -4.03e-02 |
| LUSC | SOGA1-003 | chr20_36781953_- | 1.42e-01 | 1.99e-01 | -2.33e+00 | 1.96e-02 | 4.91e-02 | -5.70e-02 |
| LUSC | SOGA1-003 | chr20_36782780_- | 1.43e-01 | 1.81e-01 | -2.41e+00 | 1.59e-02 | 4.91e-02 | -3.82e-02 |
| SKCM | SOGA1-003 | chr20_36781288_- | 2.07e-01 | 2.47e-01 | -1.97e+00 | 4.85e-02 | 4.93e-02 | -4.04e-02 |
| SKCM | SOGA1-003 | chr20_36781291_- | 1.80e-01 | 2.16e-01 | -2.14e+00 | 3.22e-02 | 4.90e-02 | -3.60e-02 |
| SKCM | SOGA1-003 | chr20_36781484_- | 1.96e-01 | 2.16e-01 | -2.21e+00 | 2.70e-02 | 4.90e-02 | -1.98e-02 |
| SKCM | SOGA1-003 | chr20_36783501_- | 1.83e-01 | 2.25e-01 | -2.47e+00 | 1.34e-02 | 4.90e-02 | -4.14e-02 |
| BLCA | SOGA1-003 | chr20_36781370_- | 7.20e-01 | 8.29e-01 | -2.26e+00 | 2.40e-02 | 4.98e-02 | -1.09e-01 |
| BLCA | SOGA1-003 | chr20_36783501_- | 2.59e-01 | 2.17e-01 | 2.08e+00 | 3.78e-02 | 4.98e-02 | 4.21e-02 |
| STAD | SOGA1-003 | chr20_36781949_- | 1.81e-01 | 2.30e-01 | -2.48e+00 | 1.32e-02 | 4.96e-02 | -4.85e-02 |
| KIRP | SOGA1-003 | chr20_36782112_- | 4.22e-01 | 3.50e-01 | 2.08e+00 | 3.74e-02 | 4.80e-02 | 7.19e-02 |
| SARC | SOGA1-003 | chr20_36781414_- | 6.81e-01 | 6.07e-01 | 2.70e+00 | 6.97e-03 | 4.85e-02 | 7.48e-02 |
| SARC | SOGA1-003 | chr20_36782031_- | 2.17e-01 | 1.80e-01 | 1.96e+00 | 4.96e-02 | 4.97e-02 | 3.73e-02 |
| SARC | SOGA1-003 | chr20_36782105_- | 1.32e-01 | 2.01e-01 | -2.14e+00 | 3.25e-02 | 4.95e-02 | -6.88e-02 |
| PCPG | SOGA1-003 | chr20_36781450_- | 2.57e-01 | 3.39e-01 | -2.35e+00 | 1.86e-02 | 4.98e-02 | -8.14e-02 |
| READ | SOGA1-003 | chr20_36781373_- | 7.67e-01 | 5.15e-01 | 2.54e+00 | 1.12e-02 | 4.67e-02 | 2.52e-01 |
| GBM | SOGA1-003 | chr20_36781306_- | 2.19e-01 | 2.62e-01 | -2.05e+00 | 4.04e-02 | 4.96e-02 | -4.28e-02 |
| GBM | SOGA1-003 | chr20_36783501_- | 1.45e-01 | 2.30e-01 | -2.13e+00 | 3.32e-02 | 4.96e-02 | -8.47e-02 |
| ESCA | SOGA1-003 | chr20_36781370_- | 7.40e-01 | 6.77e-01 | 2.36e+00 | 1.84e-02 | 4.99e-02 | 6.36e-02 |
| ESCA | SOGA1-003 | chr20_36781373_- | 6.71e-01 | 5.85e-01 | 2.23e+00 | 2.57e-02 | 4.99e-02 | 8.65e-02 |
| THYM | SOGA1-003 | chr20_36781288_- | 1.94e-01 | 3.00e-01 | -2.00e+00 | 4.60e-02 | 4.88e-02 | -1.06e-01 |
| THYM | SOGA1-003 | chr20_36783501_- | 1.52e-01 | 2.62e-01 | -2.01e+00 | 4.46e-02 | 4.87e-02 | -1.11e-01 |
Differentially expressed RNA editing events between male tumor and male normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| KIRC | SOGA1-003 | chr20_36781288_- | 2.39e-01 | 1.77e-01 | 2.88e+00 | 4.04e-03 | 9.81e-03 | 6.18e-02 |
| KIRC | SOGA1-003 | chr20_36781373_- | 6.37e-01 | 7.28e-01 | -2.77e+00 | 5.52e-03 | 1.22e-02 | -9.10e-02 |
| KIRC | SOGA1-003 | chr20_36781414_- | 4.68e-01 | 5.30e-01 | -2.51e+00 | 1.22e-02 | 2.04e-02 | -6.22e-02 |
| KIRC | SOGA1-003 | chr20_36783501_- | 2.15e-01 | 1.60e-01 | 2.52e+00 | 1.16e-02 | 1.97e-02 | 5.48e-02 |
| THCA | SOGA1-003 | chr20_36781682_- | 2.12e-01 | 1.35e-01 | 2.75e+00 | 5.96e-03 | 1.37e-02 | 7.75e-02 |
| HNSC | SOGA1-003 | chr20_36781373_- | 6.97e-01 | 5.96e-01 | 2.06e+00 | 3.94e-02 | 4.13e-02 | 1.01e-01 |
| HNSC | SOGA1-003 | chr20_36781423_- | 2.93e-01 | 1.88e-01 | 2.54e+00 | 1.10e-02 | 1.52e-02 | 1.05e-01 |
| HNSC | SOGA1-003 | chr20_36782112_- | 4.74e-01 | 3.26e-01 | 3.47e+00 | 5.21e-04 | 1.31e-03 | 1.48e-01 |
| LUSC | SOGA1-003 | chr20_36781288_- | 2.23e-01 | 3.41e-01 | -3.20e+00 | 1.38e-03 | 5.91e-03 | -1.18e-01 |
| LUSC | SOGA1-003 | chr20_36781370_- | 8.05e-01 | 6.73e-01 | 2.34e+00 | 1.94e-02 | 2.87e-02 | 1.32e-01 |
| LUSC | SOGA1-003 | chr20_36781414_- | 5.32e-01 | 4.12e-01 | 2.50e+00 | 1.26e-02 | 2.24e-02 | 1.20e-01 |
| LUSC | SOGA1-003 | chr20_36781484_- | 1.89e-01 | 2.62e-01 | -4.14e+00 | 3.44e-05 | 5.16e-04 | -7.22e-02 |
| LUSC | SOGA1-003 | chr20_36781966_- | 3.04e-01 | 2.05e-01 | 2.54e+00 | 1.09e-02 | 2.04e-02 | 9.91e-02 |
| LUSC | SOGA1-003 | chr20_36782031_- | 1.55e-01 | 2.41e-01 | -2.65e+00 | 8.15e-03 | 1.72e-02 | -8.58e-02 |
| LUSC | SOGA1-003 | chr20_36782097_- | 2.09e-01 | 2.72e-01 | -2.57e+00 | 1.01e-02 | 1.95e-02 | -6.29e-02 |
| LUSC | SOGA1-003 | chr20_36782112_- | 4.83e-01 | 4.11e-01 | 1.98e+00 | 4.74e-02 | 4.82e-02 | 7.15e-02 |
| COAD | SOGA1-003 | chr20_36781484_- | 2.28e-01 | 3.07e-01 | -2.04e+00 | 4.09e-02 | 4.33e-02 | -7.96e-02 |
| BLCA | SOGA1-003 | chr20_36781484_- | 2.27e-01 | 3.92e-01 | -2.97e+00 | 3.00e-03 | 1.52e-02 | -1.65e-01 |
| BLCA | SOGA1-003 | chr20_36782112_- | 4.63e-01 | 2.73e-01 | 2.83e+00 | 4.63e-03 | 1.83e-02 | 1.90e-01 |
| STAD | SOGA1-003 | chr20_36781484_- | 2.79e-01 | 4.10e-01 | -2.10e+00 | 3.54e-02 | 4.29e-02 | -1.31e-01 |
| STAD | SOGA1-003 | chr20_36782112_- | 5.94e-01 | 4.18e-01 | 2.73e+00 | 6.35e-03 | 1.90e-02 | 1.76e-01 |
| KIRP | SOGA1-003 | chr20_36781373_- | 6.73e-01 | 7.68e-01 | -1.97e+00 | 4.87e-02 | 4.95e-02 | -9.52e-02 |
Differentially expressed RNA editing events between female tumor and female normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| BRCA | SOGA1-003 | chr20_36781288_- | 2.38e-01 | 1.73e-01 | 4.33e+00 | 1.47e-05 | 4.42e-05 | 6.45e-02 |
| BRCA | SOGA1-003 | chr20_36781306_- | 2.38e-01 | 1.95e-01 | 2.49e+00 | 1.29e-02 | 1.72e-02 | 4.35e-02 |
| BRCA | SOGA1-003 | chr20_36781370_- | 7.94e-01 | 7.39e-01 | 4.16e+00 | 3.15e-05 | 8.78e-05 | 5.55e-02 |
| BRCA | SOGA1-003 | chr20_36781373_- | 7.03e-01 | 6.43e-01 | 4.03e+00 | 5.59e-05 | 1.48e-04 | 6.04e-02 |
| BRCA | SOGA1-003 | chr20_36781414_- | 5.13e-01 | 4.26e-01 | 5.15e+00 | 2.60e-07 | 1.08e-06 | 8.72e-02 |
| BRCA | SOGA1-003 | chr20_36781423_- | 3.15e-01 | 2.67e-01 | 3.22e+00 | 1.28e-03 | 2.41e-03 | 4.76e-02 |
| BRCA | SOGA1-003 | chr20_36781450_- | 2.82e-01 | 2.23e-01 | 4.66e+00 | 3.12e-06 | 1.07e-05 | 5.88e-02 |
| BRCA | SOGA1-003 | chr20_36781453_- | 2.57e-01 | 1.84e-01 | 5.13e+00 | 2.87e-07 | 1.18e-06 | 7.34e-02 |
| BRCA | SOGA1-003 | chr20_36781454_- | 2.02e-01 | 1.57e-01 | 2.58e+00 | 9.92e-03 | 1.39e-02 | 4.46e-02 |
| BRCA | SOGA1-003 | chr20_36781534_- | 2.04e-01 | 1.73e-01 | 2.38e+00 | 1.73e-02 | 2.19e-02 | 3.07e-02 |
| BRCA | SOGA1-003 | chr20_36781682_- | 2.34e-01 | 1.60e-01 | 5.84e+00 | 5.07e-09 | 2.82e-08 | 7.40e-02 |
| BRCA | SOGA1-003 | chr20_36781966_- | 3.41e-01 | 3.05e-01 | 2.45e+00 | 1.43e-02 | 1.87e-02 | 3.69e-02 |
| BRCA | SOGA1-003 | chr20_36782013_- | 1.68e-01 | 2.57e-01 | -2.19e+00 | 2.85e-02 | 3.23e-02 | -8.87e-02 |
| BRCA | SOGA1-003 | chr20_36782097_- | 2.26e-01 | 1.53e-01 | 2.86e+00 | 4.24e-03 | 6.79e-03 | 7.29e-02 |
| BRCA | SOGA1-003 | chr20_36782112_- | 5.65e-01 | 4.01e-01 | 9.30e+00 | 1.36e-20 | 3.60e-19 | 1.64e-01 |
| BRCA | SOGA1-003 | chr20_36783501_- | 2.48e-01 | 1.81e-01 | 1.96e+00 | 4.99e-02 | 4.99e-02 | 6.63e-02 |
| KIRC | SOGA1-003 | chr20_36781484_- | 2.47e-01 | 1.89e-01 | 2.92e+00 | 3.54e-03 | 1.53e-02 | 5.72e-02 |
| THCA | SOGA1-003 | chr20_36781288_- | 2.01e-01 | 1.44e-01 | 2.41e+00 | 1.61e-02 | 2.32e-02 | 5.70e-02 |
| THCA | SOGA1-003 | chr20_36781370_- | 7.59e-01 | 7.20e-01 | 1.98e+00 | 4.71e-02 | 4.81e-02 | 3.83e-02 |
| THCA | SOGA1-003 | chr20_36781373_- | 6.99e-01 | 6.51e-01 | 2.33e+00 | 1.99e-02 | 2.69e-02 | 4.81e-02 |
| THCA | SOGA1-003 | chr20_36781534_- | 2.11e-01 | 1.40e-01 | 3.95e+00 | 7.66e-05 | 5.25e-04 | 7.12e-02 |
| THCA | SOGA1-003 | chr20_36781966_- | 2.70e-01 | 2.22e-01 | 2.32e+00 | 2.02e-02 | 2.72e-02 | 4.87e-02 |
| HNSC | SOGA1-003 | chr20_36781453_- | 2.39e-01 | 1.65e-01 | 2.25e+00 | 2.41e-02 | 3.03e-02 | 7.38e-02 |
| KICH | SOGA1-003 | chr20_36781484_- | 1.57e-01 | 2.60e-01 | -2.76e+00 | 5.77e-03 | 1.25e-02 | -1.03e-01 |
Protein coding RNA editing(s). |
| Editing Position | Variant Type | Gene Symbol | Transcript ID | NTchange | AAchange |
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Sex-biased TF-Gene network for SOGA1 |
TFs related to SOGA1.∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
| Cancer Type | TF | Target Gene | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| BRCA | ZNF235 | SOGA1 | 4.30e+00 | 9.90e-01 | 1.89e+00 | 2.52e-04 | Male-biased |
| BRCA | ZNF287 | SOGA1 | 4.21e+00 | 9.88e-01 | 1.99e+00 | 4.83e-04 | Male-biased |
| LAML | PLAGL2 | SOGA1 | 2.81e+00 | 1.06e-03 | 4.27e+00 | 9.87e-01 | Female-biased |
SOGA1 related gene.∗Only the gene encode TF might with this result. ∗For more information please check Sex-biased TF-Coding gene network. |
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Sex-biased RBP-ES network for SOGA1 |
RBPs related to ES in SOGA1.∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
| Cancer Type | RBP | Target ES | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
SOGA1 related ES.∗Only the gene encode RBP might with this result. ∗For more information please check Sex-biased RBP-ES network in cancer. |
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Sex-biased CeRNA regulation of gene |
Sex-biased CeRNA regulation of gene. |
| Gene ID | ceRNA(lncRNA-miRNA-mRNA) | Group | Cancer Type |
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Sex-biased eQTL regulation of gene |
Sex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| eQTL | Description |
Male-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs2424918 | chr20:32794964:C:T | - | -0.0990018770559025 | 0.039086370457437 | HNSC | Female-baised eQTL |
| rs910085 | chr20:32795547:T:G | - | -0.0990018770559025 | 0.039086370457437 | HNSC | Female-baised eQTL |
| rs58203547 | chr20:30376259:A:G | - | 0.193458522873149 | 0.010608294552469 | BLCA | Female-baised eQTL |
| rs6015420 | chr20:38581919:G:T | - | 0.135258149381829 | 0.0177722451270387 | BLCA | Female-baised eQTL |
| rs11906476 | chr20:36443138:A:G | - | -0.118773404894915 | 0.0242044034286254 | BLCA | Female-baised eQTL |
| rs111863048 | chr20:30327501:C:T | - | 0.239415254161548 | 0.0247863571495201 | BLCA | Female-baised eQTL |
| rs6119001 | chr20:30304880:G:T | - | 0.177745539823643 | 0.0250569605805162 | BLCA | Female-baised eQTL |
| rs375288890 | chr20:30346678:G:T | - | 0.234905088989976 | 0.0320789137655001 | BLCA | Female-baised eQTL |
| rs60897953 | chr20:30329969:C:T | - | 0.192758156774064 | 0.0383784442269983 | BLCA | Female-baised eQTL |
| rs6119126 | chr20:30407048:G:C | - | 0.189334381695165 | 0.0387397092856163 | BLCA | Female-baised eQTL |
| rs1292938 | chr20:38569058:A:C | - | 0.111731788289453 | 0.0388524083889067 | BLCA | Female-baised eQTL |
| rs11907419 | chr20:30340604:G:A | - | 0.166481965970951 | 0.040555568139562 | BLCA | Female-baised eQTL |
| rs6119082 | chr20:30371759:C:T | - | 0.166481965970951 | 0.040555568139562 | BLCA | Female-baised eQTL |
| rs6119036 | chr20:30331703:T:C | - | 0.165156914462157 | 0.0443623227437665 | BLCA | Female-baised eQTL |
| rs6119037 | chr20:30332269:C:G | - | 0.165156914462157 | 0.0443623227437665 | BLCA | Female-baised eQTL |
| rs6119038 | chr20:30333450:C:T | - | 0.165156914462157 | 0.0443623227437665 | BLCA | Female-baised eQTL |
| rs112624490 | chr20:30343505:C:T | - | 0.165156914462157 | 0.0443623227437665 | BLCA | Female-baised eQTL |
| rs6119053 | chr20:30343944:C:T | - | 0.165156914462157 | 0.0443623227437665 | BLCA | Female-baised eQTL |
| rs11908385 | chr20:30350104:A:G | - | 0.165156914462157 | 0.0443623227437665 | BLCA | Female-baised eQTL |
| rs6118896 | chr20:30350757:A:G | - | 0.165156914462157 | 0.0443623227437665 | BLCA | Female-baised eQTL |
| rs6119063 | chr20:30353898:T:G | - | 0.165156914462157 | 0.0443623227437665 | BLCA | Female-baised eQTL |
| rs6118901 | chr20:30357155:A:T | - | 0.165156914462157 | 0.0443623227437665 | BLCA | Female-baised eQTL |
| rs6119070 | chr20:30357912:G:A | - | 0.165156914462157 | 0.0443623227437665 | BLCA | Female-baised eQTL |
| rs6119071 | chr20:30359747:T:A | - | 0.165156914462157 | 0.0443623227437665 | BLCA | Female-baised eQTL |
| rs1955266 | chr20:30359805:G:A | - | 0.165156914462157 | 0.0443623227437665 | BLCA | Female-baised eQTL |
| rs6118903 | chr20:30363975:C:T | - | 0.165156914462157 | 0.0443623227437665 | BLCA | Female-baised eQTL |
| rs4337546 | chr20:30377177:G:A | - | 0.165156914462157 | 0.0443623227437665 | BLCA | Female-baised eQTL |
| rs6119007 | chr20:30307482:T:A | - | 0.164318520967344 | 0.047450245213656 | BLCA | Female-baised eQTL |
| rs6118876 | chr20:30307727:T:C | - | 0.164318520967344 | 0.047450245213656 | BLCA | Female-baised eQTL |
| rs6119008 | chr20:30307800:T:A | - | 0.164318520967344 | 0.047450245213656 | BLCA | Female-baised eQTL |
| rs6119013 | chr20:30308652:T:C | - | 0.164318520967344 | 0.047450245213656 | BLCA | Female-baised eQTL |
| rs6118877 | chr20:30308653:G:A | - | 0.164318520967344 | 0.047450245213656 | BLCA | Female-baised eQTL |
| rs7264111 | chr20:30309083:T:C | - | 0.164318520967344 | 0.047450245213656 | BLCA | Female-baised eQTL |
| rs7274062 | chr20:30309135:C:T | - | 0.164318520967344 | 0.047450245213656 | BLCA | Female-baised eQTL |
| rs6118879 | chr20:30309505:G:T | - | 0.164318520967344 | 0.047450245213656 | BLCA | Female-baised eQTL |
| rs6119014 | chr20:30309535:G:C | - | 0.164318520967344 | 0.047450245213656 | BLCA | Female-baised eQTL |
| rs6119018 | chr20:30313448:A:G | - | 0.164318520967344 | 0.047450245213656 | BLCA | Female-baised eQTL |
| rs12481195 | chr20:30316128:G:A | - | 0.164318520967344 | 0.047450245213656 | BLCA | Female-baised eQTL |
| rs146471460 | chr20:30316230:G:A | - | 0.164318520967344 | 0.047450245213656 | BLCA | Female-baised eQTL |
| rs376429732 | chr20:30317982:C:A | - | 0.164318520967344 | 0.047450245213656 | BLCA | Female-baised eQTL |
| rs181166610 | chr20:30317983:A:G | - | 0.164318520967344 | 0.047450245213656 | BLCA | Female-baised eQTL |
Female-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs3092217 | chr20:41751429:C:T | - | -0.0603806594737531 | 0.0472139969459249 | LIHC | Male-baised eQTL |
| rs6031593 | chr20:44422573:T:C | - | 0.0517271779298816 | 0.0289071650932034 | BLCA | Male-baised eQTL |
| rs149437376 | chr20:39287135:A:G | - | -0.0900442847128299 | 0.0386545673906809 | COAD | Male-baised eQTL |
| rs6101477 | chr20:39352861:C:T | - | -0.0646390781293208 | 0.0464987335904305 | COAD | Male-baised eQTL |
Opposite sex-biased eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Sex-biased Gene in Cancer | Cancer Type |
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Sex-biased eQTM regulation of gene |
Sex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table). |
Male-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
| cg01599925 | chr20:36859621 | gene,exon,UTR | -0.444024883625523 | 1.53651684401501e-08 | -0.5416974975247684 | 6.849095054794223e-12 | THCA |
| cg09589443 | chr20:36860818 | gene | -0.444024883625523 | 1.53651684401501e-08 | -0.5416974975247684 | 6.849095054794223e-12 | THCA |
Female-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
| cg01844321 | chr20:36862412 | gene,promoter | -0.10790603940176 | 3.24526339288204e-05 | -0.33164939018665196 | 5.8184545868879666e-08 | LUAD |
Opposite sex-biased eQTM regulation. |
| CpG Site | CpG Postion | CpG Island | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Male Cor | Male P-value | Female Cor | Female P-value | Sex-biased Coding Gene | Cancer Type |
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Sex-biased sQTL regulation of gene |
Sex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTL | Description |
Male-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
Female-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
Opposite sex-biased sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Male Effect | Male FDR | Female Effect | Female FDR | Cancer Type |
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Sex-biased sQTM regulation of gene |
Sex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTM | Description |
Male-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
Female-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
Opposite sex-biased sQTM regulation. |
| EX ID | EX Info | Skipped Exon | CPG Site | CPG Position | CPG Island | Position to EX Events | Male Effect | Male FDR | Female Effect | Female FDR | Male Correlation | Male P-value | Female Correlation | Female P-value | ORF_anno | Cancer Type |
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Related disease information of SOGA1 |
Diseases associated with this gene (DisGeNET). |
| Gene ID | Gene Symbol | Disease ID | Disease Name | Number of PMID | Source |