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Gene: ENSG00000144724 |
Summary for PTPRG |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000144724 | Gene symbol | PTPRG |
| Gene name | protein tyrosine phosphatase receptor type G | |
| HGNC | 9671 | |
| Entrez ID | 5793 | |
| Gene type | protein_coding | |
| Synonyms | PTPRG|RPTPG | |
| UniProtAcc | P23470 |
| Drugs associated with this gene(DrugBank). |
| Gene ID | Gene Symbol | Drug ID | Drug Name | Drug Type |
| Cancer therapeutic drugs associated with this gene(NCI). |
| Gene ID | Gene Name | Drug ID | Drug Name | Drug Type | Cancer |
Top |
Structure and expression level for PTPRG |
| AS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure. ∗For more information on exon skipping events please check the ExonskipDB database. ∗For more information on exon skipping events please check the CAeditome database. |
 |
| Landscape of gene expressions across multiple cancer types. |
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| Differentially expressed gene analysis between tumor male and tumor female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| Differentially expressed gene analysis between tumor male and normal male samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| Differentially expressed gene analysis between tumor female and normal female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
Top |
Sex-biased somatic mutation for PTPRG |
| ∗For more information on exon skipping events please check the ExonskipDB database. |
| Gene ID | Cancer Type | Hugo Symbol | Male | Female | pval | or | ci.up | ci.low | adjPval |
Top |
DNA methylation with beta values for PTPRG |
| Landscape of DNA methylation across multiple cancer types. |
 |
| Differentially expressed CpG sites between male tumor and female tumor patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| Differentially expressed CpG sites between male tumor and male normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| Differentially expressed CpG sites between female tumor and female normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
Top |
Exon skipping events with PSI in TCGA for PTPRG |
| ∗Please access ExonSkipDB for exon skipping annotation. |
| Landscape of exon skipping events across multiple cancer types. |
 |
| Differentially expressed exon skipping events between male tumor and female tumor patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
| Differentially expressed exon skipping events between male tumor and male normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
| Differentially expressed exon skipping events between female tumor and female normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
Top |
RNA A-to-I editing events in TCGA for PTPRG |
| ∗Please access CAeditome for RNA editing annotation. |
| Landscape of RNA editing events across multiple cancer types. |
 |
| Differentially expressed RNA editing events between male tumor and female tumor patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| LUAD | PTPRG-006 | chr3_61566566_+ | 1.63e-01 | 4.26e-01 | -2.20e+00 | 2.78e-02 | 4.18e-02 | -2.63e-01 |
| LUAD | PTPRG-006 | chr3_61569539_+ | 2.18e-01 | 2.95e-01 | -2.74e+00 | 6.17e-03 | 2.32e-02 | -7.70e-02 |
| LUAD | PTPRG-006 | chr3_61769300_+ | 4.33e-01 | 2.58e-01 | 3.00e+00 | 2.70e-03 | 1.98e-02 | 1.74e-01 |
| STAD | PTPRG-001 | chr3_61815289_+ | 3.94e-01 | 2.50e-01 | 3.14e+00 | 1.67e-03 | 4.96e-02 | 1.44e-01 |
| STAD | PTPRG-001 | chr3_61908047_+ | 2.99e-01 | 2.00e-01 | 2.27e+00 | 2.32e-02 | 4.96e-02 | 9.88e-02 |
| Differentially expressed RNA editing events between male tumor and male normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| Differentially expressed RNA editing events between female tumor and female normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| Protein coding RNA editing(s). |
| Editing Position | Variant Type | Gene Symbol | Transcript ID | NTchange | AAchange |
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Sex-biased TF-Gene network for PTPRG |
| TFs related to PTPRG. ∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
 |
| Cancer Type | TF | Target Gene | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| BLCA | HMX2 | PTPRG | 3.94e+00 | 1.43e-02 | 4.71e+00 | 9.80e-01 | Female-biased |
| BLCA | HNF1A | PTPRG | 3.50e+00 | 7.24e-03 | 4.43e+00 | 9.84e-01 | Female-biased |
| BLCA | POU3F2 | PTPRG | 2.77e+00 | 8.31e-04 | 4.25e+00 | 9.88e-01 | Female-biased |
| BLCA | POU4F1 | PTPRG | 3.34e+00 | 4.87e-03 | 4.36e+00 | 9.86e-01 | Female-biased |
| BLCA | POU4F2 | PTPRG | 3.41e+00 | 4.07e-03 | 4.48e+00 | 9.88e-01 | Female-biased |
| BLCA | SOX2 | PTPRG | 3.40e+00 | 5.16e-03 | 4.41e+00 | 9.86e-01 | Female-biased |
| BLCA | SOX21 | PTPRG | 3.60e+00 | 5.63e-03 | 4.59e+00 | 9.88e-01 | Female-biased |
| BLCA | SOX4 | PTPRG | 3.22e+00 | 5.32e-03 | 4.22e+00 | 9.83e-01 | Female-biased |
| BLCA | SOX7 | PTPRG | 3.28e+00 | 2.73e-03 | 4.45e+00 | 9.89e-01 | Female-biased |
| BLCA | SOX9 | PTPRG | 3.14e+00 | 3.97e-03 | 4.21e+00 | 9.84e-01 | Female-biased |
| BLCA | SRY | PTPRG | 3.89e+00 | 4.96e-03 | 4.92e+00 | 9.91e-01 | Female-biased |
| BLCA | TEAD1 | PTPRG | 3.45e+00 | 7.93e-03 | 4.35e+00 | 9.82e-01 | Female-biased |
| BLCA | ZFP82 | PTPRG | 3.08e+00 | 1.56e-03 | 4.39e+00 | 9.90e-01 | Female-biased |
| BLCA | ZNF334 | PTPRG | 3.01e+00 | 2.52e-04 | 4.82e+00 | 9.95e-01 | Female-biased |
| BLCA | ZNF79 | PTPRG | 2.93e+00 | 3.45e-04 | 4.66e+00 | 9.94e-01 | Female-biased |
| BLCA | ZNF879 | PTPRG | 2.39e+00 | 1.27e-04 | 4.37e+00 | 9.91e-01 | Female-biased |
| CHOL | POU4F1 | PTPRG | 3.50e+00 | 7.46e-03 | 4.51e+00 | 9.87e-01 | Female-biased |
| CHOL | POU4F2 | PTPRG | 3.57e+00 | 1.29e-02 | 4.43e+00 | 9.81e-01 | Female-biased |
| CHOL | SOX2 | PTPRG | 3.52e+00 | 1.08e-02 | 4.43e+00 | 9.83e-01 | Female-biased |
| CHOL | SRY | PTPRG | 4.08e+00 | 1.28e-02 | 4.95e+00 | 9.84e-01 | Female-biased |
| CHOL | ZFP82 | PTPRG | 3.31e+00 | 8.28e-03 | 4.28e+00 | 9.84e-01 | Female-biased |
| CHOL | ZNF334 | PTPRG | 3.36e+00 | 5.17e-03 | 4.46e+00 | 9.89e-01 | Female-biased |
| DLBC | ZNF235 | PTPRG | 2.63e+00 | 2.23e-03 | 3.93e+00 | 9.81e-01 | Female-biased |
| LAML | ZFP82 | PTPRG | 4.32e+00 | 9.81e-01 | 3.32e+00 | 7.01e-03 | Male-biased |
| LAML | ZNF334 | PTPRG | 4.59e+00 | 9.91e-01 | 3.11e+00 | 1.16e-03 | Male-biased |
| LAML | ZNF79 | PTPRG | 4.33e+00 | 9.87e-01 | 2.90e+00 | 1.35e-03 | Male-biased |
| SKCM | POU3F2 | PTPRG | 4.23e+00 | 1.30e-02 | 5.13e+00 | 9.81e-01 | Female-biased |
| SKCM | ZNF334 | PTPRG | 4.77e+00 | 5.36e-03 | 5.96e+00 | 9.93e-01 | Female-biased |
| SKCM | ZNF79 | PTPRG | 4.51e+00 | 5.56e-03 | 5.69e+00 | 9.92e-01 | Female-biased |
| SKCM | ZNF879 | PTPRG | 4.05e+00 | 5.29e-03 | 5.24e+00 | 9.90e-01 | Female-biased |
| PTPRG related gene. ∗Only the gene encode TF might with this result. ∗For more information please check Sex-biased TF-Coding gene network. |
Top |
Sex-biased RBP-ES network for PTPRG |
| RBPs related to ES in PTPRG. ∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
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| Cancer Type | RBP | Target ES | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| KICH | RBM6 | exon_skip_375720 | 6.74e+00 | 6.17e-03 | 7.11e+00 | 9.81e-01 | Female-biased |
| PTPRG related ES. ∗Only the gene encode RBP might with this result. ∗For more information please check Sex-biased RBP-ES network in cancer. |
Top |
Sex-biased CeRNA regulation of gene |
| Sex-biased CeRNA regulation of gene. |
| Gene ID | ceRNA(lncRNA-miRNA-mRNA) | Group | Cancer Type |
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Sex-biased eQTL regulation of gene |
| Sex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| eQTL | Description |
 | Gene ID: ENSG00000144724 |
| SNP ID: rs349170 | |
| Position to Gene: gene | |
| Male Effect: - | |
| Female Effect: 0.0895982618892791 | |
 | Gene ID: ENSG00000144724 |
| SNP ID: rs171184 | |
| Position to Gene: gene | |
| Male Effect: - | |
| Female Effect: 0.0895982618892791 |
| Male-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs11716580 | chr3:58242968:G:C | - | 0.218066558737098 | 0.00636155988141939 | BLCA | Female-baised eQTL |
| rs3733125 | chr3:63995959:C:T | - | 0.171358727494355 | 0.00801724326437995 | BLCA | Female-baised eQTL |
| rs6808903 | chr3:58263191:G:A | - | 0.214189418794565 | 0.00887843197303603 | BLCA | Female-baised eQTL |
| rs35557787 | chr3:58248809:T:C | - | 0.197405061919764 | 0.0104299327938255 | BLCA | Female-baised eQTL |
| rs35007301 | chr3:58244625:G:A | - | 0.200156050874836 | 0.0120465320124137 | BLCA | Female-baised eQTL |
| rs71311849 | chr3:58245082:G:A | - | 0.200156050874836 | 0.0120465320124137 | BLCA | Female-baised eQTL |
| rs9854714 | chr3:65170889:C:A | - | 0.137338916978178 | 0.0197691847551677 | BLCA | Female-baised eQTL |
| rs58422650 | chr3:65174086:T:A | - | 0.128193584479631 | 0.0222372470794998 | BLCA | Female-baised eQTL |
| rs59481254 | chr3:65174204:G:A | - | 0.128193584479631 | 0.0222372470794998 | BLCA | Female-baised eQTL |
| rs72889957 | chr3:65174478:C:G | - | 0.128193584479631 | 0.0222372470794998 | BLCA | Female-baised eQTL |
| rs72889958 | chr3:65174519:C:A | - | 0.128193584479631 | 0.0222372470794998 | BLCA | Female-baised eQTL |
| rs9879345 | chr3:58264391:A:G | - | 0.187770139525811 | 0.0225498017542942 | BLCA | Female-baised eQTL |
| rs9826120 | chr3:65177943:A:G | - | 0.125662753643503 | 0.0290354005359479 | BLCA | Female-baised eQTL |
| rs12186078 | chr3:54585788:A:G | - | 0.195813151053878 | 0.0346699573576797 | BLCA | Female-baised eQTL |
| rs9856064 | chr3:65172226:T:G | - | 0.123171776376839 | 0.0350481390383859 | BLCA | Female-baised eQTL |
| rs9860210 | chr3:65171809:G:A | - | 0.119442777467917 | 0.036837867915721 | BLCA | Female-baised eQTL |
| rs12715517 | chr3:57711308:G:A | - | 0.104868558489348 | 0.0461878469258261 | BLCA | Female-baised eQTL |
| rs9879789 | chr3:65173724:A:G | - | 0.117212589431076 | 0.0463395961990072 | BLCA | Female-baised eQTL |
| rs11925484 | chr3:64186193:G:A | - | 0.125709281078406 | 0.0481047006090989 | BLCA | Female-baised eQTL |
| rs4688550 | chr3:65243976:G:A | - | 0.108132239498139 | 3.73050364827089e-06 | LUAD | Female-baised eQTL |
| rs12495457 | chr3:65236261:A:G | - | 0.113493885202993 | 4.93771775518875e-06 | LUAD | Female-baised eQTL |
| rs999619 | chr3:65267294:T:A | - | 0.0879040271464885 | 4.0611871740819e-05 | LUAD | Female-baised eQTL |
| rs349170 | chr3:62066837:A:G | gene | 0.0895982618892791 | 6.14533956419672e-05 | LUAD | Female-baised eQTL |
| rs171184 | chr3:62067038:C:G | gene | 0.0895982618892791 | 6.14533956419672e-05 | LUAD | Female-baised eQTL |
| rs4688549 | chr3:65243923:G:T | - | 0.082362539910304 | 0.000188371656030788 | LUAD | Female-baised eQTL |
| rs11131010 | chr3:65244741:G:A | - | 0.0804269320432376 | 0.000243768668452993 | LUAD | Female-baised eQTL |
| rs12488399 | chr3:65230357:C:G | - | 0.088106824222877 | 0.00225914386626076 | LUAD | Female-baised eQTL |
| rs12632158 | chr3:65266797:G:A | - | 0.0669607703097658 | 0.00242974823366495 | LUAD | Female-baised eQTL |
| rs58919345 | chr3:65233384:G:T | - | 0.0877120851175079 | 0.00435883279222608 | LUAD | Female-baised eQTL |
| rs6785868 | chr3:71562578:A:C | - | -0.0503488304113102 | 0.0136685396415554 | LUAD | Female-baised eQTL |
| rs9834492 | chr3:71565123:G:A | - | -0.0503488304113102 | 0.0136685396415554 | LUAD | Female-baised eQTL |
| rs1079409 | chr3:71530873:A:C | - | -0.0487777984471279 | 0.0137733452743967 | LUAD | Female-baised eQTL |
| rs13316357 | chr3:71565867:A:G | - | -0.0501279539317908 | 0.0142262436639331 | LUAD | Female-baised eQTL |
| rs55910431 | chr3:62707253:T:C | - | 0.0463241512230946 | 0.0192144115637868 | LUAD | Female-baised eQTL |
| rs9879910 | chr3:71567783:A:G | - | -0.0480232610495827 | 0.0229235359998054 | LUAD | Female-baised eQTL |
| rs1396274 | chr3:62068922:A:C | gene | 0.0654110769710172 | 0.0244439970117789 | LUAD | Female-baised eQTL |
| rs6768519 | chr3:62714156:C:T | - | 0.0442439224225328 | 0.0262476085718354 | LUAD | Female-baised eQTL |
| rs7626335 | chr3:71526026:A:C | - | -0.045464611147144 | 0.027028603955998 | LUAD | Female-baised eQTL |
| rs11924650 | chr3:54224911:C:T | - | 0.050917593069845 | 0.0278433306435189 | LUAD | Female-baised eQTL |
| rs878172 | chr3:71573298:A:G | - | -0.045327602265592 | 0.0286598075313239 | LUAD | Female-baised eQTL |
| rs1979843 | chr3:71533457:T:A | - | -0.0448924145963356 | 0.0369740538376018 | LUAD | Female-baised eQTL |
| rs17718831 | chr3:71508714:G:A | - | -0.0441579642044315 | 0.0370881242941717 | LUAD | Female-baised eQTL |
| rs7641375 | chr3:57582717:A:C | - | -0.0442527289352855 | 0.0400258552010334 | LUAD | Female-baised eQTL |
| rs844218 | chr3:71558710:A:G | - | -0.0470538092587087 | 0.0423290541463664 | LUAD | Female-baised eQTL |
| rs2634722 | chr3:67546390:C:T | - | 0.0869009699073452 | 0.0427934647775361 | LUAD | Female-baised eQTL |
| rs2634721 | chr3:67546576:A:T | - | 0.0869009699073452 | 0.0427934647775361 | LUAD | Female-baised eQTL |
| rs34666190 | chr3:67546844:C:T | - | 0.0869009699073452 | 0.0427934647775361 | LUAD | Female-baised eQTL |
| rs11915444 | chr3:54226847:T:C | - | 0.0463922718153693 | 0.0454675689554938 | LUAD | Female-baised eQTL |
| rs4688141 | chr3:62710971:G:C | - | 0.0423851273464433 | 0.0485083382227163 | LUAD | Female-baised eQTL |
| rs6763602 | chr3:54224356:A:G | - | 0.0495513373779891 | 0.0485812606370404 | LUAD | Female-baised eQTL |
| rs9812892 | chr3:67790673:C:G | - | 0.115058672275347 | 0.00747524178569159 | COAD | Female-baised eQTL |
| rs2367433 | chr3:62972300:G:A | - | 0.121145607178472 | 0.0308646580347816 | COAD | Female-baised eQTL |
| rs113729770 | chr3:54440983:G:A | - | 0.0754400019889103 | 0.0346662604181483 | COAD | Female-baised eQTL |
| rs74412850 | chr3:54440995:A:T | - | -0.073635001349619 | 0.040958525380728 | COAD | Female-baised eQTL |
| rs4974362 | chr3:54442747:A:G | - | -0.073635001349619 | 0.040958525380728 | COAD | Female-baised eQTL |
| rs1375515 | chr3:54442613:C:T | - | -0.0736146786531456 | 0.0412773206309582 | COAD | Female-baised eQTL |
| rs4277682 | chr3:63561645:T:A | - | 0.128775894171915 | 0.043305111198525 | COAD | Female-baised eQTL |
| rs6802686 | chr3:62780170:G:T | - | -0.0667319541649151 | 0.0437478948661287 | COAD | Female-baised eQTL |
| rs581043 | chr3:62844440:T:C | - | -0.074667048462527 | 0.0445881037064877 | COAD | Female-baised eQTL |
| Female-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs141718186 | chr3:71266523:A:T | - | 0.0923312484516222 | 0.028029556772188 | LIHC | Male-baised eQTL |
| rs10048939 | chr3:66642464:A:T | - | -0.0873397793500161 | 0.0052462339603246 | STAD | Male-baised eQTL |
| rs12629940 | chr3:66641767:T:C | - | -0.0872295488826491 | 0.00527118697249671 | STAD | Male-baised eQTL |
| rs13098431 | chr3:66640606:T:C | - | -0.082819852341715 | 0.0161050522446174 | STAD | Male-baised eQTL |
| rs9311720 | chr3:59705385:T:A | - | 0.0905926895635066 | 0.0160943427704454 | KIRC | Male-baised eQTL |
| rs75234740 | chr3:61189365:C:A | - | 0.0701504748677583 | 0.0482224665518974 | KIRC | Male-baised eQTL |
| rs144278909 | chr3:61189395:G:C | - | 0.0701504748677583 | 0.0482224665518974 | KIRC | Male-baised eQTL |
| rs17253119 | chr3:54896746:A:G | - | 0.111585402259453 | 1.01012382981842e-05 | BLCA | Male-baised eQTL |
| rs17054525 | chr3:54898913:G:A | - | 0.0789597068325176 | 0.000834325246037812 | BLCA | Male-baised eQTL |
| rs60141358 | chr3:54905562:G:A | - | 0.0765611442352235 | 0.00144153532294758 | BLCA | Male-baised eQTL |
| rs10514715 | chr3:54905484:G:A | - | 0.101761155133683 | 0.00159097352064844 | BLCA | Male-baised eQTL |
| rs78139354 | chr3:54905944:G:A | - | 0.101761155133683 | 0.00159097352064844 | BLCA | Male-baised eQTL |
| rs61029595 | chr3:54901235:G:A | - | 0.0771235414357311 | 0.00184979135299407 | BLCA | Male-baised eQTL |
| rs17253231 | chr3:54900027:A:C | - | 0.098926584733962 | 0.0025042840014171 | BLCA | Male-baised eQTL |
| rs80127917 | chr3:54900201:A:G | - | 0.098926584733962 | 0.0025042840014171 | BLCA | Male-baised eQTL |
| rs17319169 | chr3:54901513:A:G | - | 0.0988199775505412 | 0.00256971020390477 | BLCA | Male-baised eQTL |
| rs17320026 | chr3:54921871:G:T | - | 0.0936950371860869 | 0.0147978338793745 | BLCA | Male-baised eQTL |
| rs74883401 | chr3:54908041:C:A | - | 0.0927526115125551 | 0.0156437583010331 | BLCA | Male-baised eQTL |
| rs80120384 | chr3:54908192:A:G | - | 0.0924994059154383 | 0.0162477665007316 | BLCA | Male-baised eQTL |
| rs77378286 | chr3:54899301:A:G | - | 0.0897650222215284 | 0.0167632494539758 | BLCA | Male-baised eQTL |
| rs75991089 | chr3:54896206:G:A | - | 0.0909527697223307 | 0.0185385975944075 | BLCA | Male-baised eQTL |
| rs79183578 | chr3:54920802:G:A | - | 0.0855275928574478 | 0.0317944035634017 | BLCA | Male-baised eQTL |
| rs802933 | chr3:60211757:G:A | - | -0.054084603405493 | 0.0331537189597847 | BLCA | Male-baised eQTL |
| rs13060977 | chr3:64387935:T:C | - | 0.0788426817479505 | 0.0442940063625009 | BLCA | Male-baised eQTL |
| rs4856897 | chr3:67839127:A:T | - | -0.155927465525371 | 1.40021084751963e-06 | LUAD | Male-baised eQTL |
| rs77047703 | chr3:53452222:A:G | - | 0.126979392510439 | 0.000605345993661761 | LUAD | Male-baised eQTL |
| rs9863778 | chr3:55341923:C:T | - | 0.113458694663542 | 0.00618201343241795 | LUAD | Male-baised eQTL |
| rs4688451 | chr3:64416101:C:T | - | -0.0821907521597394 | 0.00636502725490057 | LUAD | Male-baised eQTL |
| rs9798818 | chr3:67163959:A:G | - | 0.116672869494009 | 0.00737422341710119 | LUAD | Male-baised eQTL |
| rs6800915 | chr3:56208696:A:G | - | -0.11069919470227 | 0.012592537210685 | LUAD | Male-baised eQTL |
| rs72892873 | chr3:64683939:G:A | - | 0.143629605571085 | 0.0133901362681968 | LUAD | Male-baised eQTL |
| rs72892872 | chr3:64683656:T:G | - | 0.143144422618828 | 0.014090816170709 | LUAD | Male-baised eQTL |
| rs4679492 | chr3:59541470:T:C | - | -0.0653586018369692 | 0.0160019919492128 | LUAD | Male-baised eQTL |
| rs4429652 | chr3:67829944:A:G | - | 0.134236232278582 | 0.016702099088395 | LUAD | Male-baised eQTL |
| rs13320853 | chr3:55348912:C:T | - | 0.0983153612760217 | 0.0168383315109019 | LUAD | Male-baised eQTL |
| rs6787924 | chr3:55353002:C:T | - | 0.101605567814876 | 0.0178487352443859 | LUAD | Male-baised eQTL |
| rs7621086 | chr3:57422016:G:T | - | -0.0829018232416218 | 0.0205464056275849 | LUAD | Male-baised eQTL |
| rs9842885 | chr3:55337948:G:A | - | 0.100255562410963 | 0.021427454606761 | LUAD | Male-baised eQTL |
| rs73071520 | chr3:55337107:T:C | - | 0.100018258885433 | 0.0221976445873641 | LUAD | Male-baised eQTL |
| rs11130718 | chr3:59544049:T:A | - | -0.0606427986614914 | 0.0232011350470773 | LUAD | Male-baised eQTL |
| rs4292247 | chr3:67479641:G:C | - | 0.0873872970246247 | 0.0237028431160216 | LUAD | Male-baised eQTL |
| rs6808430 | chr3:71579006:T:C | - | 0.126199232641419 | 0.025457328505938 | LUAD | Male-baised eQTL |
| rs55818812 | chr3:59527187:T:G | - | 0.108801355900495 | 0.0261370490377044 | LUAD | Male-baised eQTL |
| rs113559643 | chr3:67832007:C:G | - | 0.127669379679536 | 0.0262085996340796 | LUAD | Male-baised eQTL |
| rs1995416 | chr3:59543538:A:C | - | -0.0611363903983013 | 0.026868907338897 | LUAD | Male-baised eQTL |
| rs1995417 | chr3:59543595:A:G | - | -0.0611363903983013 | 0.026868907338897 | LUAD | Male-baised eQTL |
| rs902710 | chr3:70094308:T:C | - | 0.0867445820443886 | 0.0311050363319169 | LUAD | Male-baised eQTL |
| rs6445877 | chr3:57419882:T:C | - | -0.0796641506433327 | 0.0320817001754748 | LUAD | Male-baised eQTL |
| rs6445878 | chr3:57419933:T:C | - | -0.0796641506433327 | 0.0320817001754748 | LUAD | Male-baised eQTL |
| rs2127521 | chr3:65396465:T:C | - | -0.0906432127826336 | 0.0328585976477318 | LUAD | Male-baised eQTL |
| rs1523111 | chr3:57414983:A:G | - | -0.0797935673405762 | 0.0333798395629 | LUAD | Male-baised eQTL |
| rs13086332 | chr3:59542553:C:T | - | -0.0600917460522063 | 0.034462585842667 | LUAD | Male-baised eQTL |
| rs931761 | chr3:59542897:G:C | - | -0.0600917460522063 | 0.034462585842667 | LUAD | Male-baised eQTL |
| rs10780041 | chr3:59544999:A:G | - | -0.0597649673128209 | 0.0355116728003499 | LUAD | Male-baised eQTL |
| rs1502617 | chr3:59544677:G:A | - | -0.0607389422953899 | 0.0355444618993291 | LUAD | Male-baised eQTL |
| rs9858271 | chr3:59559604:G:A | - | -0.062990176686482 | 0.0401908605859598 | LUAD | Male-baised eQTL |
| rs6805018 | chr3:59566905:T:G | - | -0.062990176686482 | 0.0401908605859598 | LUAD | Male-baised eQTL |
| rs6805224 | chr3:59567115:T:C | - | -0.062990176686482 | 0.0401908605859598 | LUAD | Male-baised eQTL |
| rs7613096 | chr3:67842330:C:G | - | -0.0777179520774318 | 0.0439022835790651 | LUAD | Male-baised eQTL |
| rs113811490 | chr3:55354923:G:T | - | 0.117095610472015 | 0.0444082951711948 | LUAD | Male-baised eQTL |
| rs149711244 | chr3:55354930:T:C | - | 0.117095610472015 | 0.0444082951711948 | LUAD | Male-baised eQTL |
| rs7622307 | chr3:59564687:G:A | - | -0.0625478779506133 | 0.044923403547616 | LUAD | Male-baised eQTL |
| rs6798277 | chr3:55883921:A:C | - | 0.118785109127837 | 0.0471606493314763 | LUAD | Male-baised eQTL |
| rs2271122 | chr3:69035283:T:C | - | -0.100558260422078 | 3.19643729021449e-10 | COAD | Male-baised eQTL |
| rs6777859 | chr3:66883589:C:T | - | 0.103624032058149 | 3.07547774619007e-09 | COAD | Male-baised eQTL |
| rs11720720 | chr3:65833795:C:T | - | 0.159026895222684 | 5.32875070826741e-06 | COAD | Male-baised eQTL |
| rs11713645 | chr3:65834005:A:G | - | 0.140831372495009 | 6.18910053832656e-05 | COAD | Male-baised eQTL |
| rs76284788 | chr3:60801157:A:G | - | 0.167298386155041 | 0.000130718546262502 | COAD | Male-baised eQTL |
| rs73111756 | chr3:60841816:A:G | - | 0.148930005271331 | 0.000209288521269245 | COAD | Male-baised eQTL |
| rs2594119 | chr3:60863430:C:T | - | 0.147792322959438 | 0.000237749481056365 | COAD | Male-baised eQTL |
| rs190311538 | chr3:60860955:A:G | - | 0.145298503508734 | 0.000355145120497716 | COAD | Male-baised eQTL |
| rs59997916 | chr3:65835245:C:T | - | 0.117838752581664 | 0.000376731663197349 | COAD | Male-baised eQTL |
| rs9990051 | chr3:60946948:G:C | - | -0.0647181973143031 | 0.000431220943913323 | COAD | Male-baised eQTL |
| rs35118308 | chr3:65784248:C:T | - | 0.0778362823565183 | 0.000469588677921312 | COAD | Male-baised eQTL |
| rs73095237 | chr3:60882296:C:T | - | 0.139707947372162 | 0.000471535383820906 | COAD | Male-baised eQTL |
| rs73095247 | chr3:60883532:A:G | - | 0.139707947372162 | 0.000471535383820906 | COAD | Male-baised eQTL |
| rs17632681 | chr3:60909907:G:T | - | 0.135367500806696 | 0.000552914725726757 | COAD | Male-baised eQTL |
| rs2594130 | chr3:60858590:C:G | - | 0.137259195458166 | 0.000681514479390313 | COAD | Male-baised eQTL |
| rs2734345 | chr3:60859454:C:G | - | 0.135817998299906 | 0.000848052793458933 | COAD | Male-baised eQTL |
| rs56408360 | chr3:60988072:G:T | - | 0.134416518069169 | 0.000861423946127415 | COAD | Male-baised eQTL |
| rs73092730 | chr3:60857487:T:C | - | 0.133980431377686 | 0.000868252901546653 | COAD | Male-baised eQTL |
| rs73090785 | chr3:59660913:T:G | - | 0.0870099992163522 | 0.00097889086542485 | COAD | Male-baised eQTL |
| rs6549444 | chr3:72157717:A:G | - | -0.0716611794924653 | 0.00104767318862228 | COAD | Male-baised eQTL |
| rs9873216 | chr3:64133522:G:A | - | 0.0615220950067821 | 0.00119253203823997 | COAD | Male-baised eQTL |
| rs358924 | chr3:55619677:A:G | - | 0.1075971041389 | 0.00122269176313938 | COAD | Male-baised eQTL |
| rs6782531 | chr3:61009928:G:C | - | 0.100471142497934 | 0.00122680123986836 | COAD | Male-baised eQTL |
| rs6808753 | chr3:54699821:T:C | - | 0.13945500914857 | 0.00126199147210054 | COAD | Male-baised eQTL |
| rs73070486 | chr3:54709878:G:C | - | 0.139388391043627 | 0.00128072941447176 | COAD | Male-baised eQTL |
| rs17632419 | chr3:60903818:G:A | - | 0.12426420799066 | 0.00131377095905054 | COAD | Male-baised eQTL |
| rs73111752 | chr3:60836459:G:C | - | 0.124835323592972 | 0.00155524565633386 | COAD | Male-baised eQTL |
| rs9818720 | chr3:66774127:G:C | - | 0.0941875859904102 | 0.0019061497968912 | COAD | Male-baised eQTL |
| rs62245162 | chr3:72109597:A:T | - | 0.0904895734476761 | 0.00200395857381528 | COAD | Male-baised eQTL |
| rs6771130 | chr3:71446857:T:C | - | 0.0584845458079818 | 0.00202613840745364 | COAD | Male-baised eQTL |
| rs74512191 | chr3:71334616:C:T | - | 0.0719416235565423 | 0.00220448156699363 | COAD | Male-baised eQTL |
| rs62245163 | chr3:72111069:T:C | - | 0.0899544235290971 | 0.00230275469575094 | COAD | Male-baised eQTL |
| rs73097817 | chr3:60896615:T:C | - | 0.119136000577698 | 0.00230457894648544 | COAD | Male-baised eQTL |
| rs17683604 | chr3:60903302:C:T | - | 0.119136000577698 | 0.00230457894648544 | COAD | Male-baised eQTL |
| rs17656603 | chr3:71457204:T:G | - | 0.0601860721752101 | 0.00234419333855108 | COAD | Male-baised eQTL |
| rs73095283 | chr3:60889410:T:C | - | 0.114474610904588 | 0.0023880644929483 | COAD | Male-baised eQTL |
| rs73095287 | chr3:60889610:G:A | - | 0.114474610904588 | 0.0023880644929483 | COAD | Male-baised eQTL |
| rs2649191 | chr3:65785241:G:C | - | 0.0692545266617214 | 0.00241246862407465 | COAD | Male-baised eQTL |
| rs17009402 | chr3:72113783:G:T | - | 0.0889540846810464 | 0.00274390105220056 | COAD | Male-baised eQTL |
| rs61512317 | chr3:72117622:C:T | - | 0.0889540846810464 | 0.00274390105220056 | COAD | Male-baised eQTL |
| rs73839283 | chr3:59431820:A:C | - | 0.108769295274404 | 0.00329851625328137 | COAD | Male-baised eQTL |
| rs4355314 | chr3:65783762:T:C | - | 0.0669499093958522 | 0.00383284060856301 | COAD | Male-baised eQTL |
| rs11721065 | chr3:65545031:A:C | - | 0.059736704036648 | 0.00391392151865353 | COAD | Male-baised eQTL |
| rs7629161 | chr3:72112399:C:T | - | 0.0865981942592177 | 0.00396142518553669 | COAD | Male-baised eQTL |
| rs56038410 | chr3:54711406:C:G | - | 0.122792730646214 | 0.00398649818223979 | COAD | Male-baised eQTL |
| rs1735453 | chr3:60688476:A:G | - | -0.107847990772151 | 0.00465366154915412 | COAD | Male-baised eQTL |
| rs58833171 | chr3:65834836:C:G | - | 0.124725973457773 | 0.00488655375898788 | COAD | Male-baised eQTL |
| rs59027801 | chr3:65835181:T:C | - | 0.124725973457773 | 0.00488655375898788 | COAD | Male-baised eQTL |
| rs4856981 | chr3:67037089:G:A | - | 0.0571631925003002 | 0.00549601263067198 | COAD | Male-baised eQTL |
| rs75854628 | chr3:55310499:A:G | - | 0.102888124120369 | 0.00738226408517634 | COAD | Male-baised eQTL |
| rs3755718 | chr3:69079531:T:C | - | -0.0567722472735483 | 0.00885511646640309 | COAD | Male-baised eQTL |
| rs4594634 | chr3:59037511:G:C | - | 0.0627741710685331 | 0.0121620578709084 | COAD | Male-baised eQTL |
| rs73839272 | chr3:59426531:C:A | - | 0.0964398094217628 | 0.0125152812967491 | COAD | Male-baised eQTL |
| rs2704800 | chr3:71272611:T:C | - | -0.0593171134412283 | 0.0133638224670203 | COAD | Male-baised eQTL |
| rs6785875 | chr3:61257937:T:C | - | 0.0505486756341193 | 0.0139957984875529 | COAD | Male-baised eQTL |
| rs10510765 | chr3:53712179:G:C | - | 0.0681114898018907 | 0.014149105402872 | COAD | Male-baised eQTL |
| rs7616696 | chr3:63168765:C:T | - | 0.111357541611118 | 0.0149128138896458 | COAD | Male-baised eQTL |
| rs9859586 | chr3:71347327:A:G | - | 0.0573448120035808 | 0.0160305141067665 | COAD | Male-baised eQTL |
| rs697279 | chr3:64193034:T:C | - | 0.0538231085921054 | 0.0162197518336377 | COAD | Male-baised eQTL |
| rs55670886 | chr3:54711442:A:C | - | 0.104731159518113 | 0.0164753028238184 | COAD | Male-baised eQTL |
| rs77544771 | chr3:68956499:G:A | - | 0.109778634230835 | 0.0172961816425051 | COAD | Male-baised eQTL |
| rs646847 | chr3:55451999:T:A | - | -0.0655864932018935 | 0.0182692508356239 | COAD | Male-baised eQTL |
| rs73092085 | chr3:53750295:A:T | - | 0.0693317403989491 | 0.0195783942154566 | COAD | Male-baised eQTL |
| rs815533 | chr3:55441245:A:G | - | -0.0717143287498391 | 0.0196624861190953 | COAD | Male-baised eQTL |
| rs49411 | chr3:59771849:T:C | - | -0.0501053840724615 | 0.0205518017456138 | COAD | Male-baised eQTL |
| rs17060624 | chr3:59425857:C:T | - | 0.0859940253032406 | 0.02118400480474 | COAD | Male-baised eQTL |
| rs9843324 | chr3:59426089:G:C | - | 0.0859940253032406 | 0.02118400480474 | COAD | Male-baised eQTL |
| rs59926598 | chr3:59426177:C:T | - | 0.0859940253032406 | 0.02118400480474 | COAD | Male-baised eQTL |
| rs11705918 | chr3:53755671:C:G | - | 0.0689154913400407 | 0.0215415821853016 | COAD | Male-baised eQTL |
| rs1495453 | chr3:65776872:G:A | - | -0.0522846765210538 | 0.0218195716782364 | COAD | Male-baised eQTL |
| rs780358 | chr3:59773393:A:G | - | -0.0677415564401977 | 0.0241209277046482 | COAD | Male-baised eQTL |
| rs147072820 | chr3:61044060:A:C | - | 0.126583143642108 | 0.0244220644236455 | COAD | Male-baised eQTL |
| rs4688599 | chr3:65772856:A:C | - | -0.0533094120662244 | 0.0256962489593495 | COAD | Male-baised eQTL |
| rs13099983 | chr3:64200176:A:G | - | -0.0527792916078165 | 0.0266880385304914 | COAD | Male-baised eQTL |
| rs994930 | chr3:59756136:T:C | - | 0.0488411001829308 | 0.0271150653656624 | COAD | Male-baised eQTL |
| rs9865527 | chr3:71348761:A:G | - | 0.0537379020772968 | 0.0286468685795304 | COAD | Male-baised eQTL |
| rs34661857 | chr3:60204041:G:C | - | -0.0579505074652356 | 0.0289947248630711 | COAD | Male-baised eQTL |
| rs2594254 | chr3:60570635:T:C | - | -0.0522023677248064 | 0.0291429209132063 | COAD | Male-baised eQTL |
| rs190226890 | chr3:58148072:G:C | - | 0.0844239821659943 | 0.0304780125445601 | COAD | Male-baised eQTL |
| rs57354217 | chr3:72108085:G:A | - | 0.0735306671052968 | 0.0323382971610119 | COAD | Male-baised eQTL |
| rs845542 | chr3:55458022:C:T | - | -0.0600116756030761 | 0.0339567561659721 | COAD | Male-baised eQTL |
| rs645486 | chr3:55458298:C:A | - | -0.0600116756030761 | 0.0339567561659721 | COAD | Male-baised eQTL |
| rs2314319 | chr3:68797787:G:A | - | -0.0660157790638011 | 0.0341838397832558 | COAD | Male-baised eQTL |
| rs669889 | chr3:55466974:G:C | - | -0.0598779612682524 | 0.0345750861139701 | COAD | Male-baised eQTL |
| rs9881474 | chr3:60135493:C:T | - | 0.0803054336683018 | 0.0352978407470786 | COAD | Male-baised eQTL |
| rs12488822 | chr3:57283752:T:C | - | -0.0469860962532176 | 0.0356709807135511 | COAD | Male-baised eQTL |
| rs6796042 | chr3:71480969:A:G | - | -0.0517884644607265 | 0.0370662405045256 | COAD | Male-baised eQTL |
| rs1517932 | chr3:65032954:C:G | - | 0.0494166931332803 | 0.0386734854175237 | COAD | Male-baised eQTL |
| rs9849137 | chr3:59427385:G:A | - | 0.0797359482757537 | 0.0390589009674255 | COAD | Male-baised eQTL |
| rs12632137 | chr3:72236544:G:A | - | -0.0490954351082167 | 0.0391671291552478 | COAD | Male-baised eQTL |
| rs7610987 | chr3:71646398:A:T | - | 0.0487624033690791 | 0.0392751671815949 | COAD | Male-baised eQTL |
| rs3774574 | chr3:53766116:T:C | - | 0.0593890151531456 | 0.0400823148406322 | COAD | Male-baised eQTL |
| rs12632171 | chr3:72236646:G:T | - | -0.0492701628106865 | 0.0402412030633399 | COAD | Male-baised eQTL |
| rs150449861 | chr3:68811965:C:T | - | -0.0586764102408234 | 0.0405731873764659 | COAD | Male-baised eQTL |
| rs7433997 | chr3:68815553:G:A | - | -0.0586764102408234 | 0.0405731873764659 | COAD | Male-baised eQTL |
| rs9817016 | chr3:71573700:C:T | - | -0.0489362565017091 | 0.040652746362552 | COAD | Male-baised eQTL |
| rs185770770 | chr3:59128067:C:T | - | 0.0567989389864358 | 0.040882682840928 | COAD | Male-baised eQTL |
| rs141913016 | chr3:68813125:G:A | - | -0.062770648776325 | 0.0412656621459236 | COAD | Male-baised eQTL |
| rs937760 | chr3:59638383:G:A | - | 0.0527291694433526 | 0.0417070626374797 | COAD | Male-baised eQTL |
| rs76499346 | chr3:68814692:T:C | - | -0.0627152084139697 | 0.0423299095036104 | COAD | Male-baised eQTL |
| rs7650449 | chr3:68817272:T:C | - | -0.0627152084139697 | 0.0423299095036104 | COAD | Male-baised eQTL |
| rs6789491 | chr3:71574452:A:G | - | -0.0488130524247532 | 0.0425236972273325 | COAD | Male-baised eQTL |
| rs2371753 | chr3:64800956:T:C | - | -0.0458380071331963 | 0.0425303078125542 | COAD | Male-baised eQTL |
| rs55691267 | chr3:68819414:G:C | - | -0.0634425681358498 | 0.043029963079667 | COAD | Male-baised eQTL |
| rs7647961 | chr3:68817197:A:G | - | -0.0633837938911965 | 0.0441248666043491 | COAD | Male-baised eQTL |
| rs780366 | chr3:59776390:A:G | - | -0.0599179317277868 | 0.0443384055131288 | COAD | Male-baised eQTL |
| rs17060743 | chr3:59459972:T:C | - | 0.0746849088649352 | 0.0445957824685515 | COAD | Male-baised eQTL |
| rs11128254 | chr3:72236461:C:T | - | -0.0485018187483888 | 0.0446011289078848 | COAD | Male-baised eQTL |
| rs1524969 | chr3:65494792:C:T | - | 0.0480578461536615 | 0.0448731122571474 | COAD | Male-baised eQTL |
| rs35994466 | chr3:68819932:G:T | - | -0.062845124438118 | 0.0453046682174881 | COAD | Male-baised eQTL |
| rs72925176 | chr3:68809985:G:A | - | -0.0629442311113021 | 0.0454835441424698 | COAD | Male-baised eQTL |
| rs73102224 | chr3:60984714:A:G | - | 0.0793753288212519 | 0.046055355525888 | COAD | Male-baised eQTL |
| rs2130438 | chr3:68820183:G:A | - | -0.0582952068796141 | 0.0463205694959262 | COAD | Male-baised eQTL |
| rs476986 | chr3:55459486:C:A | - | -0.0580259612450151 | 0.0467858453518946 | COAD | Male-baised eQTL |
| rs6779703 | chr3:60048394:G:T | - | -0.0460551697615506 | 0.0470566833216426 | COAD | Male-baised eQTL |
| rs11708862 | chr3:59505464:A:T | - | 0.0530677149072059 | 0.047214999210601 | COAD | Male-baised eQTL |
| rs11713039 | chr3:58229834:C:A | - | 0.0861621508095669 | 0.0474703654020896 | COAD | Male-baised eQTL |
| rs1281439 | chr3:59630906:C:T | - | 0.0519713855717689 | 0.0481026868633191 | COAD | Male-baised eQTL |
| rs628624 | chr3:55456786:G:C | - | -0.0577229843433014 | 0.0488230779414204 | COAD | Male-baised eQTL |
| rs939496 | chr3:60609670:T:C | - | -0.0614547266728431 | 0.048913308671983 | COAD | Male-baised eQTL |
| rs9871910 | chr3:68922709:G:A | - | 0.0592210762867713 | 0.0490495418334167 | COAD | Male-baised eQTL |
| rs71311839 | chr3:58149228:C:T | - | 0.079791942130758 | 0.0497627312465271 | COAD | Male-baised eQTL |
| Opposite sex-biased eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Sex-biased Gene in Cancer | Cancer Type |
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Sex-biased eQTM regulation of gene |
| Sex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table). |
| eQTM | Description |
 | Gene ID: ENSG00000144724 |
| CpG Site: cg08548409 | |
| Position to Gene: gene,enhancer | |
| Male Effect: -0.459544430292728 | |
| Female Effect: - | |
 | Gene ID: ENSG00000144724 |
| CpG Site: cg20559405 | |
| Position to Gene: gene | |
| Male Effect: -0.459544430292728 | |
| Female Effect: - | |
 | Gene ID: ENSG00000144724 |
| CpG Site: cg08548409 | |
| Position to Gene: gene,enhancer | |
| Male Effect: -0.435523609838185 | |
| Female Effect: - |
| Male-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
| cg08548409 | chr3:61564961 | gene,enhancer | -0.459544430292728 | 9.78310783454902e-33 | -0.835910884164555 | 3.0074541740053415e-37 | THCA |
| cg20559405 | chr3:61594869 | gene | -0.459544430292728 | 9.78310783454902e-33 | -0.835910884164555 | 3.0074541740053415e-37 | THCA |
| cg08548409 | chr3:61564961 | gene,enhancer | -0.435523609838185 | 2.80847436907905e-11 | -0.42877268162966037 | 1.732704993142182e-14 | SKCM |
| Female-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
| Opposite sex-biased eQTM regulation. |
| CpG Site | CpG Postion | CpG Island | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Male Cor | Male P-value | Female Cor | Female P-value | Sex-biased Coding Gene | Cancer Type |
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Sex-biased sQTL regulation of gene |
| Sex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTL | Description |
| Male-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs67626913 | chr3:61803235:G:A | Distant upstream | -0.0668607410225864 | 0.0359137528911844 | LGG | Female-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs73111553 | chr3:61534329:G:A | Distant upstream | 0.0354894017092743 | 0.000828229843435078 | THCA | Female-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs13081626 | chr3:62829437:C:T | Distant downstream | 0.0170745512383766 | 0.0273247082662515 | THCA | Female-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs2164881 | chr3:62828853:C:T | Distant downstream | 0.016848615196424 | 0.0317849957236217 | THCA | Female-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs304180 | chr3:62834210:C:T | Distant downstream | -0.0152761052728673 | 0.0344536725595526 | THCA | Female-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs12491258 | chr3:62828446:T:A | Distant downstream | 0.0166780886273596 | 0.0351851340554395 | THCA | Female-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs13067730 | chr3:62802360:C:T | Distant downstream | 0.0158168715587326 | 0.0416734857866844 | THCA | Female-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs7646467 | chr3:62840273:G:T | Distant downstream | 0.0168455000354588 | 0.0424365187534956 | THCA | Female-baised sQTL |
| Female-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs658432 | chr3:61784633:A:G | Distant upstream | -0.0319176557596299 | 0.0216575292970947 | KIRC | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs612089 | chr3:61764139:T:C | Distant upstream | -0.0273061073664268 | 0.0358115214151155 | KIRC | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs9808954 | chr3:61598797:G:A | Distant upstream | 0.044197978533052 | 0.014646329660168 | LGG | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs74530693 | chr3:61599774:A:G | Distant upstream | 0.0437172523430419 | 0.0168313766207707 | LGG | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs9862251 | chr3:61601896:A:G | Distant upstream | 0.0437172523430419 | 0.0168313766207707 | LGG | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs13434097 | chr3:61600376:A:G | Distant upstream | 0.0434914605303836 | 0.0178983949249113 | LGG | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs28703149 | chr3:61596737:A:G | Distant upstream | 0.0434785314670097 | 0.0211499311974017 | LGG | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs113107393 | chr3:61600138:C:T | Distant upstream | 0.0420073159620785 | 0.0274558986178134 | LGG | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs9848768 | chr3:61604140:A:G | Distant upstream | 0.0416916167817828 | 0.0320314399622482 | LGG | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs9823898 | chr3:61601269:G:A | Distant upstream | 0.0410307423101661 | 0.038174651113904 | LGG | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs9832251 | chr3:61604843:T:C | Distant upstream | 0.0408909077260242 | 0.0395332520467225 | LGG | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs13434101 | chr3:61600507:A:G | Distant upstream | 0.0402759037861144 | 0.039694090553691 | LGG | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs7640394 | chr3:61605493:G:T | Distant upstream | 0.0408537175881745 | 0.0398902699818287 | LGG | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs9819391 | chr3:61600796:G:A | Distant upstream | 0.0408265927904929 | 0.0399927513705252 | LGG | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs62243058 | chr3:61603177:G:A | Distant upstream | 0.040475953376648 | 0.0463861330160583 | LGG | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs62243059 | chr3:61603424:T:C | Distant upstream | 0.040475953376648 | 0.0463861330160583 | LGG | Male-baised sQTL |
| exon_skip_375724 | chr3:62231224:62231311 | In-frame | rs591988 | chr3:61862021:C:T | Distant upstream | -0.0272670999388455 | 0.0360934822990668 | THCA | Male-baised sQTL |
| Opposite sex-biased sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Male Effect | Male FDR | Female Effect | Female FDR | Cancer Type |
Top |
Sex-biased sQTM regulation of gene |
| Sex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTM | Description |
| Male-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
| Female-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
| Opposite sex-biased sQTM regulation. |
| EX ID | EX Info | Skipped Exon | CPG Site | CPG Position | CPG Island | Position to EX Events | Male Effect | Male FDR | Female Effect | Female FDR | Male Correlation | Male P-value | Female Correlation | Female P-value | ORF_anno | Cancer Type |
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Related disease information of PTPRG |
| Diseases associated with this gene (DisGeNET). |
| Gene ID | Gene Symbol | Disease ID | Disease Name | Number of PMID | Source |
| ENSG00000144724 | PTPRG | C0024623 | Malignant neoplasm of stomach | 1 | CTD_human |
| ENSG00000144724 | PTPRG | C0038356 | Stomach Neoplasms | 1 | CTD_human |
| ENSG00000144724 | PTPRG | C1708349 | Hereditary Diffuse Gastric Cancer | 1 | CTD_human |
