SexAnnoDB Logo

Home

Download

Statistics

Examples

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Gene structure and Gene expression level

leaf

Sex-biased somatic mutation

leaf

DNA methylation with beta values in gene

leaf

Exon skipping events with PSI in TCGA

leaf

RNA A-to-I editing events in TCGA

leaf

Sex-biased TF-Gene network of gene

leaf

Sex-biased RBP-ES network of gene

leaf

Sex-biased CeRNA regulation of gene

leaf

Sex-biased eQTL regulation of gene

leaf

Sex-biased eQTM regulation of gene

leaf

Sex-biased sQTL regulation of gene

leaf

Sex-biased sQTM regulation of gene

leaf

Related disease information of gene

Gene: ENSG00000144354

Summary for CDCA7

check button Gene summary

Gene informationEnsembl ID

ENSG00000144354

Gene symbol

CDCA7

Gene namecell division cycle associated 7
HGNC

14628

Entrez ID

83879

Gene typeprotein_coding
SynonymsCDCA7|FLJ14736|JPO1
UniProtAcc

Q9BWT1


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

Top

Structure and expression level for CDCA7

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
CDCA76.63e+02-1.84e+005.14e-01-3.57e+003.54e-045.33e-03BRCA

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
CDCA71.49e+031.05e+001.86e-015.66e+001.50e-087.38e-08HNSC
CDCA74.16e+031.96e+003.82e-015.14e+002.72e-078.13e-06ESCA
CDCA73.27e+025.03e+006.31e-017.97e+001.58e-157.15e-14CHOL

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
CDCA72.74e+023.30e+005.06e-016.51e+007.45e-114.39e-09KIRP
CDCA76.31e+021.37e+001.71e-018.05e+008.50e-162.41e-15BRCA
CDCA75.36e+031.79e+002.72e-016.59e+004.44e-111.34e-09READ

Top

Sex-biased somatic mutation for CDCA7

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

Top

DNA methylation with beta values for CDCA7

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
THCAcg21583565chr2:173354608CGI:chr2:173354805-173355640promoter1.44e-014.37e-022.74e+006.14e-031.17e-021.00e-01
LIHCcg24776469chr2:173354620CGI:chr2:173354805-173355640promoter2.68e-011.06e-012.30e+002.17e-022.40e-021.62e-01
LIHCcg24937696chr2:173354806CGI:chr2:173354805-173355640promoter2.32e-015.35e-022.80e+005.18e-036.81e-031.78e-01
LIHCcg21583565chr2:173354608CGI:chr2:173354805-173355640promoter3.94e-012.42e-012.13e+003.30e-023.47e-021.51e-01
LIHCcg13484295chr2:173355358CGI:chr2:173354805-173355640promoter,gene body2.68e-019.16e-022.68e+007.35e-039.27e-031.76e-01
CHOLcg07302848chr2:173354774CGI:chr2:173354805-173355640promoter1.33e-012.57e-01-2.58e+009.87e-032.15e-02-1.24e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
BRCAcg24776469chr2:173354620CGI:chr2:173354805-173355640promoter1.45e-013.66e-023.02e+002.51e-033.11e-031.08e-01
BRCAcg21583565chr2:173354608CGI:chr2:173354805-173355640promoter1.93e-013.77e-022.52e+001.17e-021.30e-021.55e-01

Top

Exon skipping events with PSI in TCGA for CDCA7

∗Please access ExonSkipDB for exon skipping annotation.
check buttonLandscape of exon skipping events across multiple cancer types.
AS event heatmap

check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

Top

RNA A-to-I editing events in TCGA for CDCA7

∗Please access CAeditome for RNA editing annotation.
check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

Top

Sex-biased TF-Gene network for CDCA7

check buttonTFs related to CDCA7.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
TF Gene
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
CHOLZNF879CDCA73.81e+009.80e-012.61e+003.83e-03Male-biased
DLBCZNF418CDCA72.87e+004.21e-033.99e+009.81e-01Female-biased
LAMLZNF334CDCA74.36e+009.81e-013.39e+007.93e-03Male-biased
PAADEMX1CDCA74.52e+009.81e-013.72e+001.20e-02Male-biased
PAADEMX2CDCA74.41e+009.81e-013.59e+001.06e-02Male-biased
PAADFOXF2CDCA74.55e+009.83e-013.74e+001.10e-02Male-biased
PAADHOXC10CDCA74.12e+009.82e-013.18e+005.64e-03Male-biased
PAADPOU6F2CDCA74.68e+009.88e-013.79e+007.23e-03Male-biased
PAADZNF334CDCA74.04e+009.86e-012.71e+007.13e-04Male-biased
PAADZNF418CDCA73.87e+009.81e-012.57e+008.41e-04Male-biased

check buttonCDCA7 related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

Top

Sex-biased RBP-ES network for CDCA7

check buttonRBPs related to ES in CDCA7.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
RBP ES
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
COADG3BP2exon_skip_3312659.29e+009.82e-018.99e+001.52e-02Male-biased

check buttonCDCA7 related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

Top

Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type
ENSG00000144354AC106037.2,hsa-mir-93,CDCA7Male-specific ceRNATCGA-HNSC
ENSG00000144354LINC01409,hsa-mir-93,CDCA7Male-specific ceRNATCGA-HNSC
ENSG00000144354AL022322.2,hsa-mir-93,CDCA7Male-specific ceRNATCGA-HNSC
ENSG00000144354AC004943.2,hsa-mir-93,CDCA7Male-specific ceRNATCGA-HNSC

Top

Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs17701274chr2:173443917:T:C-0.1407242144814490.0032342581374678LIHCFemale-baised eQTL
rs72946199chr2:177299036:T:C-0.112059145082720.0019232934061484KIRCFemale-baised eQTL
rs72948115chr2:177302358:C:T-0.112059145082720.0019232934061484KIRCFemale-baised eQTL
rs55945003chr2:177343779:C:T-0.1032662713079010.0059750702642873KIRCFemale-baised eQTL
rs2120687chr2:177174306:A:C-0.1111734217198570.0117496247944507KIRCFemale-baised eQTL
rs56239626chr2:177171622:G:A-0.1128619801034060.0173636076102542KIRCFemale-baised eQTL
rs3109082chr2:177155719:T:G-0.1057553872645470.0193155933662801KIRCFemale-baised eQTL
rs155087chr2:181476947:T:C--0.04551142495233380.0289374119397775LUADFemale-baised eQTL
rs155088chr2:181476990:C:G--0.04551142495233380.0289374119397775LUADFemale-baised eQTL
rs155090chr2:181477185:G:C--0.04551142495233380.0289374119397775LUADFemale-baised eQTL
rs155096chr2:181480662:A:G--0.04335850431208530.045187058312697LUADFemale-baised eQTL
rs155095chr2:181478551:A:G--0.04299672632507310.0455195890894011LUADFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs77607489chr2:169480335:T:A-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs12614103chr2:169482171:A:G-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs75246169chr2:169487436:T:C-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs116869010chr2:169487683:T:C-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs77749686chr2:169495149:T:C-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs115874575chr2:169497184:G:C-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs114452964chr2:169500083:C:G-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs12615476chr2:169501683:C:T-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs181495249chr2:169505191:G:C-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs189448631chr2:169505372:G:A-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs182027521chr2:169505686:C:T-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs186068899chr2:169505786:G:A-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs370773265chr2:169505900:C:G-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs142813498chr2:169506403:G:T-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs3754922chr2:169507725:T:G-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs114403621chr2:169508106:T:C-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs3769772chr2:169512185:T:C-0.1212502983260410.047269331792837LIHCMale-baised eQTL
rs78198178chr2:169493440:A:G-0.1210274462841270.0482406595827083LIHCMale-baised eQTL
rs114404270chr2:169495941:T:C-0.1210274462841270.0482406595827083LIHCMale-baised eQTL
rs190280661chr2:169496786:G:A-0.1210274462841270.0482406595827083LIHCMale-baised eQTL
rs74715514chr2:169497486:C:G-0.1210274462841270.0482406595827083LIHCMale-baised eQTL
rs80312049chr2:169500250:T:G-0.1210274462841270.0482406595827083LIHCMale-baised eQTL
rs116729322chr2:169502485:T:G-0.1210274462841270.0482406595827083LIHCMale-baised eQTL
rs58194973chr2:169503467:A:G-0.1210274462841270.0482406595827083LIHCMale-baised eQTL
rs7587839chr2:169503887:C:T-0.1210274462841270.0482406595827083LIHCMale-baised eQTL
rs183253343chr2:169506344:C:T-0.1210274462841270.0482406595827083LIHCMale-baised eQTL
rs17524024chr2:169508867:T:C-0.1210274462841270.0482406595827083LIHCMale-baised eQTL
rs75945667chr2:170202904:A:G-0.06804330274361630.0499249220157854LIHCMale-baised eQTL
rs7602862chr2:165267504:T:C-0.06459334279051420.0271673723391008LGGMale-baised eQTL
rs35513078chr2:165248177:A:G-0.06238837471474520.0400532879545251LGGMale-baised eQTL
rs4667799chr2:165233603:A:G-0.06133571828232010.046776315271646LGGMale-baised eQTL
rs12468801chr2:165246030:C:T-0.06133571828232010.046776315271646LGGMale-baised eQTL
rs11896706chr2:166136524:T:C-0.03186598406972120.0367425238003557KIRCMale-baised eQTL
rs11897944chr2:175630998:C:A-0.03723276232615150.0408399293467363KIRCMale-baised eQTL
rs2390319chr2:165964896:A:G-0.05200608448996640.00870202513346984LUADMale-baised eQTL
rs56269580chr2:165972379:G:C-0.05200608448996640.00870202513346984LUADMale-baised eQTL
rs10201659chr2:165977160:G:A-0.05095369619601680.0106668770658067LUADMale-baised eQTL
rs10166902chr2:165977302:T:G-0.05095369619601680.0106668770658067LUADMale-baised eQTL
rs28363818chr2:165959150:A:G-0.05028621904306670.015305115781878LUADMale-baised eQTL
rs76128279chr2:172446275:T:C-0.07168935617592290.0156361962474677LUADMale-baised eQTL
rs113283900chr2:170420012:A:G-0.0554629696491660.0157989826590201LUADMale-baised eQTL
rs10221583chr2:165957859:G:A-0.05033615030967880.0158025507472223LUADMale-baised eQTL
rs17607736chr2:170427218:C:T-0.05537993805349950.0159236665263194LUADMale-baised eQTL
rs60384579chr2:170415769:C:G-0.05565575260188330.0160871901034669LUADMale-baised eQTL
rs9711634chr2:172445372:G:A-0.06932905276271820.0175506268332602LUADMale-baised eQTL
rs4993283chr2:172445603:T:C-0.06932905276271820.0175506268332602LUADMale-baised eQTL
rs4993282chr2:172445628:G:A-0.06932905276271820.0175506268332602LUADMale-baised eQTL
rs4480959chr2:172445817:C:T-0.06932905276271820.0175506268332602LUADMale-baised eQTL
rs10197251chr2:172452682:C:A-0.06979394138290680.0190669355637319LUADMale-baised eQTL
rs75397932chr2:172446361:A:G-0.06940755851391040.0204408429418585LUADMale-baised eQTL
rs6737259chr2:175478576:T:G-0.04280162048418640.0209670115621892LUADMale-baised eQTL
rs1375180chr2:176502699:A:C-0.04113499972856210.0209968901071992LUADMale-baised eQTL
rs10930752chr2:176768076:G:T-0.03784230152657880.0214580606503992LUADMale-baised eQTL
rs994398chr2:166049259:C:G-0.05207783795378990.0230630316030751LUADMale-baised eQTL
rs12470105chr2:166049775:A:G-0.05207783795378990.0230630316030751LUADMale-baised eQTL
rs13408393chr2:176504050:G:A-0.03993011200809760.0244463592557111LUADMale-baised eQTL
rs13408200chr2:176504051:C:T-0.03993011200809760.0244463592557111LUADMale-baised eQTL
rs7568419chr2:176505791:A:C-0.03993011200809760.0244463592557111LUADMale-baised eQTL
rs16822821chr2:166057955:C:T-0.04702043578991820.0250236323796952LUADMale-baised eQTL
rs57251863chr2:175427217:C:T-0.04271520430705110.025074941049217LUADMale-baised eQTL
rs4668259chr2:170430014:T:G-0.05261628463474490.026928483379118LUADMale-baised eQTL
rs1370934chr2:170408317:T:C--0.06124131054037460.0284872662097339LUADMale-baised eQTL
rs16863187chr2:175443909:A:C-0.04210186076360150.0289520991284756LUADMale-baised eQTL
rs10460370chr2:175427132:T:C-0.04200529306445510.0297635943726259LUADMale-baised eQTL
rs58999795chr2:175434705:C:G-0.04202966824966540.0297913147563773LUADMale-baised eQTL
rs73973834chr2:175435283:T:C-0.04202966824966540.0297913147563773LUADMale-baised eQTL
rs73973835chr2:175435297:T:G-0.04202966824966540.0297913147563773LUADMale-baised eQTL
rs10497276chr2:166000490:C:A-0.05046899405361650.0323991594029569LUADMale-baised eQTL
rs16851356chr2:166004124:T:C-0.05046899405361650.0323991594029569LUADMale-baised eQTL
rs12464461chr2:170406200:A:C--0.04144885284251010.0362210865121014LUADMale-baised eQTL
rs4088148chr2:170406416:T:C--0.04144885284251010.0362210865121014LUADMale-baised eQTL
rs4893874chr2:176516057:G:A-0.03966168454461270.0380494724868796LUADMale-baised eQTL
rs16851327chr2:165985037:A:C-0.04931951949555820.0400930641735842LUADMale-baised eQTL
rs79907501chr2:165987175:C:G-0.04931951949555820.0400930641735842LUADMale-baised eQTL
rs10497275chr2:165990220:A:G-0.04931951949555820.0400930641735842LUADMale-baised eQTL
rs4243394chr2:176525139:A:G-0.03970627947578880.0402279400332859LUADMale-baised eQTL
rs143662035chr2:165975454:T:C-0.05019874915216570.0407301945393434LUADMale-baised eQTL
rs2217195chr2:165975554:A:T-0.05019874915216570.0407301945393434LUADMale-baised eQTL
rs57244097chr2:165948274:G:A-0.05131355454797750.042452593213002LUADMale-baised eQTL
rs6758766chr2:176765880:T:G-0.03542996558562150.0436220555257304LUADMale-baised eQTL
rs4600700chr2:176766136:G:T-0.03542996558562150.0436220555257304LUADMale-baised eQTL
rs11680819chr2:165956405:T:C-0.04990533431091780.048691811425368LUADMale-baised eQTL
rs12614431chr2:166031502:A:G-0.04948065874442320.0490980795302758LUADMale-baised eQTL
rs113164940chr2:169738337:C:T--0.08244861019155070.0283798247050443COADMale-baised eQTL
rs67500252chr2:169733592:G:A--0.08184487205308960.0290896275595639COADMale-baised eQTL
rs72891403chr2:169737391:C:T--0.08184487205308960.0290896275595639COADMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

Top

Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription
eQTM boxplot analysisGene ID: ENSG00000144354
CpG Site: cg21622202
Position to Gene: gene,CDS,UTR,exon,enhancer
Male Effect: -0.470126007442241
Female Effect: -

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type
cg21622202chr2:173359434gene,CDS,UTR,exon,enhancer-0.4701260074422412.69394788245075e-28-0.68905186893383039.670319431708808e-33LUAD

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

Top

Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

Top

Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

Top

Related disease information of CDCA7

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource
ENSG00000144354CDCA7C2931456Prostate cancer, familial1CTD_human
ENSG00000144354CDCA7C4310799IMMUNODEFICIENCY-CENTROMERIC INSTABILITY-FACIAL ANOMALIES SYNDROME 31CTD_human
ENSG00000144354CDCA7C4722327PROSTATE CANCER, HEREDITARY, 11CTD_human