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Center for Computational Systems Medicine
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Gene summary

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Gene structure and Gene expression level

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Sex-biased somatic mutation

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DNA methylation with beta values in gene

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Exon skipping events with PSI in TCGA

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RNA A-to-I editing events in TCGA

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Sex-biased TF-Gene network of gene

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Sex-biased RBP-ES network of gene

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Sex-biased CeRNA regulation of gene

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Sex-biased eQTL regulation of gene

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Sex-biased eQTM regulation of gene

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Sex-biased sQTL regulation of gene

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Sex-biased sQTM regulation of gene

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Related disease information of gene

Gene: ENSG00000143514

Summary for TP53BP2

check button Gene summary

Gene informationEnsembl ID

ENSG00000143514

Gene symbol

TP53BP2

Gene nametumor protein p53 binding protein 2
HGNC

12000

Entrez ID

7159

Gene typeprotein_coding
SynonymsTP53BP2|PPP1R13A|ASPP2|53BP2
UniProtAcc

Q13625


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

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Structure and expression level for TP53BP2

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

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Sex-biased somatic mutation for TP53BP2

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

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DNA methylation with beta values for TP53BP2

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
LUSCcg02526551chr1:223844093CGI:chr1:223845383-223846561promoter,gene body7.27e-016.10e-012.85e+004.38e-037.39e-031.18e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
KIRPcg02526551chr1:223844093CGI:chr1:223845383-223846561promoter,gene body6.78e-018.84e-01-2.11e+003.53e-023.93e-02-2.06e-01

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Exon skipping events with PSI in TCGA for TP53BP2

∗Please access ExonSkipDB for exon skipping annotation.
check buttonLandscape of exon skipping events across multiple cancer types.
AS event heatmap

check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

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RNA A-to-I editing events in TCGA for TP53BP2

∗Please access CAeditome for RNA editing annotation.
check buttonLandscape of RNA editing events across multiple cancer types.
ED heatmap

check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre
STADTP53BP2-005chr1_223790742_-8.13e-016.53e-011.99e+004.63e-024.96e-021.60e-01

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

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Sex-biased TF-Gene network for TP53BP2

check buttonTFs related to TP53BP2.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
TF Gene
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
MESOZNF418TP53BP22.43e+002.54e-034.10e+009.85e-01Female-biased
PAADBARX1TP53BP24.09e+009.85e-012.93e+001.77e-03Male-biased
PAADBARX2TP53BP24.45e+009.92e-013.17e+001.00e-03Male-biased
PAADDMRT2TP53BP24.56e+009.93e-013.31e+001.18e-03Male-biased
PAADDMRT3TP53BP24.47e+009.91e-013.31e+001.84e-03Male-biased
PAADDMRTA1TP53BP24.45e+009.92e-013.19e+001.06e-03Male-biased
PAADDMRTA2TP53BP24.50e+009.92e-013.31e+001.62e-03Male-biased
PAADFOXD3TP53BP23.99e+009.85e-012.43e+002.16e-04Male-biased
PAADFOXE1TP53BP23.84e+009.81e-012.57e+009.51e-04Male-biased
PAADFOXO1TP53BP24.04e+009.83e-013.01e+003.38e-03Male-biased
PAADFOXP1TP53BP24.18e+009.84e-013.21e+004.89e-03Male-biased
PAADHOXB7TP53BP24.00e+009.83e-012.91e+002.65e-03Male-biased
PAADHOXB8TP53BP24.25e+009.85e-013.28e+004.85e-03Male-biased
PAADMEIS1TP53BP24.24e+009.85e-013.28e+005.11e-03Male-biased
PAADMYNNTP53BP24.03e+009.85e-012.81e+001.25e-03Male-biased
PAADNKX3-1TP53BP24.32e+009.91e-012.89e+004.41e-04Male-biased
PAADPOU1F1TP53BP24.23e+009.84e-013.28e+005.58e-03Male-biased
PAADPOU4F3TP53BP24.11e+009.86e-012.93e+001.66e-03Male-biased
PAADPOU5F1BTP53BP24.18e+009.87e-013.00e+001.67e-03Male-biased
PAADSOX10TP53BP24.02e+009.84e-012.87e+001.88e-03Male-biased
PAADSOX8TP53BP24.01e+009.84e-012.86e+001.88e-03Male-biased
PAADSOX9TP53BP24.08e+009.86e-012.81e+009.81e-04Male-biased
PAADZKSCAN2TP53BP24.01e+009.85e-012.74e+009.84e-04Male-biased
PAADZNF232TP53BP24.46e+009.87e-013.51e+005.45e-03Male-biased
PAADZNF25TP53BP23.91e+009.83e-012.22e+009.73e-05Male-biased
PAADZNF250TP53BP23.99e+009.82e-012.95e+003.32e-03Male-biased
PAADZNF317TP53BP23.94e+009.81e-012.86e+002.80e-03Male-biased
PAADZNF33BTP53BP24.04e+009.86e-012.71e+007.21e-04Male-biased
PAADZNF418TP53BP24.30e+009.91e-012.26e+001.27e-05Male-biased
PAADZNF580TP53BP24.32e+009.90e-013.00e+007.95e-04Male-biased
PAADZNF716TP53BP23.90e+009.82e-012.64e+001.05e-03Male-biased
PAADZNF879TP53BP23.82e+009.81e-012.19e+001.40e-04Male-biased
SARCBARX2TP53BP24.68e+009.82e-014.16e+001.27e-02Male-biased
SARCDMRT2TP53BP24.80e+009.84e-014.26e+001.15e-02Male-biased
SARCDMRT3TP53BP24.71e+009.84e-014.17e+001.11e-02Male-biased
SARCDMRTA2TP53BP24.71e+009.80e-014.20e+001.46e-02Male-biased
SARCFOXD3TP53BP24.25e+009.86e-013.51e+003.39e-03Male-biased
SARCFOXO1TP53BP24.40e+009.86e-013.75e+005.86e-03Male-biased
SARCMEIS1TP53BP24.50e+009.84e-013.92e+008.93e-03Male-biased
SARCNKX3-1TP53BP24.59e+009.83e-014.05e+001.11e-02Male-biased
SARCPOU4F3TP53BP24.51e+009.90e-013.77e+003.26e-03Male-biased
SARCPOU5F1BTP53BP24.39e+009.83e-013.79e+007.94e-03Male-biased
SARCSOX9TP53BP24.33e+009.84e-013.71e+006.79e-03Male-biased
SARCTLX3TP53BP25.44e+009.90e-014.84e+007.95e-03Male-biased
SARCZKSCAN2TP53BP24.25e+009.81e-013.66e+008.06e-03Male-biased
SARCZNF232TP53BP24.64e+009.85e-014.07e+009.41e-03Male-biased
SARCZNF25TP53BP24.25e+009.81e-013.67e+008.34e-03Male-biased
SARCZNF33BTP53BP24.29e+009.86e-013.59e+004.17e-03Male-biased
SARCZNF418TP53BP24.35e+009.83e-013.74e+007.49e-03Male-biased

check buttonTP53BP2 related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

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Sex-biased RBP-ES network for TP53BP2

check buttonRBPs related to ES in TP53BP2.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
RBP ES
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
ACCYBX2exon_skip_373201.47e+019.94e-011.42e+015.98e-03Male-biased
UVMYBX2exon_skip_373201.42e+011.00e+001.36e+012.16e-04Male-biased
UVMZFP36exon_skip_373187.36e+009.32e-037.67e+009.81e-01Female-biased
COADPPRC1exon_skip_373181.28e+019.96e-011.24e+013.87e-03Male-biased
DLBCYBX2exon_skip_373201.40e+011.76e-041.48e+011.00e+00Female-biased
KIRPYBX2exon_skip_373201.39e+014.08e-031.44e+019.96e-01Female-biased
ESCAYBX2exon_skip_373201.37e+014.26e-031.43e+019.96e-01Female-biased
MESOYBX2exon_skip_373201.36e+011.42e-041.44e+011.00e+00Female-biased
GBMYBX2exon_skip_373201.37e+016.97e-041.43e+019.99e-01Female-biased
KIRCYB-1exon_skip_373297.26e+005.93e-037.62e+009.84e-01Female-biased
KICHPPRC1exon_skip_373181.25e+019.97e-011.20e+012.53e-03Male-biased
BLCAZFP36exon_skip_373187.05e+007.84e-037.43e+009.81e-01Female-biased
HNSCFXR2exon_skip_373247.08e+009.84e-016.62e+003.20e-03Male-biased
HNSCYBX2exon_skip_373201.39e+013.72e-031.43e+019.96e-01Female-biased
SARCYBX2exon_skip_373201.38e+013.39e-031.43e+019.96e-01Female-biased

check buttonTP53BP2 related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

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Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

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Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs2030078chr1:219968291:C:G-0.1038367454130430.0225842590876371BLCAFemale-baised eQTL
rs12409750chr1:219965176:T:G-0.1038684907549010.0243451573423825BLCAFemale-baised eQTL
rs2027504chr1:219967372:T:C-0.1021232018211320.0308361998376095BLCAFemale-baised eQTL
rs11118477chr1:219967727:T:C-0.1021232018211320.0308361998376095BLCAFemale-baised eQTL
rs2030079chr1:219968191:A:G-0.1020868417044650.0309594073155868BLCAFemale-baised eQTL
rs28473426chr1:219956483:A:C-0.1008899924285840.0327426196809574BLCAFemale-baised eQTL
rs4385715chr1:219963214:A:C-0.1007797549289620.0331890992897367BLCAFemale-baised eQTL
rs11811258chr1:219964391:A:G-0.1007797549289620.0331890992897367BLCAFemale-baised eQTL
rs1982986chr1:219972242:C:T-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs1982984chr1:219972313:C:T-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs34309222chr1:219972604:T:C-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs949866chr1:219973001:A:C-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs10779391chr1:219974003:G:A-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs12045445chr1:219974311:G:A-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs12126940chr1:219974482:C:A-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs7521388chr1:219974748:C:T-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs7535650chr1:219974911:T:C-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs7521682chr1:219975010:C:T-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs7535767chr1:219975044:T:A-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs7535773chr1:219975058:T:C-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs1846255chr1:219975447:T:C-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs1846254chr1:219975458:T:C-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs1498394chr1:219975837:T:C-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs201242785chr1:219975845:T:A-0.1022380088357690.0368409712837351BLCAFemale-baised eQTL
rs12049352chr1:219970992:A:C-0.1009832296615960.038986361256287BLCAFemale-baised eQTL
rs1061248chr1:219968681:C:T-0.1009632145278140.0390833125723766BLCAFemale-baised eQTL
rs1061242chr1:219968728:C:T-0.1009632145278140.0390833125723766BLCAFemale-baised eQTL
rs2270712chr1:219969270:C:T-0.1009632145278140.0390833125723766BLCAFemale-baised eQTL
rs3816993chr1:219969329:T:C-0.1009632145278140.0390833125723766BLCAFemale-baised eQTL
rs12098052chr1:219969600:T:C-0.1009632145278140.0390833125723766BLCAFemale-baised eQTL
rs1874814chr1:219969884:T:A-0.1009632145278140.0390833125723766BLCAFemale-baised eQTL
rs1874813chr1:219969967:G:A-0.1009632145278140.0390833125723766BLCAFemale-baised eQTL
rs1874812chr1:219970141:C:T-0.1009632145278140.0390833125723766BLCAFemale-baised eQTL
rs12726890chr1:219970345:T:C-0.1009632145278140.0390833125723766BLCAFemale-baised eQTL
rs12032866chr1:219970818:C:T-0.1009632145278140.0390833125723766BLCAFemale-baised eQTL
rs12032898chr1:219970881:C:T-0.1009632145278140.0390833125723766BLCAFemale-baised eQTL
rs4536003chr1:219971640:A:T-0.1009632145278140.0390833125723766BLCAFemale-baised eQTL
rs7536968chr1:219976532:A:G-0.1011842181640120.0415776730571969BLCAFemale-baised eQTL
rs7527659chr1:219976664:C:G-0.1011842181640120.0415776730571969BLCAFemale-baised eQTL
rs7527749chr1:219976737:C:G-0.1011842181640120.0415776730571969BLCAFemale-baised eQTL
rs2270710chr1:219978350:A:G-0.1011809323575760.0415986018225665BLCAFemale-baised eQTL
rs11118474chr1:219962334:A:G-0.0996924880956890.0425987198602291BLCAFemale-baised eQTL
rs11118476chr1:219966396:C:T-0.0996924880956890.0425987198602291BLCAFemale-baised eQTL
rs10746394chr1:219963899:A:G-0.0991793183445960.0432880443711437BLCAFemale-baised eQTL
rs7553236chr1:219978302:G:A-0.09969471352634520.045015762806379BLCAFemale-baised eQTL
rs3816994chr1:219968509:T:G-0.100153685191930.0472897130452921BLCAFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs265121chr1:217423360:G:T-0.06770806843657390.0465754302646819BLCAMale-baised eQTL
rs4536002chr1:219729660:A:G--0.08747116057400940.031988233566539LUADMale-baised eQTL
rs1766403chr1:219749092:C:T--0.08276601575233710.0375565333734582LUADMale-baised eQTL
rs9729514chr1:219727713:A:G--0.08325936652989080.0416858361011955LUADMale-baised eQTL
rs10746391chr1:219735295:A:C--0.08522390942305130.0431719546522252LUADMale-baised eQTL
rs6669717chr1:219739427:C:T--0.08522390942305130.0431719546522252LUADMale-baised eQTL
rs2795467chr1:232794311:A:G-0.05847460933151130.00608412560345466COADMale-baised eQTL
rs2814509chr1:232782860:T:C-0.05975862327891660.00775772395177272COADMale-baised eQTL
rs4846288chr1:219234794:T:C--0.05911464590222270.0196242530965151COADMale-baised eQTL
rs869543chr1:219242937:A:C--0.05767438975488470.0227203689608473COADMale-baised eQTL
rs4846542chr1:219257725:G:A--0.05767438975488470.0227203689608473COADMale-baised eQTL
rs2105465chr1:219262143:C:G--0.05767438975488470.0227203689608473COADMale-baised eQTL
rs17049139chr1:219198816:G:A-0.05999428428956370.0240165046067922COADMale-baised eQTL
rs12125703chr1:219205370:A:C-0.05999428428956370.0240165046067922COADMale-baised eQTL
rs61824005chr1:223777629:C:T-0.07607336612806580.0262844900195768COADMale-baised eQTL
rs12137855chr1:219275036:C:T-0.06101663703894320.0264995829021246COADMale-baised eQTL
rs61836091chr1:219275396:G:A-0.06101663703894320.0264995829021246COADMale-baised eQTL
rs12088254chr1:223779649:C:T-0.07260939415602930.0286359025981567COADMale-baised eQTL
rs10863436chr1:219194709:A:G--0.05455904121338930.032303905282355COADMale-baised eQTL
rs4846537chr1:219204067:G:T--0.05571316177821710.0324436122956886COADMale-baised eQTL
rs113720073chr1:223777989:T:C-0.06660708013859070.0442684156944995COADMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

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Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

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Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

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Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

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Related disease information of TP53BP2

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource
ENSG00000143514TP53BP2C0006142Malignant neoplasm of breast1CTD_human
ENSG00000143514TP53BP2C0027626Neoplasm Invasiveness1CTD_human
ENSG00000143514TP53BP2C0206692Carcinoma, Lobular1CTD_human
ENSG00000143514TP53BP2C0678222Breast Carcinoma1CTD_human
ENSG00000143514TP53BP2C1257931Mammary Neoplasms, Human1CTD_human
ENSG00000143514TP53BP2C1458155Mammary Neoplasms1CTD_human
ENSG00000143514TP53BP2C4704874Mammary Carcinoma, Human1CTD_human