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Center for Computational Systems Medicine
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Gene summary

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Gene structure and Gene expression level

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Sex-biased somatic mutation

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DNA methylation with beta values in gene

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Exon skipping events with PSI in TCGA

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RNA A-to-I editing events in TCGA

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Sex-biased TF-Gene network of gene

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Sex-biased RBP-ES network of gene

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Sex-biased CeRNA regulation of gene

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Sex-biased eQTL regulation of gene

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Sex-biased eQTM regulation of gene

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Sex-biased sQTL regulation of gene

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Sex-biased sQTM regulation of gene

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Related disease information of gene

Gene: ENSG00000142230

Summary for SAE1

check button Gene summary

Gene informationEnsembl ID

ENSG00000142230

Gene symbol

SAE1

Gene nameSUMO1 activating enzyme subunit 1
HGNC

30660

Entrez ID

10055

Gene typeprotein_coding
SynonymsSAE1|AOS1|FLJ3091|Sua1
UniProtAcc

Q9UBE0


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

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Structure and expression level for SAE1

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

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Sex-biased somatic mutation for SAE1

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

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DNA methylation with beta values for SAE1

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
DLBCcg24181914chr19:47114044CGI:chr19:47113417-47113844promoter,gene body1.93e-013.03e-01-2.11e+003.48e-024.46e-02-1.10e-01

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
HNSCcg09137630chr19:47114760CGI:chr19:47113417-47113844promoter,gene body2.20e-013.43e-01-4.64e+003.49e-061.60e-05-1.24e-01
LUSCcg09137630chr19:47114760CGI:chr19:47113417-47113844promoter,gene body2.65e-015.58e-01-3.87e+001.08e-047.20e-04-2.94e-01
ESCAcg09137630chr19:47114760CGI:chr19:47113417-47113844promoter,gene body1.67e-014.01e-01-2.18e+002.90e-024.34e-02-2.34e-01
CHOLcg09137630chr19:47114760CGI:chr19:47113417-47113844promoter,gene body2.98e-015.32e-01-2.29e+002.23e-023.24e-02-2.34e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
BRCAcg09137630chr19:47114760CGI:chr19:47113417-47113844promoter,gene body2.26e-013.96e-01-1.15e+018.76e-311.41e-29-1.70e-01
KIRCcg09137630chr19:47114760CGI:chr19:47113417-47113844promoter,gene body1.73e-012.74e-01-2.71e+006.78e-031.33e-02-1.00e-01
LIHCcg09137630chr19:47114760CGI:chr19:47113417-47113844promoter,gene body3.66e-015.86e-01-3.46e+005.47e-041.41e-03-2.19e-01

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Exon skipping events with PSI in TCGA for SAE1

∗Please access ExonSkipDB for exon skipping annotation.
check buttonLandscape of exon skipping events across multiple cancer types.
AS event heatmap

check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

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RNA A-to-I editing events in TCGA for SAE1

∗Please access CAeditome for RNA editing annotation.
check buttonLandscape of RNA editing events across multiple cancer types.
ED heatmap

check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre
STADSAE1-005chr19_47191896_+3.11e-014.56e-01-2.53e+001.14e-024.96e-02-1.45e-01

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

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Sex-biased TF-Gene network for SAE1

check buttonTFs related to SAE1.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType

check buttonSAE1 related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

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Sex-biased RBP-ES network for SAE1

check buttonRBPs related to ES in SAE1.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
RBP ES
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
LUSCCNOT4exon_skip_3086301.03e+019.93e-019.86e+005.61e-03Male-biased

check buttonSAE1 related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

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Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

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Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs385349chr19:55838881:C:A-0.2317606723772630.0208527993638196GBMFemale-baised eQTL
rs373879chr19:55839707:A:G-0.2317606723772630.0208527993638196GBMFemale-baised eQTL
rs412812chr19:55842652:C:G-0.2317606723772630.0208527993638196GBMFemale-baised eQTL
rs8106416chr19:53685201:T:C-0.04897752570379120.0237083060998244LUADFemale-baised eQTL
rs383133chr19:43962944:T:G-0.05815681849056640.0293135845496426LUADFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs80252508chr19:52965435:A:C-0.1021598903291870.0190364210844273THCAMale-baised eQTL
rs2616943chr19:55830208:G:A--0.0595883022772170.0163892338898384LGGMale-baised eQTL
rs12983624chr19:51678028:T:C--0.09738906843316430.0301265753500275LGGMale-baised eQTL
rs347518chr19:43768036:G:A--0.05416674981005580.0043361448190117KIRCMale-baised eQTL
rs11083506chr19:39110997:G:A-0.03523731210353060.00783596564140454KIRCMale-baised eQTL
rs7258793chr19:39111268:C:G-0.03523731210353060.00783596564140454KIRCMale-baised eQTL
rs1865027chr19:39111823:G:T-0.03496455690592980.00908160662299595KIRCMale-baised eQTL
rs4803201chr19:39110552:C:T-0.03412960112319820.0124355954573392KIRCMale-baised eQTL
rs8108108chr19:39101663:C:T-0.03248228919554420.0204379527687293KIRCMale-baised eQTL
rs692364chr19:39115242:C:A-0.03155596456738310.0216048912385563KIRCMale-baised eQTL
rs12978685chr19:39121683:C:T-0.03245377541940360.0240698305121433KIRCMale-baised eQTL
rs774903chr19:39121926:C:T-0.03069534900715410.030873209512825KIRCMale-baised eQTL
rs149765705chr19:48039838:C:T-0.0444254675711870.0340049640690185KIRCMale-baised eQTL
rs555132chr19:39122666:G:A-0.03042989392813960.0340502608455527KIRCMale-baised eQTL
rs111784716chr19:48037457:G:A-0.04684156130479060.0343489898881251KIRCMale-baised eQTL
rs774902chr19:39121916:C:T-0.03040713891624590.0351139711166592KIRCMale-baised eQTL
rs9749593chr19:39119112:G:A-0.03025387141729920.0356500929368611KIRCMale-baised eQTL
rs476508chr19:39121535:C:G-0.03025387141729920.0356500929368611KIRCMale-baised eQTL
rs79480967chr19:48036305:C:T-0.04618489423809080.0393430380057834KIRCMale-baised eQTL
rs376591693chr19:48040901:A:G-0.04390457580599910.0414002552789004KIRCMale-baised eQTL
rs34862923chr19:48040649:G:C-0.04376359030010770.0418559225968695KIRCMale-baised eQTL
rs117861443chr19:48040916:G:C-0.04372396454163910.0434300012240376KIRCMale-baised eQTL
rs79135781chr19:48040983:A:C-0.04372396454163910.0434300012240376KIRCMale-baised eQTL
rs78381043chr19:48040999:G:A-0.04372396454163910.0434300012240376KIRCMale-baised eQTL
rs113419610chr19:48041054:T:A-0.04372396454163910.0434300012240376KIRCMale-baised eQTL
rs112270137chr19:48041087:A:G-0.04372396454163910.0434300012240376KIRCMale-baised eQTL
rs76881010chr19:48036688:G:A-0.04544826204311940.0444186247613039KIRCMale-baised eQTL
rs736994chr19:57175987:G:A--0.05504068497381850.00919890526970123COADMale-baised eQTL
rs999135chr19:57185017:G:A--0.05296505201492060.0124773757160217COADMale-baised eQTL
rs11669518chr19:57180338:T:C--0.05193871868423940.0174179568377839COADMale-baised eQTL
rs4801204chr19:57184686:A:G--0.05176101979330960.0190081356483199COADMale-baised eQTL
rs9807896chr19:57206082:A:G--0.05357086182046190.019424549087528COADMale-baised eQTL
rs2864096chr19:51488518:T:C--0.06078275086953140.0260455382857571COADMale-baised eQTL
rs75205204chr19:53097498:T:A--0.07560553190029580.0362659090461029COADMale-baised eQTL
rs77949198chr19:53097499:G:T--0.07560553190029580.0362659090461029COADMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

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Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription
eQTM boxplot analysisGene ID: ENSG00000142230
CpG Site: cg13387235
Position to Gene: gene
Male Effect: -
Female Effect: -0.366706011172976

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type
cg13387235chr19:47130507gene-0.3667060111729763.20675356147578e-05-0.3221095303348321.446488567773588e-07LUAD

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

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Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

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Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

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Related disease information of SAE1

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource