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Center for Computational Systems Medicine
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Gene summary

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Gene structure and Gene expression level

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Sex-biased somatic mutation

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DNA methylation with beta values in gene

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Exon skipping events with PSI in TCGA

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RNA A-to-I editing events in TCGA

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Sex-biased TF-Gene network of gene

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Sex-biased RBP-ES network of gene

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Sex-biased CeRNA regulation of gene

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Sex-biased eQTL regulation of gene

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Sex-biased eQTM regulation of gene

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Sex-biased sQTL regulation of gene

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Sex-biased sQTM regulation of gene

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Related disease information of gene

Gene: ENSG00000133636

Summary for NTS

check button Gene summary

Gene informationEnsembl ID

ENSG00000133636

Gene symbol

NTS

Gene nameneurotensin
HGNC

8038

Entrez ID

4922

Gene typeprotein_coding
SynonymsNTS|
UniProtAcc

P30990


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

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Structure and expression level for NTS

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
NTS1.38e+02-5.23e+001.19e+00-4.38e+001.17e-054.04e-04BRCA
NTS4.64e+022.42e+002.83e-018.54e+001.36e-176.40e-15LUAD
NTS1.52e+01-1.03e+002.62e-01-3.92e+008.68e-057.25e-03LGG
NTS2.56e+032.13e+003.52e-016.05e+001.45e-092.02e-07HNSC
NTS5.68e+011.59e+002.71e-015.89e+003.96e-091.86e-06COAD
NTS1.04e+02-2.07e+002.91e-01-7.09e+001.32e-127.89e-10BLCA
NTS1.84e+02-2.24e+002.67e-01-8.37e+005.69e-174.54e-14STAD
NTS3.32e+032.62e+007.36e-013.56e+003.75e-043.54e-02ESCA
NTS3.09e+02-3.64e+007.77e-01-4.69e+002.78e-064.96e-04ACC

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
NTS9.06e+01-1.02e+002.91e-01-3.51e+004.53e-047.24e-04KIRC
NTS3.01e+032.70e+006.40e-014.20e+002.30e-056.90e-05HNSC
NTS3.46e+036.44e+001.22e+005.29e+001.23e-074.15e-06ESCA

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

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Sex-biased somatic mutation for NTS

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

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DNA methylation with beta values for NTS

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
SARCcg04916911chr12:85874376CGI:chr12:85280100-85280922UTR,promoter,exon,gene body2.72e-011.71e-012.78e+005.43e-031.22e-021.02e-01

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
LIHCcg08888956chr12:85874061CGI:chr12:85280100-85280922promoter2.30e-014.03e-01-5.88e+004.07e-093.88e-08-1.73e-01
CHOLcg08888956chr12:85874061CGI:chr12:85280100-85280922promoter6.62e-014.17e-012.88e+004.04e-031.47e-022.45e-01
CHOLcg04916911chr12:85874376CGI:chr12:85280100-85280922UTR,promoter,exon,gene body4.71e-011.55e-012.58e+009.87e-032.15e-023.16e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

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Exon skipping events with PSI in TCGA for NTS

∗Please access ExonSkipDB for exon skipping annotation.
check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

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RNA A-to-I editing events in TCGA for NTS

∗Please access CAeditome for RNA editing annotation.
check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

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Sex-biased TF-Gene network for NTS

check buttonTFs related to NTS.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
TF Gene
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
BRCAZNF235NTS2.82e+004.42e-034.29e+009.81e-01Female-biased
CHOLBHLHE22NTS5.80e+009.81e-014.96e+001.76e-02Male-biased
CHOLDMRT2NTS5.01e+009.94e-013.79e+003.91e-03Male-biased
CHOLEN1NTS5.30e+009.88e-014.33e+001.04e-02Male-biased
CHOLHOXB7NTS4.86e+009.90e-013.80e+007.34e-03Male-biased
CHOLHOXB8NTS5.11e+009.88e-014.11e+009.45e-03Male-biased
CHOLNEUROD1NTS5.23e+009.91e-014.17e+007.13e-03Male-biased
CHOLNEUROG1NTS6.22e+009.81e-015.40e+001.83e-02Male-biased
CHOLNEUROG2NTS6.10e+009.80e-015.28e+001.90e-02Male-biased
CHOLONECUT3NTS4.91e+009.93e-013.69e+003.87e-03Male-biased
CHOLSOX18NTS4.93e+009.91e-013.84e+006.37e-03Male-biased
CHOLSOX5NTS5.26e+009.84e-014.38e+001.46e-02Male-biased
CHOLTBX19NTS5.73e+009.83e-014.86e+001.56e-02Male-biased
CHOLTEAD1NTS4.61e+009.83e-013.69e+001.24e-02Male-biased
CHOLZNF334NTS4.13e+009.88e-012.82e+002.48e-03Male-biased
CHOLZNF35NTS4.23e+009.87e-013.07e+004.65e-03Male-biased
CHOLZNF584NTS4.44e+009.87e-013.38e+007.07e-03Male-biased
CHOLZNF79NTS4.05e+009.85e-012.87e+004.14e-03Male-biased
MESODMRT2NTS4.82e+009.82e-013.71e+001.35e-02Male-biased
MESOZNF334NTS3.99e+009.82e-012.42e+002.75e-03Male-biased
MESOZNF35NTS4.07e+009.81e-012.72e+006.05e-03Male-biased
PCPGDMRT2NTS4.85e+009.92e-013.83e+003.74e-03Male-biased
PCPGEN1NTS5.20e+009.86e-014.42e+001.15e-02Male-biased
PCPGHOXB7NTS4.66e+009.82e-013.90e+001.20e-02Male-biased
PCPGHOXB8NTS4.82e+009.82e-014.09e+001.40e-02Male-biased
PCPGHSF5NTS5.64e+009.82e-014.94e+001.66e-02Male-biased
PCPGNEUROD1NTS5.10e+009.83e-014.38e+001.46e-02Male-biased
PCPGONECUT3NTS4.73e+009.87e-013.86e+007.60e-03Male-biased
PCPGSOX18NTS4.56e+009.85e-013.73e+008.73e-03Male-biased
PCPGSOX5NTS5.13e+009.85e-014.38e+001.24e-02Male-biased
PCPGZNF584NTS4.18e+009.81e-013.29e+006.55e-03Male-biased

check buttonNTS related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

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Sex-biased RBP-ES network for NTS

check buttonRBPs related to ES in NTS.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType

check buttonNTS related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

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Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type
ENSG00000133636FZD10-AS1,hsa-mir-202,NTSMale-specific ceRNATCGA-KIRP

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Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs12300367chr12:77823857:A:G-0.2048404709897460.00449910463476449READFemale-baised eQTL
rs1703098chr12:82893747:T:A-0.2433486712053392.87445862751193e-07PAADFemale-baised eQTL
rs10777302chr12:91415664:A:G--0.2047140146332273.63362805971608e-05PAADFemale-baised eQTL
rs11114165chr12:79545569:C:G-0.1773832050716860.000815629753625966PAADFemale-baised eQTL
rs12300306chr12:79555853:A:G-0.1773832050716860.000815629753625966PAADFemale-baised eQTL
rs75460553chr12:75894845:G:A-0.1840693214613180.0016360574860527PAADFemale-baised eQTL
rs2491339chr12:79713113:T:G-0.1700063910157750.00199326202459369PAADFemale-baised eQTL
rs6539473chr12:79769834:T:C-0.1806085103505330.00243273506397431PAADFemale-baised eQTL
rs2369464chr12:77040908:A:C-0.167358017944180.00276779915393238PAADFemale-baised eQTL
rs7302437chr12:85896084:C:T-0.1599150012331180.00418003998544343PAADFemale-baised eQTL
rs73378166chr12:85896488:T:A-0.1599150012331180.00418003998544343PAADFemale-baised eQTL
rs1379921chr12:91378580:T:C--0.1483271647302990.00720559231990735PAADFemale-baised eQTL
rs7310696chr12:91387543:C:T--0.1483271647302990.00720559231990735PAADFemale-baised eQTL
rs2131383chr12:91395879:C:G--0.1483271647302990.00720559231990735PAADFemale-baised eQTL
rs1492945chr12:91403615:T:C--0.1483271647302990.00720559231990735PAADFemale-baised eQTL
rs6539472chr12:79769748:G:A-0.1658858930293420.00755700184107935PAADFemale-baised eQTL
rs7952872chr12:79752068:C:A--0.1657443714907530.0077971348269381PAADFemale-baised eQTL
rs2998416chr12:79753236:A:G--0.1657443714907530.0077971348269381PAADFemale-baised eQTL
rs7134915chr12:85928195:C:A-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs11117109chr12:85929201:C:T-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs7960313chr12:85929477:C:T-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs2044618chr12:85930652:A:C-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs2044619chr12:85930798:A:G-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs11117112chr12:85935074:T:C-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs11117117chr12:85939408:G:T-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs10863117chr12:85941664:C:A-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs11117121chr12:85943003:A:C-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs11117123chr12:85943994:A:G-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs10863119chr12:85947304:G:A-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs11117125chr12:85948402:T:C-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs1448093chr12:85949597:T:C-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs1584367chr12:85950363:G:T-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs11117128chr12:85954094:G:A-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs75879590chr12:85954754:G:T-0.1496184380582930.00934413671512895PAADFemale-baised eQTL
rs7294874chr12:77143985:A:C-0.1453461346119140.0102475265293986PAADFemale-baised eQTL
rs7301204chr12:82852353:G:C-0.1333448746197770.0156015990608614PAADFemale-baised eQTL
rs2491342chr12:79761594:T:C--0.1533152341548380.0177671558699337PAADFemale-baised eQTL
rs7135958chr12:88539967:G:T--0.1409739402545230.0179793509600677PAADFemale-baised eQTL
rs3782176chr12:88545356:A:G--0.1409739402545230.0179793509600677PAADFemale-baised eQTL
rs1492347chr12:88532196:T:C--0.1410900975966980.0185212923631679PAADFemale-baised eQTL
rs4083220chr12:79701402:C:T-0.1359297858849990.0219695254472751PAADFemale-baised eQTL
rs7136806chr12:79709990:A:C-0.1358899830546880.0224278328250439PAADFemale-baised eQTL
rs2463171chr12:79712543:G:A-0.1358899830546880.0224278328250439PAADFemale-baised eQTL
rs7969188chr12:88530290:C:G--0.1331491934810150.0306787968880248PAADFemale-baised eQTL
rs7964695chr12:88541852:G:T--0.1331491934810150.0306787968880248PAADFemale-baised eQTL
rs3995243chr12:79705130:T:C-0.128269690361420.0366886793540504PAADFemale-baised eQTL
rs17019660chr12:91879162:A:T-0.1161533751792360.0397817913976433PAADFemale-baised eQTL
rs12309087chr12:94759582:T:C-0.1242905494471290.0447886404929473PAADFemale-baised eQTL
rs10777125chr12:88522058:G:A--0.1267077701491070.0464719161527035PAADFemale-baised eQTL
rs79032164chr12:92501435:G:A-0.2002022751672010.0331384053974358HNSCFemale-baised eQTL
rs12227617chr12:83458765:C:T-0.1541273454303690.0135233662307884LIHCFemale-baised eQTL
rs11115745chr12:83349677:C:A-0.1427560853519920.0279845181015766LIHCFemale-baised eQTL
rs11115746chr12:83353367:C:T-0.1427560853519920.0279845181015766LIHCFemale-baised eQTL
rs12230326chr12:83446319:C:A-0.1426875548184330.0283411183520984LIHCFemale-baised eQTL
rs2248356chr12:92900209:T:A--0.1222206116437830.000287892645571927STADFemale-baised eQTL
rs71452175chr12:87268828:C:T-0.08118239161024090.0249948408788247STADFemale-baised eQTL
rs71452181chr12:87297868:G:A-0.07589818309923370.0424415406833525STADFemale-baised eQTL
rs7302170chr12:81096803:T:C-0.1419940126288430.0463113773134695STADFemale-baised eQTL
rs78711843chr12:95798998:A:G-0.05974784524954496.2590807522418e-05LUADFemale-baised eQTL
rs2131383chr12:91395879:C:G--0.04067051187327540.00520391077638968LUADFemale-baised eQTL
rs11610271chr12:87526445:C:T-0.0296540694113410.0475420563362416LUADFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs2056331chr12:89659578:T:C--0.1818848331562541.59650593486452e-05READMale-baised eQTL
rs11115444chr12:82820939:G:A-0.1242418127855740.0127906557817143PAADMale-baised eQTL
rs10862513chr12:82820396:A:G-0.1179993084276480.021557881036599PAADMale-baised eQTL
rs10862512chr12:82812563:T:C-0.1122707847488630.0344091394212436PAADMale-baised eQTL
rs11115434chr12:82806414:C:T-0.1124549766862950.0345738578864145PAADMale-baised eQTL
rs201335759chr12:80270058:A:C-0.08159188360953690.00777315657939379LUADMale-baised eQTL
rs17195772chr12:77831406:C:A-0.03881656977202990.0421965601304784LUADMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

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Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription
eQTM boxplot analysisGene ID: ENSG00000133636
CpG Site: cg08888956
Position to Gene: promoter
Male Effect: -0.162188746997926
Female Effect: -

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type
cg08888956chr12:85874061promoter-0.1621887469979264.95446389723e-09-0.441044761411676374.96671094181897e-12LUAD

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

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Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

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Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

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Related disease information of NTS

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource
ENSG00000133636NTSC0001973Alcoholic Intoxication, Chronic2PSYGENET
ENSG00000133636NTSC0007370Catalepsy1CTD_human
ENSG00000133636NTSC0011570Mental Depression1PSYGENET
ENSG00000133636NTSC0011581Depressive disorder1PSYGENET
ENSG00000133636NTSC0026837Muscle Rigidity1CTD_human
ENSG00000133636NTSC0036341Schizophrenia4PSYGENET
ENSG00000133636NTSC0151564Cogwheel Rigidity1CTD_human
ENSG00000133636NTSC0231519Gegenhalten1CTD_human
ENSG00000133636NTSC0233608Catatonic Rigidity1CTD_human
ENSG00000133636NTSC0233612Waxy flexibility1CTD_human
ENSG00000133636NTSC0239325Extensor Rigidity1CTD_human
ENSG00000133636NTSC0277821Extrapyramidal Rigidity1CTD_human
ENSG00000133636NTSC0428977Bradycardia1CTD_human
ENSG00000133636NTSC0525045Mood Disorders1PSYGENET
ENSG00000133636NTSC0751217Hyperkinesia, Generalized2CTD_human
ENSG00000133636NTSC1320474Nuchal Rigidity1CTD_human
ENSG00000133636NTSC3887506Hyperkinesia2CTD_human