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Center for Computational Systems Medicine
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Gene summary

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Gene structure and Gene expression level

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Sex-biased somatic mutation

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DNA methylation with beta values in gene

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Exon skipping events with PSI in TCGA

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RNA A-to-I editing events in TCGA

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Sex-biased TF-Gene network of gene

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Sex-biased RBP-ES network of gene

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Sex-biased CeRNA regulation of gene

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Sex-biased eQTL regulation of gene

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Sex-biased eQTM regulation of gene

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Sex-biased sQTL regulation of gene

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Sex-biased sQTM regulation of gene

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Related disease information of gene

Gene: ENSG00000130414

Summary for NDUFA10

check button Gene summary

Gene informationEnsembl ID

ENSG00000130414

Gene symbol

NDUFA10

Gene nameNADH:ubiquinone oxidoreductase subunit A10
HGNC

7684

Entrez ID

4705

Gene typeprotein_coding
SynonymsNDUFA10|CI-42k
UniProtAcc

O95299


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

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Structure and expression level for NDUFA10

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

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Sex-biased somatic mutation for NDUFA10

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

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DNA methylation with beta values for NDUFA10

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
LUSCcg12807937chr2:240026503CGI:chr2:240024861-240025854promoter5.32e-017.91e-01-3.18e+001.48e-033.38e-03-2.60e-01
COADcg12807937chr2:240026503CGI:chr2:240024861-240025854promoter3.29e-014.30e-01-2.33e+001.99e-022.46e-02-1.01e-01
BLCAcg12807937chr2:240026503CGI:chr2:240024861-240025854promoter5.42e-018.04e-01-3.03e+002.47e-034.64e-03-2.62e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

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Exon skipping events with PSI in TCGA for NDUFA10

∗Please access ExonSkipDB for exon skipping annotation.
check buttonLandscape of exon skipping events across multiple cancer types.
AS event heatmap

check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

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RNA A-to-I editing events in TCGA for NDUFA10

∗Please access CAeditome for RNA editing annotation.
check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

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Sex-biased TF-Gene network for NDUFA10

check buttonTFs related to NDUFA10.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
TF Gene
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
UVMZNF418NDUFA105.06e+009.91e-013.01e+002.04e-03Male-biased

check buttonNDUFA10 related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

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Sex-biased RBP-ES network for NDUFA10

check buttonRBPs related to ES in NDUFA10.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
RBP ES
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
LUADESRP2exon_skip_3476658.10e+008.74e-038.44e+009.84e-01Female-biased
LUADPABPC3exon_skip_3476851.04e+019.93e-011.00e+015.53e-03Male-biased
KIRPESRP2exon_skip_3476658.66e+009.87e-018.31e+007.32e-03Male-biased
ESCAESRP2exon_skip_3476658.23e+003.81e-038.80e+009.91e-01Female-biased
ESCAPABPC3exon_skip_3476859.89e+001.76e-021.03e+019.81e-01Female-biased
READPABPC3exon_skip_3476851.00e+011.16e-021.04e+019.87e-01Female-biased
MESOPABPC3exon_skip_3476851.01e+011.67e-021.04e+019.82e-01Female-biased
KICHPABPC3exon_skip_3476859.97e+002.71e-031.04e+019.96e-01Female-biased
HNSCESRP2exon_skip_3476658.59e+009.84e-018.24e+009.94e-03Male-biased

check buttonNDUFA10 related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

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Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

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Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs13002508chr2:236589213:C:T-0.1991956703148890.0170269486403829READFemale-baised eQTL
rs35353865chr2:236590630:G:C-0.1991956703148890.0170269486403829READFemale-baised eQTL
rs34826828chr2:236591413:G:A-0.1991956703148890.0170269486403829READFemale-baised eQTL
rs35554987chr2:236597283:T:C-0.1991956703148890.0170269486403829READFemale-baised eQTL
rs76365399chr2:236599803:G:A-0.1991956703148890.0170269486403829READFemale-baised eQTL
rs55941889chr2:238051909:T:C-0.1365799727897648.04060336959911e-05SARCFemale-baised eQTL
rs72983136chr2:238075125:G:A-0.1019807920676090.00452150608601743SARCFemale-baised eQTL
rs76807023chr2:238067026:C:T-0.1018212203058820.00478659633629022SARCFemale-baised eQTL
rs11678642chr2:238088184:G:A-0.09573951932126910.00991322941191022SARCFemale-baised eQTL
rs56379553chr2:238089675:C:T-0.09142822349936510.0151442357433621SARCFemale-baised eQTL
rs11899347chr2:238040975:G:A-0.08661993203557440.0200489180332326SARCFemale-baised eQTL
rs59894346chr2:238049769:T:A-0.08570500166029090.0236673260219928SARCFemale-baised eQTL
rs7563804chr2:238037969:C:G-0.08154622165302570.0361820798068453SARCFemale-baised eQTL
rs80221317chr2:238065219:C:T-0.08216617150997560.0363482778850579SARCFemale-baised eQTL
rs10933424chr2:233007698:T:C-0.2420387146312070.00396290584376777KIRPFemale-baised eQTL
rs6750171chr2:230932834:C:T-0.07903755452036860.0318086008924101KIRCFemale-baised eQTL
rs10204538chr2:232216873:T:C-0.0849524820281340.0175026049981772LUADFemale-baised eQTL
rs11890255chr2:237525962:A:G-0.05017687110946080.0425793869923996LUADFemale-baised eQTL
rs28397262chr2:235171356:C:T-0.05901267409438910.0466053100852348LUADFemale-baised eQTL
rs111339512chr2:237521808:G:A-0.05229697158373610.0483884940191605LUADFemale-baised eQTL
rs113280486chr2:237521811:G:C-0.05229697158373610.0483884940191605LUADFemale-baised eQTL
rs60604278chr2:237521828:G:C-0.05229697158373610.0483884940191605LUADFemale-baised eQTL
rs74001391chr2:237521833:G:A-0.05229697158373610.0483884940191605LUADFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs13431103chr2:236752316:G:A--0.1077007891309610.0204511960043385BLCAMale-baised eQTL
rs11681518chr2:238727629:C:G-0.06613494960123140.000183764166725806LUADMale-baised eQTL
rs116141103chr2:239597654:T:C-0.04859261911525150.00539413249816987LUADMale-baised eQTL
rs35862416chr2:234304237:G:A-0.04299569804966130.012783245289987LUADMale-baised eQTL
rs34115968chr2:234304830:C:T-0.04299569804966130.012783245289987LUADMale-baised eQTL
rs34308241chr2:234304957:A:C-0.04299569804966130.012783245289987LUADMale-baised eQTL
rs71423631chr2:234305355:A:G-0.04299569804966130.012783245289987LUADMale-baised eQTL
rs36018891chr2:234306223:T:C-0.04299569804966130.012783245289987LUADMale-baised eQTL
rs13001243chr2:234306004:G:A-0.03894262180736830.0267981433196724LUADMale-baised eQTL
rs6431597chr2:238502702:G:C-0.03685174552606080.0485836373903464LUADMale-baised eQTL
rs838705chr2:233364596:G:A--0.05265764907651290.0430139533244921COADMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

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Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription
eQTM boxplot analysisGene ID: ENSG00000130414
CpG Site: cg17992259
Position to Gene: gene
Male Effect: -0.490639711456161
Female Effect: -
eQTM boxplot analysisGene ID: ENSG00000130414
CpG Site: cg19093890
Position to Gene: gene
Male Effect: -0.0969334988401362
Female Effect: -

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type
cg17992259chr2:239905643gene-0.4906397114561611.75455060181605e-193-0.99164317268519631.5181557458879376e-198LUAD
cg19093890chr2:239928767gene-0.09693349884013628.91100359471025e-09-0.43595618333228019.247853147770354e-12LUAD

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

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Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

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Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

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Related disease information of NDUFA10

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource