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Center for Computational Systems Medicine
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Gene summary

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Gene structure and Gene expression level

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Sex-biased somatic mutation

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DNA methylation with beta values in gene

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Exon skipping events with PSI in TCGA

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RNA A-to-I editing events in TCGA

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Sex-biased TF-Gene network of gene

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Sex-biased RBP-ES network of gene

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Sex-biased CeRNA regulation of gene

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Sex-biased eQTL regulation of gene

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Sex-biased eQTM regulation of gene

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Sex-biased sQTL regulation of gene

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Sex-biased sQTM regulation of gene

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Related disease information of gene

Gene: ENSG00000124207

Summary for CSE1L

check button Gene summary

Gene informationEnsembl ID

ENSG00000124207

Gene symbol

CSE1L

Gene namechromosome segregation 1 like
HGNC

2431

Entrez ID

1434

Gene typeprotein_coding
SynonymsCSE1L|CAS|XPO2|CSE1
UniProtAcc

P55060


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

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Structure and expression level for CSE1L

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
CSE1L6.92e+031.49e+002.40e-016.23e+004.73e-101.07e-08READ

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Sex-biased somatic mutation for CSE1L

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

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DNA methylation with beta values for CSE1L

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
LIHCcg00340382chr20:49045869CGI:chr20:49046195-49046912promoter1.64e-012.76e-01-5.79e+006.87e-095.88e-08-1.11e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

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Exon skipping events with PSI in TCGA for CSE1L

∗Please access ExonSkipDB for exon skipping annotation.
check buttonLandscape of exon skipping events across multiple cancer types.
AS event heatmap

check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

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RNA A-to-I editing events in TCGA for CSE1L

∗Please access CAeditome for RNA editing annotation.
check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

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Sex-biased TF-Gene network for CSE1L

check buttonTFs related to CSE1L.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
TF Gene
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
ACCPRDM6CSE1L4.01e+009.87e-012.78e+001.55e-03Male-biased
ACCZNF182CSE1L4.23e+009.89e-013.11e+002.61e-03Male-biased
ACCZNF22CSE1L4.23e+009.90e-013.06e+002.06e-03Male-biased
ACCZNF225CSE1L4.20e+009.90e-012.93e+001.34e-03Male-biased
ACCZNF235CSE1L4.20e+009.91e-012.89e+001.14e-03Male-biased
ACCZNF287CSE1L4.25e+009.91e-013.01e+001.53e-03Male-biased
ACCZNF384CSE1L3.97e+009.85e-012.88e+002.75e-03Male-biased
ACCZNF487CSE1L4.13e+009.89e-012.98e+002.19e-03Male-biased
ACCZNF613CSE1L4.11e+009.88e-013.02e+002.90e-03Male-biased
BLCAZNF225CSE1L4.17e+009.80e-013.31e+007.69e-03Male-biased
BLCAZNF235CSE1L4.22e+009.82e-013.33e+007.19e-03Male-biased
BLCAZNF79CSE1L4.16e+009.86e-012.83e+001.58e-03Male-biased
ESCAZNF121CSE1L4.30e+009.84e-013.55e+008.42e-03Male-biased
ESCAZNF181CSE1L4.24e+009.83e-013.50e+009.09e-03Male-biased
ESCAZNF22CSE1L4.13e+009.84e-013.35e+006.62e-03Male-biased
ESCAZNF235CSE1L3.98e+009.81e-013.18e+005.87e-03Male-biased
ESCAZNF443CSE1L4.36e+009.85e-013.60e+007.68e-03Male-biased
ESCAZNF496CSE1L4.28e+009.86e-013.49e+006.51e-03Male-biased
MESOZNF182CSE1L3.99e+009.85e-012.07e+007.96e-04Male-biased
MESOZNF22CSE1L4.03e+009.86e-012.11e+007.96e-04Male-biased
MESOZNF225CSE1L3.84e+009.80e-012.02e+001.11e-03Male-biased
MESOZNF235CSE1L3.92e+009.83e-012.11e+001.18e-03Male-biased
MESOZNF287CSE1L3.86e+009.80e-012.15e+001.68e-03Male-biased
MESOZNF443CSE1L4.17e+009.80e-012.93e+008.49e-03Male-biased
MESOZNF613CSE1L3.87e+009.81e-012.07e+001.24e-03Male-biased
PCPGZNF79CSE1L4.06e+001.36e-024.80e+009.82e-01Female-biased

check buttonCSE1L related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

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Sex-biased RBP-ES network for CSE1L

check buttonRBPs related to ES in CSE1L.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
RBP ES
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
STADQKIexon_skip_3528951.17e+019.89e-011.13e+019.96e-03Male-biased
UVMTARDBPexon_skip_3528817.26e+005.99e-037.60e+009.84e-01Female-biased
THYMQKIexon_skip_3528951.28e+019.99e-011.22e+015.38e-04Male-biased
LIHCSRSF9exon_skip_3528808.28e+009.86e-017.84e+006.75e-03Male-biased
LIHCZFP36exon_skip_3528939.00e+001.27e-029.36e+009.84e-01Female-biased
LUADANKHD1exon_skip_3528921.27e+013.17e-031.31e+019.97e-01Female-biased
LUADQKIexon_skip_3528951.18e+011.44e-031.23e+019.98e-01Female-biased
CHOLANKHD1exon_skip_3528921.41e+019.96e-011.36e+013.45e-03Male-biased
CHOLSRSF9exon_skip_3528808.41e+009.84e-017.99e+008.92e-03Male-biased
BRCAANKHD1exon_skip_3528921.32e+019.84e-011.27e+011.59e-02Male-biased
ESCAANKHD1exon_skip_3528921.25e+015.67e-031.30e+019.94e-01Female-biased
ESCAQKIexon_skip_3528951.20e+019.97e-011.13e+012.81e-03Male-biased
THCAANKHD1exon_skip_3528921.33e+019.99e-011.28e+013.18e-04Male-biased
THCABRUNOL4exon_skip_3528927.57e+009.81e-017.27e+009.48e-03Male-biased
THCABRUNOL5exon_skip_3528927.58e+009.81e-017.28e+009.53e-03Male-biased
THCAhnRNPLLexon_skip_3528927.49e+009.80e-017.19e+009.61e-03Male-biased
THCAQKIexon_skip_3528951.21e+019.98e-011.17e+011.22e-03Male-biased
PCPGANKHD1exon_skip_3528921.30e+019.97e-011.26e+012.72e-03Male-biased
MESOANKHD1exon_skip_3528921.28e+019.99e-011.22e+018.78e-04Male-biased
MESOBRUNOL4exon_skip_3528927.67e+009.84e-017.27e+006.29e-03Male-biased
MESOBRUNOL5exon_skip_3528927.68e+009.84e-017.28e+006.30e-03Male-biased
MESOhnRNPLLexon_skip_3528927.59e+009.84e-017.19e+006.26e-03Male-biased
MESOQKIexon_skip_3528951.20e+011.81e-031.25e+019.98e-01Female-biased
MESOZFP36exon_skip_3528939.13e+001.69e-029.44e+009.80e-01Female-biased
GBMANKHD1exon_skip_3528921.26e+014.39e-031.30e+019.95e-01Female-biased
GBMBRUNOL4exon_skip_3528927.31e+009.75e-037.65e+009.80e-01Female-biased
GBMBRUNOL5exon_skip_3528927.32e+009.74e-037.67e+009.80e-01Female-biased
GBMhnRNPLLexon_skip_3528927.23e+009.81e-037.57e+009.80e-01Female-biased
PAADQKIexon_skip_3528951.20e+013.56e-041.26e+019.99e-01Female-biased
KIRCQKIexon_skip_3528951.16e+011.56e-031.21e+019.98e-01Female-biased
KICHZFP36exon_skip_3528938.83e+004.18e-039.23e+009.92e-01Female-biased
BLCAANKHD1exon_skip_3528921.29e+013.97e-031.33e+019.96e-01Female-biased
SKCMQKIexon_skip_3528951.17e+014.77e-031.21e+019.95e-01Female-biased
HNSCANKHD1exon_skip_3528921.22e+011.29e-031.27e+019.98e-01Female-biased
HNSCQKIexon_skip_3528951.16e+014.10e-041.22e+019.99e-01Female-biased
SARCANKHD1exon_skip_3528921.32e+019.96e-011.27e+013.58e-03Male-biased
SARCQKIexon_skip_3528951.26e+019.97e-011.21e+012.52e-03Male-biased

check buttonCSE1L related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

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Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

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Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs6012228chr20:47629475:G:A-0.2165036036055620.015767562680002PAADFemale-baised eQTL
rs6018606chr20:47634250:G:A-0.2165036036055620.015767562680002PAADFemale-baised eQTL
rs2273022chr20:47627456:C:G-0.2009569590524540.031624837419004PAADFemale-baised eQTL
rs6018602chr20:47632341:A:G-0.2009569590524540.031624837419004PAADFemale-baised eQTL
rs6012229chr20:47632730:C:T-0.2009569590524540.031624837419004PAADFemale-baised eQTL
rs6018603chr20:47633106:T:C-0.2009569590524540.031624837419004PAADFemale-baised eQTL
rs6069656chr20:56224751:A:T--0.3015928622233490.000649404827431967GBMFemale-baised eQTL
rs4811677chr20:56225947:G:C--0.1797736958426140.0198986180654914GBMFemale-baised eQTL
rs4811678chr20:56225976:C:A--0.1797736958426140.0198986180654914GBMFemale-baised eQTL
rs4811680chr20:56226159:A:G--0.1797736958426140.0198986180654914GBMFemale-baised eQTL
rs66870733chr20:56227533:A:G-0.1739179204841630.048531312190192GBMFemale-baised eQTL
rs4811681chr20:56226316:G:A--0.1739179204841630.048531312190192GBMFemale-baised eQTL
rs6069663chr20:56227803:T:A--0.1739179204841630.048531312190192GBMFemale-baised eQTL
rs4589822chr20:56228669:G:A--0.1739179204841630.048531312190192GBMFemale-baised eQTL
rs1853917chr20:56228772:G:A--0.1739179204841630.048531312190192GBMFemale-baised eQTL
rs1276444chr20:56960082:T:C-0.2202796214106850.0483148080201629LIHCFemale-baised eQTL
rs62200258chr20:47768731:G:A-0.2004542420201730.0338766776504541STADFemale-baised eQTL
rs244104chr20:44591335:T:C-0.1486316311171910.0397597878267783STADFemale-baised eQTL
rs218463chr20:58637485:G:A--0.08415244676926350.0322461298991628COADFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs7352741chr20:57228093:C:T-0.0442254711413430.0028536013045737KIRCMale-baised eQTL
rs35468019chr20:57227041:G:A-0.04378887499120950.00321864517005887KIRCMale-baised eQTL
rs17404303chr20:57228631:C:T-0.04353861761683450.00463226917547692KIRCMale-baised eQTL
rs55977030chr20:57230111:G:A-0.04353861761683450.00463226917547692KIRCMale-baised eQTL
rs6070031chr20:57225881:C:T-0.04302466942477570.00518502370913491KIRCMale-baised eQTL
rs6122778chr20:49267405:T:A-0.04009044698067060.0133338350267294KIRCMale-baised eQTL
rs8123651chr20:57239192:T:C-0.0398191363932930.0172657624990057KIRCMale-baised eQTL
rs8117076chr20:57239421:C:T-0.0398191363932930.0172657624990057KIRCMale-baised eQTL
rs62205689chr20:57238549:C:T-0.03969522826950630.0176376033607239KIRCMale-baised eQTL
rs466272chr20:54823655:G:A-0.06371483421515260.000816865669940705BLCAMale-baised eQTL
rs462247chr20:54821973:C:T-0.06303923210990750.000962683220448566BLCAMale-baised eQTL
rs459656chr20:54821974:A:G-0.06303923210990750.000962683220448566BLCAMale-baised eQTL
rs2756957chr20:54822329:G:T-0.06303923210990750.000962683220448566BLCAMale-baised eQTL
rs2756958chr20:54822470:C:T-0.06303923210990750.000962683220448566BLCAMale-baised eQTL
rs2756959chr20:54822553:T:G-0.06303923210990750.000962683220448566BLCAMale-baised eQTL
rs2756960chr20:54822580:A:G-0.06303923210990750.000962683220448566BLCAMale-baised eQTL
rs2668395chr20:54822878:T:C-0.06267846231756640.00104602657090502BLCAMale-baised eQTL
rs2668394chr20:54823016:C:T-0.06267846231756640.00104602657090502BLCAMale-baised eQTL
rs2668396chr20:54822850:T:C-0.06181020724200540.00155928551549008BLCAMale-baised eQTL
rs373305065chr20:54812916:C:A-0.05988004792977970.00384801056853998BLCAMale-baised eQTL
rs371075682chr20:54812934:G:A-0.05988004792977970.00384801056853998BLCAMale-baised eQTL
rs6029839chr20:41835574:C:A--0.05225509575510410.023936848592067BLCAMale-baised eQTL
rs6092425chr20:57108959:G:A-0.06506580539872790.0246415089505761BLCAMale-baised eQTL
rs6029791chr20:41732145:G:T--0.05997384681938290.026547239892863BLCAMale-baised eQTL
rs67707535chr20:41851817:T:C--0.06015486461668090.0323999698376428BLCAMale-baised eQTL
rs116525170chr20:57110160:C:A-0.06238649508250950.0373590228242602BLCAMale-baised eQTL
rs6099465chr20:57110405:G:A-0.06238649508250950.0373590228242602BLCAMale-baised eQTL
rs2226109chr20:41853046:G:A--0.05907384335096170.0375719271270885BLCAMale-baised eQTL
rs4810734chr20:47939152:C:G--0.09104505293327230.0391554732614989BLCAMale-baised eQTL
rs8114788chr20:41851751:G:A--0.05881902030053410.0398801200850539BLCAMale-baised eQTL
rs67495374chr20:41851802:T:G--0.05881902030053410.0398801200850539BLCAMale-baised eQTL
rs6098196chr20:54723827:C:T--0.06432202810459730.0410562015545947BLCAMale-baised eQTL
rs6126769chr20:53162976:A:C--0.07040483678363430.0412847404622706BLCAMale-baised eQTL
rs7268621chr20:41839167:A:G--0.05805769987730680.0417069932314271BLCAMale-baised eQTL
rs6094919chr20:47941535:C:G--0.09163514518921040.0438310711649972BLCAMale-baised eQTL
rs4810340chr20:41823990:C:T--0.04959583608053260.0453288962659103BLCAMale-baised eQTL
rs6129951chr20:41827087:G:C--0.04942498280047480.0460539918611297BLCAMale-baised eQTL
rs67959624chr20:41839739:G:C--0.05532314933284330.049232833906291BLCAMale-baised eQTL
rs6124385chr20:41828551:C:T--0.04896442202484890.0493492929202444BLCAMale-baised eQTL
rs4812588chr20:42344294:T:C-0.06735108214165360.0395477714320176COADMale-baised eQTL
rs6013798chr20:53790701:G:C-0.07111739621762760.0465056188025379COADMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

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Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

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Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

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Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

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Related disease information of CSE1L

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource