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Gene: ENSG00000115839 |
Summary for RAB3GAP1 |
 Gene summary |
| Gene information | Ensembl ID | ENSG00000115839 | Gene symbol | RAB3GAP1 |
| Gene name | RAB3 GTPase activating protein catalytic subunit 1 | |
| HGNC | 17063 | |
| Entrez ID | 22930 | |
| Gene type | protein_coding | |
| Synonyms | RAB3GAP1|RAB3GAP|KIAA0066|RAB3GAP130|WARBM1 | |
| UniProtAcc | Q15042 |
| Drugs associated with this gene(DrugBank). |
| Gene ID | Gene Symbol | Drug ID | Drug Name | Drug Type |
| Cancer therapeutic drugs associated with this gene(NCI). |
| Gene ID | Gene Name | Drug ID | Drug Name | Drug Type | Cancer |
Top |
Structure and expression level for RAB3GAP1 |
| AS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure. ∗For more information on exon skipping events please check the ExonskipDB database. ∗For more information on exon skipping events please check the CAeditome database. |
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| Landscape of gene expressions across multiple cancer types. |
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| Differentially expressed gene analysis between tumor male and tumor female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| Differentially expressed gene analysis between tumor male and normal male samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| Differentially expressed gene analysis between tumor female and normal female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
Top |
Sex-biased somatic mutation for RAB3GAP1 |
| ∗For more information on exon skipping events please check the ExonskipDB database. |
| Gene ID | Cancer Type | Hugo Symbol | Male | Female | pval | or | ci.up | ci.low | adjPval |
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DNA methylation with beta values for RAB3GAP1 |
| Landscape of DNA methylation across multiple cancer types. |
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| Differentially expressed CpG sites between male tumor and female tumor patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| Differentially expressed CpG sites between male tumor and male normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| LUSC | cg20995127 | chr2:135050799 | CGI:chr2:135052222-135052688 | promoter | 8.10e-01 | 6.97e-01 | 3.20e+00 | 1.36e-03 | 3.20e-03 | 1.13e-01 |
| ESCA | cg20995127 | chr2:135050799 | CGI:chr2:135052222-135052688 | promoter | 7.81e-01 | 5.21e-01 | 2.95e+00 | 3.19e-03 | 3.38e-02 | 2.59e-01 |
| Differentially expressed CpG sites between female tumor and female normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| BRCA | cg20995127 | chr2:135050799 | CGI:chr2:135052222-135052688 | promoter | 5.14e-01 | 7.40e-01 | -9.58e+00 | 9.45e-22 | 5.95e-21 | -2.26e-01 |
| BRCA | cg08471896 | chr2:135050990 | CGI:chr2:135052222-135052688 | promoter | 7.10e-01 | 8.80e-01 | -6.43e+00 | 1.26e-10 | 3.30e-10 | -1.71e-01 |
| BRCA | cg17339905 | chr2:135051047 | CGI:chr2:135052222-135052688 | promoter | 7.25e-01 | 8.69e-01 | -4.90e+00 | 9.73e-07 | 1.81e-06 | -1.44e-01 |
| HNSC | cg20995127 | chr2:135050799 | CGI:chr2:135052222-135052688 | promoter | 8.29e-01 | 7.13e-01 | 2.68e+00 | 7.35e-03 | 1.59e-02 | 1.16e-01 |
Top |
Exon skipping events with PSI in TCGA for RAB3GAP1 |
| ∗Please access ExonSkipDB for exon skipping annotation. |
| Landscape of exon skipping events across multiple cancer types. |
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| Differentially expressed exon skipping events between male tumor and female tumor patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
| Differentially expressed exon skipping events between male tumor and male normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
| Differentially expressed exon skipping events between female tumor and female normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
Top |
RNA A-to-I editing events in TCGA for RAB3GAP1 |
| ∗Please access CAeditome for RNA editing annotation. |
| Differentially expressed RNA editing events between male tumor and female tumor patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| Differentially expressed RNA editing events between male tumor and male normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| Differentially expressed RNA editing events between female tumor and female normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
| Protein coding RNA editing(s). |
| Editing Position | Variant Type | Gene Symbol | Transcript ID | NTchange | AAchange |
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Sex-biased TF-Gene network for RAB3GAP1 |
| TFs related to RAB3GAP1. ∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
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| Cancer Type | TF | Target Gene | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| SARC | ZNF418 | RAB3GAP1 | 4.84e+00 | 9.83e-01 | 4.32e+00 | 1.25e-02 | Male-biased |
| RAB3GAP1 related gene. ∗Only the gene encode TF might with this result. ∗For more information please check Sex-biased TF-Coding gene network. |
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Sex-biased RBP-ES network for RAB3GAP1 |
| RBPs related to ES in RAB3GAP1. ∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
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| Cancer Type | RBP | Target ES | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| STAD | MATR3 | exon_skip_329967 | 8.28e+00 | 9.84e-01 | 7.92e+00 | 8.90e-03 | Male-biased |
| STAD | QKI | exon_skip_329967 | 1.31e+01 | 9.97e-01 | 1.26e+01 | 3.13e-03 | Male-biased |
| UVM | MATR3 | exon_skip_329967 | 8.04e+00 | 3.80e-03 | 8.42e+00 | 9.89e-01 | Female-biased |
| UVM | QKI | exon_skip_329967 | 1.33e+01 | 1.54e-03 | 1.38e+01 | 9.98e-01 | Female-biased |
| UVM | RBM41 | exon_skip_329965 | 8.46e+00 | 5.52e-03 | 8.81e+00 | 9.89e-01 | Female-biased |
| UVM | RBM6 | exon_skip_329972 | 1.00e+01 | 9.88e-01 | 9.73e+00 | 1.04e-02 | Male-biased |
| LIHC | RBM6 | exon_skip_329972 | 9.61e+00 | 1.66e-02 | 9.95e+00 | 9.81e-01 | Female-biased |
| COAD | MATR3 | exon_skip_329967 | 8.28e+00 | 9.87e-01 | 7.89e+00 | 5.75e-03 | Male-biased |
| COAD | QKI | exon_skip_329967 | 1.32e+01 | 9.96e-01 | 1.28e+01 | 3.63e-03 | Male-biased |
| COAD | RBM6 | exon_skip_329972 | 9.89e+00 | 9.96e-01 | 9.41e+00 | 2.22e-03 | Male-biased |
| DLBC | IGF2BP2 | exon_skip_329975 | 8.84e+00 | 1.06e-02 | 9.17e+00 | 9.85e-01 | Female-biased |
| DLBC | IGF2BP3 | exon_skip_329975 | 8.81e+00 | 1.09e-02 | 9.14e+00 | 9.85e-01 | Female-biased |
| DLBC | RBM6 | exon_skip_329972 | 1.01e+01 | 9.94e-01 | 9.64e+00 | 3.89e-03 | Male-biased |
| LUAD | QKI | exon_skip_329967 | 1.29e+01 | 9.80e-01 | 1.27e+01 | 1.93e-02 | Male-biased |
| CHOL | MATR3 | exon_skip_329967 | 7.97e+00 | 4.64e-03 | 8.48e+00 | 9.89e-01 | Female-biased |
| CHOL | QKI | exon_skip_329967 | 1.32e+01 | 1.92e-03 | 1.39e+01 | 9.98e-01 | Female-biased |
| CHOL | RBM6 | exon_skip_329972 | 9.94e+00 | 9.85e-01 | 9.57e+00 | 1.31e-02 | Male-biased |
| KIRP | QKI | exon_skip_329967 | 1.34e+01 | 9.62e-04 | 1.40e+01 | 9.99e-01 | Female-biased |
| KIRP | RBM6 | exon_skip_329972 | 9.62e+00 | 1.25e-02 | 9.94e+00 | 9.85e-01 | Female-biased |
| READ | IGF2BP2 | exon_skip_329975 | 8.53e+00 | 7.40e-03 | 8.89e+00 | 9.88e-01 | Female-biased |
| READ | IGF2BP3 | exon_skip_329975 | 8.50e+00 | 7.45e-03 | 8.86e+00 | 9.88e-01 | Female-biased |
| READ | MATR3 | exon_skip_329967 | 7.92e+00 | 1.01e-02 | 8.25e+00 | 9.82e-01 | Female-biased |
| READ | QKI | exon_skip_329967 | 1.24e+01 | 1.01e-03 | 1.30e+01 | 9.99e-01 | Female-biased |
| THCA | IGF2BP2 | exon_skip_329975 | 8.92e+00 | 9.89e-01 | 8.60e+00 | 6.85e-03 | Male-biased |
| THCA | IGF2BP3 | exon_skip_329975 | 8.89e+00 | 9.88e-01 | 8.57e+00 | 6.95e-03 | Male-biased |
| PCPG | RBM6 | exon_skip_329972 | 1.00e+01 | 9.94e-01 | 9.61e+00 | 4.12e-03 | Male-biased |
| MESO | RBM6 | exon_skip_329972 | 9.64e+00 | 1.26e-02 | 9.97e+00 | 9.85e-01 | Female-biased |
| LGG | IGF2BP2 | exon_skip_329975 | 8.57e+00 | 8.54e-03 | 8.91e+00 | 9.87e-01 | Female-biased |
| LGG | IGF2BP3 | exon_skip_329975 | 8.53e+00 | 8.61e-03 | 8.88e+00 | 9.87e-01 | Female-biased |
| GBM | QKI | exon_skip_329967 | 1.29e+01 | 3.15e-03 | 1.34e+01 | 9.97e-01 | Female-biased |
| GBM | RBM6 | exon_skip_329972 | 9.56e+00 | 6.08e-03 | 9.94e+00 | 9.92e-01 | Female-biased |
| KICH | QKI | exon_skip_329967 | 1.27e+01 | 1.29e-03 | 1.32e+01 | 9.98e-01 | Female-biased |
| SARC | RBM6 | exon_skip_329972 | 9.59e+00 | 9.61e-03 | 9.96e+00 | 9.88e-01 | Female-biased |
| RAB3GAP1 related ES. ∗Only the gene encode RBP might with this result. ∗For more information please check Sex-biased RBP-ES network in cancer. |
Top |
Sex-biased CeRNA regulation of gene |
| Sex-biased CeRNA regulation of gene. |
| Gene ID | ceRNA(lncRNA-miRNA-mRNA) | Group | Cancer Type |
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Sex-biased eQTL regulation of gene |
| Sex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| eQTL | Description |
| Male-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs12105849 | chr2:137173616:T:G | - | 0.171685036299355 | 0.0248952766401644 | HNSC | Female-baised eQTL |
| rs13028992 | chr2:137174127:T:G | - | 0.171685036299355 | 0.0248952766401644 | HNSC | Female-baised eQTL |
| rs13034924 | chr2:137174525:T:C | - | 0.171685036299355 | 0.0248952766401644 | HNSC | Female-baised eQTL |
| rs12104704 | chr2:137175010:G:T | - | 0.171685036299355 | 0.0248952766401644 | HNSC | Female-baised eQTL |
| rs36093619 | chr2:137175773:C:T | - | 0.171685036299355 | 0.0248952766401644 | HNSC | Female-baised eQTL |
| rs35896985 | chr2:137176785:A:G | - | 0.171685036299355 | 0.0248952766401644 | HNSC | Female-baised eQTL |
| rs34712067 | chr2:137178416:A:G | - | 0.171685036299355 | 0.0248952766401644 | HNSC | Female-baised eQTL |
| rs35620731 | chr2:137181165:T:C | - | 0.171685036299355 | 0.0248952766401644 | HNSC | Female-baised eQTL |
| rs34100922 | chr2:137181334:T:A | - | 0.171685036299355 | 0.0248952766401644 | HNSC | Female-baised eQTL |
| rs11892798 | chr2:137181820:A:G | - | 0.171685036299355 | 0.0248952766401644 | HNSC | Female-baised eQTL |
| rs11897956 | chr2:137182131:G:A | - | 0.171685036299355 | 0.0248952766401644 | HNSC | Female-baised eQTL |
| rs920097 | chr2:137173162:C:A | - | 0.161163107980628 | 0.0419939156605824 | HNSC | Female-baised eQTL |
| rs16825509 | chr2:133477391:T:C | - | 0.236758767578323 | 0.00175441476895299 | GBM | Female-baised eQTL |
| rs6742928 | chr2:133480345:C:A | - | 0.236182497994343 | 0.00181772227035704 | GBM | Female-baised eQTL |
| rs75120432 | chr2:133483670:C:T | - | 0.236182497994343 | 0.00181772227035704 | GBM | Female-baised eQTL |
| rs17747958 | chr2:133501027:A:G | - | 0.236182497994343 | 0.00181772227035704 | GBM | Female-baised eQTL |
| rs59937852 | chr2:133501165:T:C | - | 0.236182497994343 | 0.00181772227035704 | GBM | Female-baised eQTL |
| rs17815418 | chr2:133501260:C:A | - | 0.236182497994343 | 0.00181772227035704 | GBM | Female-baised eQTL |
| rs6755702 | chr2:133501401:G:A | - | 0.236182497994343 | 0.00181772227035704 | GBM | Female-baised eQTL |
| rs58148129 | chr2:133501431:C:T | - | 0.236182497994343 | 0.00181772227035704 | GBM | Female-baised eQTL |
| rs78015341 | chr2:133502888:G:A | - | 0.236182497994343 | 0.00181772227035704 | GBM | Female-baised eQTL |
| rs61599793 | chr2:133503264:T:C | - | 0.236182497994343 | 0.00181772227035704 | GBM | Female-baised eQTL |
| rs78316315 | chr2:133504879:A:C | - | 0.236182497994343 | 0.00181772227035704 | GBM | Female-baised eQTL |
| rs78096865 | chr2:133505108:T:C | - | 0.236182497994343 | 0.00181772227035704 | GBM | Female-baised eQTL |
| rs16825505 | chr2:133477343:C:T | - | 0.234795250796569 | 0.0069751191323089 | GBM | Female-baised eQTL |
| rs13399787 | chr2:133478441:G:A | - | 0.234795250796569 | 0.0069751191323089 | GBM | Female-baised eQTL |
| rs78120132 | chr2:133492616:C:T | - | 0.234315562210216 | 0.00719073206785746 | GBM | Female-baised eQTL |
| rs74327451 | chr2:133492757:T:C | - | 0.234315562210216 | 0.00719073206785746 | GBM | Female-baised eQTL |
| rs77736128 | chr2:133498286:C:T | - | 0.234315562210216 | 0.00719073206785746 | GBM | Female-baised eQTL |
| rs16845680 | chr2:141241558:A:T | - | 0.170033122638448 | 0.00799841290584182 | GBM | Female-baised eQTL |
| rs10201373 | chr2:133474316:A:G | - | 0.202180546748043 | 0.0107175979078687 | GBM | Female-baised eQTL |
| rs13392024 | chr2:133172648:T:G | - | 0.229113302149661 | 0.012220002566828 | GBM | Female-baised eQTL |
| rs73962875 | chr2:141246210:C:A | - | 0.169187874193851 | 0.0128511148343008 | GBM | Female-baised eQTL |
| rs7340510 | chr2:133509798:T:C | - | 0.227666741516738 | 0.0130390781608039 | GBM | Female-baised eQTL |
| rs72617005 | chr2:133160960:T:C | - | 0.211363970144653 | 0.0207932588932552 | GBM | Female-baised eQTL |
| rs10190263 | chr2:133168380:C:T | - | 0.211363970144653 | 0.0207932588932552 | GBM | Female-baised eQTL |
| rs9287424 | chr2:133173642:T:C | - | 0.210019971174332 | 0.0234213569854348 | GBM | Female-baised eQTL |
| rs2090806 | chr2:141275102:G:A | - | 0.187028933342534 | 0.0234213694032053 | GBM | Female-baised eQTL |
| rs61438901 | chr2:141257063:A:C | - | 0.175458887239814 | 0.0265726499344195 | GBM | Female-baised eQTL |
| rs1851162 | chr2:141258347:G:A | - | 0.174987951380993 | 0.0268147789765067 | GBM | Female-baised eQTL |
| rs2030256 | chr2:141258740:G:A | - | 0.174987951380993 | 0.0268147789765067 | GBM | Female-baised eQTL |
| rs3856359 | chr2:141269498:T:A | - | 0.174987951380993 | 0.0268147789765067 | GBM | Female-baised eQTL |
| rs77146613 | chr2:141252930:T:C | - | 0.173227096405961 | 0.0313465983830138 | GBM | Female-baised eQTL |
| rs13408209 | chr2:133473663:C:A | - | 0.177070299835598 | 0.0336552171535707 | GBM | Female-baised eQTL |
| rs10206425 | chr2:133474439:T:C | - | 0.177070299835598 | 0.0336552171535707 | GBM | Female-baised eQTL |
| rs73962895 | chr2:141274957:G:A | - | 0.177171504766585 | 0.0342222231624854 | GBM | Female-baised eQTL |
| rs2102973 | chr2:141275079:T:C | - | 0.177171504766585 | 0.0342222231624854 | GBM | Female-baised eQTL |
| rs76676626 | chr2:141275642:G:A | - | 0.177171504766585 | 0.0342222231624854 | GBM | Female-baised eQTL |
| rs7585350 | chr2:133473082:C:T | - | 0.193985421826521 | 0.0387594847186417 | GBM | Female-baised eQTL |
| rs76551938 | chr2:141307198:A:C | - | 0.175308166168668 | 0.0399206229611656 | GBM | Female-baised eQTL |
| rs58315763 | chr2:141307227:T:C | - | 0.175308166168668 | 0.0399206229611656 | GBM | Female-baised eQTL |
| rs12615230 | chr2:141311783:T:C | - | 0.175308166168668 | 0.0399206229611656 | GBM | Female-baised eQTL |
| rs12615262 | chr2:141311851:T:C | - | 0.175308166168668 | 0.0399206229611656 | GBM | Female-baised eQTL |
| rs2011090 | chr2:141312931:T:A | - | 0.175308166168668 | 0.0399206229611656 | GBM | Female-baised eQTL |
| rs1033314 | chr2:141313193:A:C | - | 0.175308166168668 | 0.0399206229611656 | GBM | Female-baised eQTL |
| rs10496877 | chr2:141318159:C:T | - | 0.175308166168668 | 0.0399206229611656 | GBM | Female-baised eQTL |
| rs60314997 | chr2:141253742:G:A | - | 0.165824432324141 | 0.0417519517408609 | GBM | Female-baised eQTL |
| rs62164220 | chr2:138292784:A:G | - | 0.177782445736097 | 0.0118344592856621 | SARC | Female-baised eQTL |
| rs7562944 | chr2:138287391:C:T | - | 0.160726033241445 | 0.0128973244243349 | SARC | Female-baised eQTL |
| rs62164191 | chr2:138268037:C:G | - | 0.176930396599555 | 0.0285098639269061 | SARC | Female-baised eQTL |
| rs2077724 | chr2:143924451:C:A | - | 0.0538943101818134 | 0.0202572450498384 | LUAD | Female-baised eQTL |
| rs59586861 | chr2:136450348:A:T | - | 0.081269297575091 | 0.0212004487914858 | LUAD | Female-baised eQTL |
| rs111783822 | chr2:141266526:T:C | - | 0.0683484343669102 | 0.0225210128084567 | LUAD | Female-baised eQTL |
| rs300409 | chr2:141258336:G:A | - | 0.0664790967624998 | 0.0283794719070773 | LUAD | Female-baised eQTL |
| rs300342 | chr2:141300462:A:C | - | 0.0843098538211382 | 0.0297366347645742 | LUAD | Female-baised eQTL |
| rs300400 | chr2:141267428:G:T | - | 0.0662235870155756 | 0.0316955311713473 | LUAD | Female-baised eQTL |
| rs59678568 | chr2:136545891:G:A | - | 0.0753492245714657 | 0.0389655633333381 | LUAD | Female-baised eQTL |
| rs77779501 | chr2:136547395:C:T | - | 0.0753492245714657 | 0.0389655633333381 | LUAD | Female-baised eQTL |
| rs74858690 | chr2:136537706:A:G | - | 0.0751010022002193 | 0.0422651163362441 | LUAD | Female-baised eQTL |
| rs77681945 | chr2:136551928:A:T | - | 0.0719836772914926 | 0.0477660252722476 | LUAD | Female-baised eQTL |
| rs10427266 | chr2:137315135:G:A | - | 0.165091294073054 | 0.0434263742260109 | COAD | Female-baised eQTL |
| rs981668 | chr2:133803428:C:A | - | -0.0792751855917216 | 0.0479140852396037 | COAD | Female-baised eQTL |
| Female-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs10187152 | chr2:133191756:C:T | - | 0.107536716449036 | 0.0063988906395669 | KIRC | Male-baised eQTL |
| rs925966 | chr2:136049389:C:G | - | 0.0481180507557682 | 0.0100539389206463 | KIRC | Male-baised eQTL |
| rs7371606 | chr2:136049204:G:A | - | 0.0474886793664508 | 0.0119739431836766 | KIRC | Male-baised eQTL |
| rs10178289 | chr2:133177407:G:A | - | 0.0957191803031338 | 0.0154447924307985 | KIRC | Male-baised eQTL |
| rs13404551 | chr2:135964425:T:C | - | -0.0441789734518327 | 0.0271408741063575 | KIRC | Male-baised eQTL |
| rs687670 | chr2:135983330:T:C | - | -0.0431760822783825 | 0.0286842787382177 | KIRC | Male-baised eQTL |
| rs309145 | chr2:135938568:A:G | - | -0.0429144209090347 | 0.0308428700964871 | KIRC | Male-baised eQTL |
| rs12475139 | chr2:136029081:T:A | - | -0.0425121989944784 | 0.0365977580069292 | KIRC | Male-baised eQTL |
| rs10186843 | chr2:135829388:C:A | - | 0.0427558805751966 | 0.0372748971311694 | KIRC | Male-baised eQTL |
| rs192822 | chr2:135924704:A:T | - | -0.0432184179121319 | 0.040104334734738 | KIRC | Male-baised eQTL |
| rs112742092 | chr2:135833608:G:A | - | -0.0429149223223913 | 0.0416260533686285 | KIRC | Male-baised eQTL |
| rs309168 | chr2:135912728:C:T | - | -0.0422228276332293 | 0.0420932341382366 | KIRC | Male-baised eQTL |
| rs309160 | chr2:135927658:C:T | - | -0.0422228276332293 | 0.0420932341382366 | KIRC | Male-baised eQTL |
| rs3769005 | chr2:135845796:C:G | - | 0.0419275872268091 | 0.0448619118531833 | KIRC | Male-baised eQTL |
| rs10207652 | chr2:135830908:T:A | - | 0.0416138038190047 | 0.0476989737369458 | KIRC | Male-baised eQTL |
| rs7586873 | chr2:129749823:A:G | - | -0.0805157213043265 | 0.0215589007018568 | LUAD | Male-baised eQTL |
| rs7589671 | chr2:129749791:T:G | - | -0.0768896135567992 | 0.0338595348697607 | LUAD | Male-baised eQTL |
| rs6726681 | chr2:129750743:C:G | - | -0.0754720541680212 | 0.0432933764719887 | LUAD | Male-baised eQTL |
| rs1351920 | chr2:138976837:C:T | - | 0.097883383635181 | 0.0133802434283316 | COAD | Male-baised eQTL |
| rs111783822 | chr2:141266526:T:C | - | 0.0959466164302826 | 0.0143630116836914 | COAD | Male-baised eQTL |
| rs300400 | chr2:141267428:G:T | - | 0.0959466164302826 | 0.0143630116836914 | COAD | Male-baised eQTL |
| rs300398 | chr2:141272258:A:G | - | 0.0959466164302826 | 0.0143630116836914 | COAD | Male-baised eQTL |
| rs300386 | chr2:141231559:G:A | - | 0.0985996256446489 | 0.0144939536951345 | COAD | Male-baised eQTL |
| rs6724173 | chr2:125429685:A:G | - | -0.0820932734996289 | 0.017064925947443 | COAD | Male-baised eQTL |
| rs300409 | chr2:141258336:G:A | - | 0.0926399577214771 | 0.0185703833228676 | COAD | Male-baised eQTL |
| rs592037 | chr2:134525865:T:C | - | 0.0594674792432273 | 0.0232317263476538 | COAD | Male-baised eQTL |
| rs35886473 | chr2:141318203:T:A | - | -0.0806439075793459 | 0.0235670946265822 | COAD | Male-baised eQTL |
| rs7578051 | chr2:132935210:T:C | - | 0.112370436296902 | 0.0236351159738235 | COAD | Male-baised eQTL |
| rs1465533 | chr2:125722352:A:C | - | 0.0820413398119194 | 0.0237850342813959 | COAD | Male-baised eQTL |
| rs300367 | chr2:141240611:G:A | - | 0.092889290735277 | 0.0240093409488732 | COAD | Male-baised eQTL |
| rs72852651 | chr2:142164216:T:A | - | 0.0865122567718582 | 0.0255779907317561 | COAD | Male-baised eQTL |
| rs17776043 | chr2:142166087:C:T | - | 0.0865122567718582 | 0.0255779907317561 | COAD | Male-baised eQTL |
| rs72852643 | chr2:142159754:G:T | - | 0.0837308763290034 | 0.0327991536377625 | COAD | Male-baised eQTL |
| rs114910255 | chr2:142160698:G:T | - | 0.0837308763290034 | 0.0327991536377625 | COAD | Male-baised eQTL |
| rs116377859 | chr2:142163105:C:T | - | 0.0837308763290034 | 0.0327991536377625 | COAD | Male-baised eQTL |
| rs17832578 | chr2:142165351:A:G | - | 0.0837308763290034 | 0.0327991536377625 | COAD | Male-baised eQTL |
| rs17776027 | chr2:142165963:G:A | - | 0.0837308763290034 | 0.0327991536377625 | COAD | Male-baised eQTL |
| rs2001872 | chr2:136764474:A:G | - | 0.0725229235872797 | 0.0333127529690946 | COAD | Male-baised eQTL |
| rs28718952 | chr2:126123887:C:A | - | 0.112583470402365 | 0.0350381592448005 | COAD | Male-baised eQTL |
| rs114880575 | chr2:125734648:A:T | - | 0.0730792884885174 | 0.0368179755285534 | COAD | Male-baised eQTL |
| rs6736784 | chr2:141001677:G:A | - | 0.0643500669599715 | 0.0390636111515235 | COAD | Male-baised eQTL |
| rs6721382 | chr2:142290519:C:G | - | 0.0820578464579382 | 0.0451388779046795 | COAD | Male-baised eQTL |
| rs1732605 | chr2:142289840:T:C | - | 0.08097634208767 | 0.0486295843373635 | COAD | Male-baised eQTL |
| Opposite sex-biased eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Sex-biased Gene in Cancer | Cancer Type |
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Sex-biased eQTM regulation of gene |
| Sex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table). |
| eQTM | Description |
| Male-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
| Female-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
| Opposite sex-biased eQTM regulation. |
| CpG Site | CpG Postion | CpG Island | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Male Cor | Male P-value | Female Cor | Female P-value | Sex-biased Coding Gene | Cancer Type |
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Sex-biased sQTL regulation of gene |
| Sex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTL | Description |
| Male-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
| Female-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
| Opposite sex-biased sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Male Effect | Male FDR | Female Effect | Female FDR | Cancer Type |
Top |
Sex-biased sQTM regulation of gene |
| Sex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTM | Description |
| Male-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
| Female-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
| Opposite sex-biased sQTM regulation. |
| EX ID | EX Info | Skipped Exon | CPG Site | CPG Position | CPG Island | Position to EX Events | Male Effect | Male FDR | Female Effect | Female FDR | Male Correlation | Male P-value | Female Correlation | Female P-value | ORF_anno | Cancer Type |
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Related disease information of RAB3GAP1 |
| Diseases associated with this gene (DisGeNET). |
| Gene ID | Gene Symbol | Disease ID | Disease Name | Number of PMID | Source |
| ENSG00000115839 | RAB3GAP1 | C1838625 | Warburg Sjo Fledelius syndrome | 1 | CTD_human |
