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Gene: ENSG00000105559 |
Summary for PLEKHA4 |
Gene summary |
| Gene information | Ensembl ID | ENSG00000105559 | Gene symbol | PLEKHA4 |
| Gene name | pleckstrin homology domain containing A4 | |
| HGNC | 14339 | |
| Entrez ID | 57664 | |
| Gene type | protein_coding | |
| Synonyms | PLEKHA4|PEPP1 | |
| UniProtAcc | Q9H4M7 |
Drugs associated with this gene(DrugBank). |
| Gene ID | Gene Symbol | Drug ID | Drug Name | Drug Type |
| ENSG00000105559 | PLEKHA4 | DB01863 | Inositol 1,3,4,5-Tetrakisphosphate | SmallMoleculeDrug |
Cancer therapeutic drugs associated with this gene(NCI). |
| Gene ID | Gene Name | Drug ID | Drug Name | Drug Type | Cancer |
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Structure and expression level for PLEKHA4 |
AS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.∗For more information on exon skipping events please check the ExonskipDB database. ∗For more information on exon skipping events please check the CAeditome database. |
Landscape of gene expressions across multiple cancer types. |
Differentially expressed gene analysis between tumor male and tumor female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
Differentially expressed gene analysis between tumor male and normal male samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
| PLEKHA4 | 1.09e+03 | -1.10e+00 | 3.93e-01 | -2.81e+00 | 4.99e-03 | 1.31e-02 | BLCA |
Differentially expressed gene analysis between tumor female and normal female samples. |
| Coding Name | Base Mean | log2FoldChange | lfcSE | Stat | P value | P.adjust Value | Cancer Type |
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Sex-biased somatic mutation for PLEKHA4 |
| ∗For more information on exon skipping events please check the ExonskipDB database. |
| Gene ID | Cancer Type | Hugo Symbol | Male | Female | pval | or | ci.up | ci.low | adjPval |
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DNA methylation with beta values for PLEKHA4 |
Landscape of DNA methylation across multiple cancer types. |
Differentially expressed CpG sites between male tumor and female tumor patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| GBM | cg01093065 | chr19:48868844 | CGI:chr19:48872227-48872671 | promoter | 4.40e-01 | 5.40e-01 | -2.79e+00 | 5.24e-03 | 1.59e-02 | -1.00e-01 |
Differentially expressed CpG sites between male tumor and male normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| KIRC | cg01093065 | chr19:48868844 | CGI:chr19:48872227-48872671 | promoter | 4.51e-01 | 6.18e-01 | -5.45e+00 | 5.05e-08 | 2.79e-07 | -1.66e-01 |
| LUSC | cg06339706 | chr19:48868028 | CGI:chr19:48872227-48872671 | promoter,gene body | 4.97e-01 | 6.21e-01 | -2.28e+00 | 2.26e-02 | 2.63e-02 | -1.24e-01 |
| LUSC | cg01093065 | chr19:48868844 | CGI:chr19:48872227-48872671 | promoter | 4.98e-01 | 6.16e-01 | -2.86e+00 | 4.25e-03 | 7.22e-03 | -1.17e-01 |
| COAD | cg06339706 | chr19:48868028 | CGI:chr19:48872227-48872671 | promoter,gene body | 3.61e-01 | 4.96e-01 | -3.72e+00 | 1.96e-04 | 6.00e-04 | -1.35e-01 |
| LIHC | cg01093065 | chr19:48868844 | CGI:chr19:48872227-48872671 | promoter | 5.51e-01 | 6.72e-01 | -3.73e+00 | 1.88e-04 | 3.62e-04 | -1.22e-01 |
| CHOL | cg01093065 | chr19:48868844 | CGI:chr19:48872227-48872671 | promoter | 4.91e-01 | 6.91e-01 | -2.65e+00 | 7.96e-03 | 1.92e-02 | -2.01e-01 |
Differentially expressed CpG sites between female tumor and female normal patients. |
| Cancer Type | CpG Site | Position | CpG Island | Position to Gene | ave1 | ave2 | wilcoxon.w | wilcoxon.p | padj | dBeta |
| BRCA | cg06705122 | chr19:48867822 | CGI:chr19:48872227-48872671 | promoter,gene body | 4.84e-01 | 3.68e-01 | 5.79e+00 | 7.03e-09 | 1.59e-08 | 1.16e-01 |
| BRCA | cg06339706 | chr19:48868028 | CGI:chr19:48872227-48872671 | promoter,gene body | 5.33e-01 | 4.16e-01 | 4.73e+00 | 2.22e-06 | 3.99e-06 | 1.17e-01 |
| BRCA | cg01093065 | chr19:48868844 | CGI:chr19:48872227-48872671 | promoter | 5.41e-01 | 4.11e-01 | 8.65e+00 | 5.34e-18 | 2.45e-17 | 1.30e-01 |
| BRCA | cg08077345 | chr19:48869016 | CGI:chr19:48872227-48872671 | promoter | 7.93e-01 | 6.09e-01 | 1.18e+01 | 2.40e-32 | 4.72e-31 | 1.84e-01 |
| BRCA | cg23002721 | chr19:48869351 | CGI:chr19:48872227-48872671 | promoter | 7.41e-01 | 5.54e-01 | 1.30e+01 | 1.64e-38 | 9.16e-37 | 1.87e-01 |
| KIRC | cg06339706 | chr19:48868028 | CGI:chr19:48872227-48872671 | promoter,gene body | 5.04e-01 | 3.76e-01 | 2.30e+00 | 2.13e-02 | 2.81e-02 | 1.28e-01 |
| HNSC | cg06705122 | chr19:48867822 | CGI:chr19:48872227-48872671 | promoter,gene body | 4.47e-01 | 3.23e-01 | 2.42e+00 | 1.55e-02 | 2.37e-02 | 1.24e-01 |
| HNSC | cg06339706 | chr19:48868028 | CGI:chr19:48872227-48872671 | promoter,gene body | 4.78e-01 | 3.36e-01 | 2.42e+00 | 1.55e-02 | 2.37e-02 | 1.42e-01 |
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Exon skipping events with PSI in TCGA for PLEKHA4 |
| ∗Please access ExonSkipDB for exon skipping annotation. |
Landscape of exon skipping events across multiple cancer types. |
Differentially expressed exon skipping events between male tumor and female tumor patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
Differentially expressed exon skipping events between male tumor and male normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
| LUSC | exon_skip_320509 | 5.75e-01 | 6.78e-01 | -4.10e+00 | 4.08e-05 | 1.30e-04 | -1.03e-01 |
| STAD | exon_skip_320509 | 6.02e-01 | 7.28e-01 | -4.56e+00 | 5.06e-06 | 1.86e-04 | -1.26e-01 |
| ESCA | exon_skip_320509 | 5.75e-01 | 7.23e-01 | -3.28e+00 | 1.02e-03 | 1.01e-02 | -1.48e-01 |
| CHOL | exon_skip_320509 | 6.55e-01 | 7.60e-01 | -2.10e+00 | 3.56e-02 | 3.83e-02 | -1.05e-01 |
Differentially expressed exon skipping events between female tumor and female normal patients. |
| Cancer Type | Exon Skipping | ave.female_T | ave.female_N | wilcoxon.w | wilcoxon.p | padj | dPSI |
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RNA A-to-I editing events in TCGA for PLEKHA4 |
| ∗Please access CAeditome for RNA editing annotation. |
Differentially expressed RNA editing events between male tumor and female tumor patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
Differentially expressed RNA editing events between male tumor and male normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
Differentially expressed RNA editing events between female tumor and female normal patients. |
| Cancer Type | Transcript | Editing | ave.male_T | ave.female_T | wilcoxon.w | wilcoxon.p | p_adj | dFre |
Protein coding RNA editing(s). |
| Editing Position | Variant Type | Gene Symbol | Transcript ID | NTchange | AAchange |
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Sex-biased TF-Gene network for PLEKHA4 |
TFs related to PLEKHA4.∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
| Cancer Type | TF | Target Gene | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| BRCA | PLAGL2 | PLEKHA4 | 3.21e+00 | 7.20e-03 | 4.52e+00 | 9.83e-01 | Female-biased |
PLEKHA4 related gene.∗Only the gene encode TF might with this result. ∗For more information please check Sex-biased TF-Coding gene network. |
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Sex-biased RBP-ES network for PLEKHA4 |
RBPs related to ES in PLEKHA4.∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98. ∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98. |
| Cancer Type | RBP | Target ES | Male Edge Score | Male Edge Threshold | Female Edge Score | Female Edge Threshold | Type |
| PAAD | CNOT4 | exon_skip_320524 | 7.87e+00 | 9.88e-01 | 7.47e+00 | 2.78e-03 | Male-biased |
| SKCM | SAMD4A | exon_skip_320594 | 6.91e+00 | 5.85e-03 | 7.32e+00 | 9.83e-01 | Female-biased |
PLEKHA4 related ES.∗Only the gene encode RBP might with this result. ∗For more information please check Sex-biased RBP-ES network in cancer. |
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Sex-biased CeRNA regulation of gene |
Sex-biased CeRNA regulation of gene. |
| Gene ID | ceRNA(lncRNA-miRNA-mRNA) | Group | Cancer Type |
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Sex-biased eQTL regulation of gene |
Sex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| eQTL | Description |
Male-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs112986969 | chr19:42784842:C:T | - | 0.180063618565209 | 0.0130000932573836 | HNSC | Female-baised eQTL |
| rs7258435 | chr19:42761383:G:T | - | 0.179795953616283 | 0.0136188965549775 | HNSC | Female-baised eQTL |
| rs11883065 | chr19:42761532:C:T | - | 0.179795953616283 | 0.0136188965549775 | HNSC | Female-baised eQTL |
| rs7256456 | chr19:42764064:T:G | - | 0.179795953616283 | 0.0136188965549775 | HNSC | Female-baised eQTL |
| rs112554805 | chr19:42768929:G:A | - | 0.179795953616283 | 0.0136188965549775 | HNSC | Female-baised eQTL |
| rs79112476 | chr19:42771379:T:C | - | 0.179795953616283 | 0.0136188965549775 | HNSC | Female-baised eQTL |
| rs189302496 | chr19:42772153:T:C | - | 0.179795953616283 | 0.0136188965549775 | HNSC | Female-baised eQTL |
| rs58730077 | chr19:42775242:G:A | - | 0.179795953616283 | 0.0136188965549775 | HNSC | Female-baised eQTL |
| rs74658509 | chr19:42777364:G:C | - | 0.179795953616283 | 0.0136188965549775 | HNSC | Female-baised eQTL |
| rs75697030 | chr19:42778228:G:C | - | 0.179795953616283 | 0.0136188965549775 | HNSC | Female-baised eQTL |
| rs11883187 | chr19:42778994:C:A | - | 0.179795953616283 | 0.0136188965549775 | HNSC | Female-baised eQTL |
| rs61615006 | chr19:42779376:A:G | - | 0.179795953616283 | 0.0136188965549775 | HNSC | Female-baised eQTL |
| rs59559305 | chr19:42779471:G:A | - | 0.179795953616283 | 0.0136188965549775 | HNSC | Female-baised eQTL |
| rs78457465 | chr19:42779533:G:A | - | 0.179795953616283 | 0.0136188965549775 | HNSC | Female-baised eQTL |
| rs112836480 | chr19:42779604:C:A | - | 0.179795953616283 | 0.0136188965549775 | HNSC | Female-baised eQTL |
| rs112142289 | chr19:42783065:C:T | - | 0.178980412941305 | 0.014687330128885 | HNSC | Female-baised eQTL |
| rs181804582 | chr19:42762059:A:G | - | 0.178592434926447 | 0.0155295315663902 | HNSC | Female-baised eQTL |
| rs189433120 | chr19:42762058:C:T | - | 0.178438619792993 | 0.0213692412991514 | HNSC | Female-baised eQTL |
| rs28692597 | chr19:42742860:C:G | - | 0.176552761582243 | 0.0254127184659365 | HNSC | Female-baised eQTL |
| rs139202033 | chr19:42664843:T:G | - | 0.15600721125464 | 0.0429105735645227 | HNSC | Female-baised eQTL |
| rs75692118 | chr19:42665050:T:G | - | 0.15600721125464 | 0.0429105735645227 | HNSC | Female-baised eQTL |
| rs74441330 | chr19:42711349:T:A | - | 0.157315327917606 | 0.0462824421077032 | HNSC | Female-baised eQTL |
| rs58707411 | chr19:42724888:T:A | - | 0.157315327917606 | 0.0462824421077032 | HNSC | Female-baised eQTL |
| rs33998354 | chr19:50628840:T:C | - | 0.183424337867238 | 6.18708950017986e-09 | LGG | Female-baised eQTL |
| rs10414770 | chr19:50631041:C:T | - | 0.151644558849903 | 5.23859442050137e-07 | LGG | Female-baised eQTL |
| rs10416270 | chr19:50631535:G:T | - | 0.151644558849903 | 5.23859442050137e-07 | LGG | Female-baised eQTL |
| rs79494056 | chr19:48183370:G:A | - | 0.0901338851016833 | 0.0341177137640238 | LGG | Female-baised eQTL |
| rs10416495 | chr19:39821472:T:C | - | 0.0555463749331099 | 0.0285378424042216 | LUAD | Female-baised eQTL |
| rs56047603 | chr19:39821036:T:C | - | 0.0551934478385888 | 0.0310967721635831 | LUAD | Female-baised eQTL |
Female-specific eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Effect Score | FDR | Cancer Type | Biased Type |
| rs4500872 | chr19:40916466:C:T | - | -0.137886160990355 | 0.0484190991646513 | THCA | Male-baised eQTL |
| rs12459565 | chr19:40921634:G:C | - | -0.137886160990355 | 0.0484190991646513 | THCA | Male-baised eQTL |
| rs7257558 | chr19:41894908:C:G | - | 0.109877234943106 | 0.0118532424599165 | STAD | Male-baised eQTL |
| rs12609822 | chr19:41646867:T:A | - | 0.0555756947971537 | 0.0421943792794567 | STAD | Male-baised eQTL |
| rs2109074 | chr19:41642653:A:G | - | 0.0547122258762749 | 0.0485662659683215 | STAD | Male-baised eQTL |
| rs60613767 | chr19:41646695:C:G | - | 0.0547122258762749 | 0.0485662659683215 | STAD | Male-baised eQTL |
| rs12610950 | chr19:41646819:C:A | - | 0.0547122258762749 | 0.0485662659683215 | STAD | Male-baised eQTL |
| rs2109075 | chr19:41648308:C:T | - | 0.0547122258762749 | 0.0485662659683215 | STAD | Male-baised eQTL |
| rs2109076 | chr19:41648384:G:A | - | 0.0547122258762749 | 0.0485662659683215 | STAD | Male-baised eQTL |
| rs8113799 | chr19:41649337:G:A | - | 0.0547122258762749 | 0.0485662659683215 | STAD | Male-baised eQTL |
| rs2569652 | chr19:40098880:C:A | - | 0.0912898649351194 | 0.00282196655933525 | COAD | Male-baised eQTL |
| rs12985743 | chr19:40163116:A:G | - | 0.088994153798812 | 0.00289106190154508 | COAD | Male-baised eQTL |
| rs521783 | chr19:40164288:A:G | - | 0.088994153798812 | 0.00289106190154508 | COAD | Male-baised eQTL |
| rs186816 | chr19:40088753:C:T | - | 0.0872386598815125 | 0.00359130470155676 | COAD | Male-baised eQTL |
| rs546453 | chr19:40164669:T:C | - | 0.0871464856863495 | 0.00396527196977547 | COAD | Male-baised eQTL |
| rs1654620 | chr19:40165303:A:G | - | 0.0871464856863495 | 0.00396527196977547 | COAD | Male-baised eQTL |
| rs656650 | chr19:40166912:G:A | - | 0.0871464856863495 | 0.00396527196977547 | COAD | Male-baised eQTL |
| rs509354 | chr19:40170895:G:A | - | 0.0854326791181487 | 0.00413172898489605 | COAD | Male-baised eQTL |
| rs508531 | chr19:40170831:T:A | - | 0.0855510346222859 | 0.0041850076340987 | COAD | Male-baised eQTL |
| rs7249286 | chr19:40044860:C:T | - | 0.0812143133977943 | 0.0244851264725578 | COAD | Male-baised eQTL |
| rs1029838 | chr19:56737070:G:A | - | -0.0672712079869381 | 0.0290480868923787 | COAD | Male-baised eQTL |
| rs60814129 | chr19:43606491:C:A | - | 0.150275346279236 | 0.0307294483239415 | COAD | Male-baised eQTL |
| rs11878990 | chr19:39755436:A:G | - | 0.0912949650637713 | 0.0319556374300167 | COAD | Male-baised eQTL |
| rs2162890 | chr19:53336756:G:T | - | 0.10645534693428 | 0.0337653398184807 | COAD | Male-baised eQTL |
| rs12610904 | chr19:39748136:G:A | - | 0.0925519486393469 | 0.0363094682190392 | COAD | Male-baised eQTL |
| rs11669501 | chr19:39749007:T:C | - | -0.0689047805027594 | 0.0374908572208323 | COAD | Male-baised eQTL |
| rs11666142 | chr19:39749314:A:G | - | -0.0689047805027594 | 0.0374908572208323 | COAD | Male-baised eQTL |
| rs11666190 | chr19:39749354:C:A | - | -0.0689047805027594 | 0.0374908572208323 | COAD | Male-baised eQTL |
| rs978671 | chr19:39758269:A:G | - | -0.0680066616142359 | 0.0416127062047076 | COAD | Male-baised eQTL |
| rs11083616 | chr19:41359738:G:A | - | -0.0641996635027139 | 0.0437689229270343 | COAD | Male-baised eQTL |
Opposite sex-biased eQTL regulation. |
| SNP ID | SNP Info | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Sex-biased Gene in Cancer | Cancer Type |
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Sex-biased eQTM regulation of gene |
Sex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table). |
| eQTM | Description |
Male-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
Female-specific eQTM regulation. |
| CpG Site | CpG Postion | Position to Gene | Effect Score | FDR | Cor.r | Cor.Pvalue | Cancer Type |
Opposite sex-biased eQTM regulation. |
| CpG Site | CpG Postion | CpG Island | Position to Gene | Male Effect | Male FDR | Female Effect | Female FDR | Male Cor | Male P-value | Female Cor | Female P-value | Sex-biased Coding Gene | Cancer Type |
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Sex-biased sQTL regulation of gene |
Sex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
Male-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs4801779 | chr19:48903394:T:G | Distant upstream | 0.0476241416046893 | 4.33146351057622e-06 | LUAD | Female-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs4802522 | chr19:48906934:G:T | Distant upstream | 0.0494526873417301 | 4.40067249066992e-06 | LUAD | Female-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs28520944 | chr19:48902413:C:T | Distant upstream | 0.0477411099845113 | 5.05984583395408e-06 | LUAD | Female-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs10404905 | chr19:48902918:A:T | Distant upstream | 0.0469097778705493 | 5.40686487946871e-06 | LUAD | Female-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs112370206 | chr19:48893366:C:T | Distant upstream | 0.0436925651903634 | 0.000359628637321765 | LUAD | Female-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs7254122 | chr19:48892416:A:C | Distant upstream | 0.0434047097262803 | 0.000424185709986424 | LUAD | Female-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs9941490 | chr19:48893480:G:A | Distant upstream | 0.0434047097262803 | 0.000424185709986424 | LUAD | Female-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs28787645 | chr19:48894247:C:G | Distant upstream | 0.0434047097262803 | 0.000424185709986424 | LUAD | Female-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs12461075 | chr19:48896564:G:A | Distant upstream | 0.0432264548285261 | 0.000443463493767091 | LUAD | Female-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs7254608 | chr19:48892517:G:T | Distant upstream | 0.0433682272823251 | 0.000611363628910357 | LUAD | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs8109984 | chr19:48166902:T:C | Distant downstream | -0.0237844385254043 | 0.00455088274307666 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs2386522 | chr19:48166015:T:C | Distant downstream | -0.0224237783189851 | 0.00925802196636012 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs71355800 | chr19:48100780:A:T | Distant downstream | -0.0275980920365149 | 0.00939349780808924 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs66617162 | chr19:48100798:T:C | Distant downstream | -0.0275980920365149 | 0.00939349780808924 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs7252136 | chr19:48100977:T:C | Distant downstream | -0.0269606994197898 | 0.0109765692077591 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs59266888 | chr19:48100871:G:A | Distant downstream | -0.0269091818310977 | 0.0115272499742267 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs34430527 | chr19:48163201:T:A | Distant downstream | -0.0218958767907871 | 0.0119582302528053 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs12979997 | chr19:48163583:C:T | Distant downstream | -0.0218958767907871 | 0.0119582302528053 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs3730850 | chr19:48165452:A:G | Distant downstream | -0.0214326225889558 | 0.0153843787195914 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs20580 | chr19:48151296:G:T | Distant downstream | -0.0222119063696563 | 0.0159373240324775 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs10424875 | chr19:48167553:A:G | Distant downstream | -0.0214275639711842 | 0.0160906809800339 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs10426471 | chr19:48168332:A:C | Distant downstream | -0.0214275639711842 | 0.0160906809800339 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs4801750 | chr19:48168885:G:A | Distant downstream | -0.0214275639711842 | 0.0160906809800339 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs2007183 | chr19:48182841:G:T | Distant downstream | -0.0295550262067379 | 0.0196888486065632 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs2007182 | chr19:48182815:G:A | Distant downstream | -0.0291936107840888 | 0.0223283271932096 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs2007184 | chr19:48182888:G:T | Distant downstream | -0.0298119138636862 | 0.0236882713428509 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs3730895 | chr19:48153314:T:G | Distant downstream | -0.0211682807890201 | 0.0297957020305029 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs2386521 | chr19:48166117:T:C | Distant downstream | -0.0198379850611099 | 0.0343752490520622 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs12463269 | chr19:48167818:C:T | Distant downstream | -0.0198228767432401 | 0.0358470622705961 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs2163619 | chr19:48155675:A:G | Distant downstream | -0.0204701945837013 | 0.041854074860762 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs754380 | chr19:48183674:G:T | Distant downstream | -0.0285318493486633 | 0.043131735355029 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs10420285 | chr19:48159836:T:G | Distant downstream | -0.0196426241309034 | 0.0465343550910679 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs411073 | chr19:48138317:A:G | Distant downstream | -0.0202673563939979 | 0.0498984838536965 | THCA | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs11671610 | chr19:48953023:T:A | Distant upstream | 0.109930181902832 | 0.0283763246185366 | GBM | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs3817074 | chr19:48955955:A:G | Distant upstream | 0.121802171643725 | 0.0337167472399534 | GBM | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs1974820 | chr19:48957466:A:G | Distant upstream | 0.121802171643725 | 0.0337167472399534 | GBM | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs11668008 | chr19:48956796:T:C | Distant upstream | 0.121157375568286 | 0.0406207090699796 | GBM | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs11667351 | chr19:48952897:G:T | Distant upstream | 0.117905662640751 | 0.0465884436027481 | GBM | Female-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs4645878 | chr19:48954681:A:G | Distant upstream | 0.117905662640751 | 0.0465884436027481 | GBM | Female-baised sQTL |
Female-specific sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Effect Score | FDR | Cancer Type | Biased Type |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs73063515 | chr19:48904458:C:T | Distant upstream | -0.0735950684415681 | 3.48858664422886e-08 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs73063523 | chr19:48905686:T:C | Distant upstream | -0.0735950684415681 | 3.48858664422886e-08 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs17272707 | chr19:48901278:T:G | Distant upstream | -0.0735008324974707 | 3.75584268301127e-08 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs116909499 | chr19:48904476:C:T | Distant upstream | -0.0735008324974707 | 3.75584268301127e-08 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs150664301 | chr19:48904690:A:G | Distant upstream | -0.0735008324974707 | 3.75584268301127e-08 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs73063522 | chr19:48905101:C:G | Distant upstream | -0.0735008324974707 | 3.75584268301127e-08 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs73063524 | chr19:48905747:T:C | Distant upstream | -0.0735008324974707 | 3.75584268301127e-08 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs1058483 | chr19:48904403:G:A | Distant upstream | -0.0725713915147074 | 5.62095853820296e-08 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs117744769 | chr19:48899429:G:T | Distant upstream | -0.071249173706679 | 2.21202984880083e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs56147696 | chr19:48898891:C:T | Distant upstream | -0.0711753014083523 | 2.27882024745375e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs17272700 | chr19:48888513:G:A | Distant upstream | -0.0710621504059664 | 2.32930015288896e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs56317021 | chr19:48892703:C:T | Distant upstream | -0.0710621504059664 | 2.32930015288896e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs142640783 | chr19:48894093:C:A | Distant upstream | -0.0710621504059664 | 2.32930015288896e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs55764400 | chr19:48884500:G:A | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs73061689 | chr19:48893957:C:T | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs141616008 | chr19:48895683:C:G | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs73061692 | chr19:48896419:T:C | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs73061693 | chr19:48896684:C:A | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs73061694 | chr19:48896721:T:C | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs73061695 | chr19:48896731:T:C | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs73061697 | chr19:48896743:C:T | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs117016425 | chr19:48896959:C:T | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs73061699 | chr19:48897254:T:C | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs56149557 | chr19:48898127:C:A | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs55981795 | chr19:48898695:A:C | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs151313779 | chr19:48899230:C:T | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs73063505 | chr19:48899508:T:C | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs56349331 | chr19:48899752:T:A | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs55756106 | chr19:48899798:A:G | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs55737338 | chr19:48899884:A:G | Distant upstream | -0.0709637307959802 | 2.48715907689107e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs56146968 | chr19:48895590:A:G | Distant upstream | -0.0706800532866989 | 3.00929462026938e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs1466896 | chr19:48881996:C:G | Distant upstream | -0.0699167107646204 | 4.30502564956994e-07 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs4802519 | chr19:48890470:A:T | Distant upstream | -0.0699487429712225 | 1.25682837279759e-06 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs3760785 | chr19:48899921:G:T | Distant upstream | -0.0613688847568433 | 4.10570905801515e-05 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs607356 | chr19:48867984:T:C | Distant upstream | -0.0409319526426361 | 0.000202554242454026 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs4801779 | chr19:48903394:T:G | Distant upstream | -0.0405130616503296 | 0.00120362754614993 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs28520944 | chr19:48902413:C:T | Distant upstream | -0.0407136042634312 | 0.00122232961599056 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs10404905 | chr19:48902918:A:T | Distant upstream | -0.0399332583017891 | 0.00140489390866027 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs4802522 | chr19:48906934:G:T | Distant upstream | -0.0405139113393429 | 0.00155717195703168 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs12461075 | chr19:48896564:G:A | Distant upstream | -0.0392725738021429 | 0.00240277298186117 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs7254122 | chr19:48892416:A:C | Distant upstream | -0.0391886239844185 | 0.00342855432963172 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs28787645 | chr19:48894247:C:G | Distant upstream | -0.0391886239844185 | 0.00342855432963172 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs112370206 | chr19:48893366:C:T | Distant upstream | -0.038791249507117 | 0.00416907063644029 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs9941490 | chr19:48893480:G:A | Distant upstream | -0.038791249507117 | 0.00416907063644029 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs57301724 | chr19:48899075:C:T | Distant upstream | -0.0380683150009758 | 0.00446688798233151 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs3826817 | chr19:48898187:C:T | Distant upstream | -0.0371416514617103 | 0.00631036992590255 | KIRC | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs10401443 | chr19:48898802:C:A | Distant upstream | -0.0371416514617103 | 0.00631036992590255 | KIRC | Male-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs7254122 | chr19:48892416:A:C | Distant upstream | 0.0275020337776202 | 0.0110744994736701 | KIRC | Male-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs7254608 | chr19:48892517:G:T | Distant upstream | 0.0272518713190865 | 0.0129017949301255 | KIRC | Male-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs112370206 | chr19:48893366:C:T | Distant upstream | 0.0272518713190865 | 0.0129017949301255 | KIRC | Male-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs9941490 | chr19:48893480:G:A | Distant upstream | 0.0272518713190865 | 0.0129017949301255 | KIRC | Male-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs3786738 | chr19:48212930:T:C | Distant downstream | -0.0307786202659704 | 0.0172698810175624 | KIRC | Male-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs1968441 | chr19:48208532:T:G | Distant downstream | -0.0329793628810311 | 0.044202501511136 | KIRC | Male-baised sQTL |
| exon_skip_320526 | chr19:48857421:48857496 | In-frame | rs34388885 | chr19:48379580:T:A | Distant downstream | -0.047337506333017 | 0.0318827726356407 | COAD | Male-baised sQTL |
| exon_skip_320509 | chr19:48839204:48839263 | Frame-shift | rs4347731 | chr19:48881897:A:G | Distant upstream | -0.0775443044028566 | 0.00107385907702346 | BLCA | Male-baised sQTL |
Opposite sex-biased sQTL regulation. |
| ES ID | Skipped Exon | ORF Anno | SNP ID | SNP Info | SNP Position to ES | Male Effect | Male FDR | Female Effect | Female FDR | Cancer Type |
Top |
Sex-biased sQTM regulation of gene |
Sex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table). |
| sQTM | Description |
Male-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
Female-specific sQTM regulation. |
| EX ID | Skipped Exon | CPG Site | CPG Position | Position to EX Events | Effect Score | FDR | Cor.r | Cor.Pvalue | ORF_anno | Cancer Type |
Opposite sex-biased sQTM regulation. |
| EX ID | EX Info | Skipped Exon | CPG Site | CPG Position | CPG Island | Position to EX Events | Male Effect | Male FDR | Female Effect | Female FDR | Male Correlation | Male P-value | Female Correlation | Female P-value | ORF_anno | Cancer Type |
Top |
Related disease information of PLEKHA4 |
Diseases associated with this gene (DisGeNET). |
| Gene ID | Gene Symbol | Disease ID | Disease Name | Number of PMID | Source |