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Center for Computational Systems Medicine
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Gene summary

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Gene structure and Gene expression level

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Sex-biased somatic mutation

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DNA methylation with beta values in gene

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Exon skipping events with PSI in TCGA

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RNA A-to-I editing events in TCGA

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Sex-biased TF-Gene network of gene

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Sex-biased RBP-ES network of gene

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Sex-biased CeRNA regulation of gene

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Sex-biased eQTL regulation of gene

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Sex-biased eQTM regulation of gene

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Sex-biased sQTL regulation of gene

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Sex-biased sQTM regulation of gene

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Related disease information of gene

Gene: ENSG00000105443

Summary for CYTH2

check button Gene summary

Gene informationEnsembl ID

ENSG00000105443

Gene symbol

CYTH2

Gene namecytohesin 2
HGNC

9502

Entrez ID

9266

Gene typeprotein_coding
SynonymsCYTH2|CTS18.1|Sec7p-L|ARNO|Sec7p-like|cytohesin-2
UniProtAcc

Q99418


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type
ENSG00000105443CYTH2DB01863Inositol 1,3,4,5-TetrakisphosphateSmallMoleculeDrug
ENSG00000105443CYTH2DB01942Formic acidSmallMoleculeDrug
ENSG00000105443CYTH2DB034011D-myo-inositol 1,4,5-trisphosphateSmallMoleculeDrug
ENSG00000105443CYTH2DB04530S,S-(2-Hydroxyethyl)ThiocysteineSmallMoleculeDrug
ENSG00000105443CYTH2DB07348Brefeldin ASmallMoleculeDrug

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

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Structure and expression level for CYTH2

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
CYTH23.99e+031.73e+002.60e-016.63e+003.44e-116.52e-10CHOL

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

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Sex-biased somatic mutation for CYTH2

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

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DNA methylation with beta values for CYTH2

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

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Exon skipping events with PSI in TCGA for CYTH2

∗Please access ExonSkipDB for exon skipping annotation.
check buttonLandscape of exon skipping events across multiple cancer types.
AS event heatmap

check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

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RNA A-to-I editing events in TCGA for CYTH2

∗Please access CAeditome for RNA editing annotation.
check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

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Sex-biased TF-Gene network for CYTH2

check buttonTFs related to CYTH2.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
TF Gene
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
BRCACTCFLCYTH22.74e+003.60e-034.27e+009.81e-01Female-biased
BRCANR1H4CYTH22.80e+002.94e-034.40e+009.85e-01Female-biased
BRCAPATZ1CYTH22.72e+002.91e-034.32e+009.83e-01Female-biased
BRCAPLAG1CYTH22.75e+002.08e-034.46e+009.87e-01Female-biased
BRCAPLAGL2CYTH22.92e+007.77e-044.95e+009.95e-01Female-biased
BRCASNAI1CYTH22.67e+002.20e-034.36e+009.85e-01Female-biased
BRCATCF12CYTH22.61e+002.65e-034.23e+009.81e-01Female-biased
BRCATCF3CYTH22.70e+002.08e-034.41e+009.86e-01Female-biased
BRCATFAP2ACYTH22.90e+004.23e-034.38e+009.83e-01Female-biased
BRCATFAP2BCYTH22.94e+003.41e-034.49e+009.86e-01Female-biased
BRCATFAP2CCYTH22.87e+004.56e-034.33e+009.82e-01Female-biased
BRCAZFXCYTH22.56e+001.89e-034.29e+009.84e-01Female-biased
BRCAZIC2CYTH22.53e+001.99e-034.24e+009.82e-01Female-biased
BRCAZNF141CYTH22.83e+002.56e-034.47e+009.87e-01Female-biased
BRCAZNF19CYTH22.90e+005.18e-034.31e+009.81e-01Female-biased
BRCAZNF264CYTH22.86e+003.50e-034.40e+009.84e-01Female-biased
BRCAZNF28CYTH22.89e+002.60e-034.52e+009.88e-01Female-biased
BRCAZNF333CYTH22.70e+002.24e-034.38e+009.85e-01Female-biased
BRCAZNF431CYTH22.93e+005.65e-034.31e+009.80e-01Female-biased
BRCAZNF454CYTH22.65e+001.88e-034.39e+009.86e-01Female-biased
BRCAZNF605CYTH22.72e+002.85e-034.33e+009.84e-01Female-biased
BRCAZNF619CYTH22.72e+003.64e-034.24e+009.80e-01Female-biased
BRCAZNF692CYTH22.73e+001.91e-034.46e+009.88e-01Female-biased
BRCAZNF707CYTH22.77e+003.65e-034.29e+009.82e-01Female-biased
BRCAZNF816CYTH22.89e+004.92e-034.31e+009.81e-01Female-biased
BRCAZNF891CYTH22.88e+003.87e-034.38e+009.84e-01Female-biased

check buttonCYTH2 related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

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Sex-biased RBP-ES network for CYTH2

check buttonRBPs related to ES in CYTH2.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
RBP ES
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
THYMSTAR-PAPexon_skip_3088841.41e+019.99e-011.35e+013.05e-04Male-biased
LUADSTAR-PAPexon_skip_3088841.33e+011.10e-031.38e+019.99e-01Female-biased
ESCASTAR-PAPexon_skip_3088841.29e+012.09e-031.36e+019.98e-01Female-biased
THCASTAR-PAPexon_skip_3088841.36e+011.00e+001.30e+012.55e-04Male-biased
PCPGSTAR-PAPexon_skip_3088841.39e+019.99e-011.34e+019.65e-04Male-biased
GBMPABPC3exon_skip_3088847.14e+007.43e-037.51e+009.82e-01Female-biased
GBMSTAR-PAPexon_skip_3088841.30e+011.19e-031.36e+019.99e-01Female-biased
KIRCSTAR-PAPexon_skip_3088841.36e+019.99e-011.30e+014.16e-04Male-biased
BLCAPABPC3exon_skip_3088847.14e+008.17e-037.51e+009.81e-01Female-biased
BLCASTAR-PAPexon_skip_3088841.35e+013.69e-031.39e+019.96e-01Female-biased
SKCMSTAR-PAPexon_skip_3088841.32e+011.96e-031.37e+019.98e-01Female-biased

check buttonCYTH2 related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

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Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

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Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs431509chr19:43991918:A:G-0.1988243708485740.00199326202459369PAADFemale-baised eQTL
rs77591211chr19:43527989:G:A-0.1693698170773530.0370295731145491LUSCFemale-baised eQTL
rs116523531chr19:43528059:C:A-0.1684454998511840.0398923959309265LUSCFemale-baised eQTL
rs147180609chr19:54581667:G:A-0.168341679819820.0363760484656264STADFemale-baised eQTL
rs2301139chr19:48630504:C:T-0.1346974696221090.0380889886267181STADFemale-baised eQTL
rs73581714chr19:48646873:G:T-0.1367662744046920.0417856202639763STADFemale-baised eQTL
rs7255644chr19:48644237:G:C-0.1349199897268720.0427883524592503STADFemale-baised eQTL
rs12608544chr19:48633394:G:A-0.1308284649854230.0494531409826043STADFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs199561785chr19:40086136:G:A-0.07734315905082880.0104872323344697COADMale-baised eQTL
rs200915600chr19:40086137:G:A-0.07734315905082880.0104872323344697COADMale-baised eQTL
rs58440570chr19:40086145:C:G-0.07734315905082880.0104872323344697COADMale-baised eQTL
rs10422573chr19:42624112:A:T-0.05166555560676230.0142359210918704COADMale-baised eQTL
rs10407178chr19:42613332:A:G-0.05142887231367580.0149389840616633COADMale-baised eQTL
rs10421620chr19:42614992:G:A-0.05142887231367580.0149389840616633COADMale-baised eQTL
rs8110766chr19:42615067:C:T-0.05142887231367580.0149389840616633COADMale-baised eQTL
rs10420164chr19:42620321:G:T-0.05142887231367580.0149389840616633COADMale-baised eQTL
rs10414602chr19:42622817:A:G-0.05142887231367580.0149389840616633COADMale-baised eQTL
rs184264924chr19:42610306:T:C-0.04531232511520040.0178044696296643COADMale-baised eQTL
rs10413224chr19:42610468:T:C-0.0451741083424740.0184171147487969COADMale-baised eQTL
rs10415564chr19:42622978:G:C-0.0451741083424740.0184171147487969COADMale-baised eQTL
rs1859341chr19:42625292:A:G-0.04469359601363280.0199289084901146COADMale-baised eQTL
rs8106083chr19:42626528:G:A-0.04469359601363280.0199289084901146COADMale-baised eQTL
rs56237547chr19:42614354:T:A-0.04495232377714630.0199954436370406COADMale-baised eQTL
rs10421881chr19:42623789:A:G-0.04495232377714630.0199954436370406COADMale-baised eQTL
rs10411165chr19:42625777:G:A-0.04495232377714630.0199954436370406COADMale-baised eQTL
rs28447294chr19:42595206:C:T-0.04459793856784310.0216648365875203COADMale-baised eQTL
rs2267631chr19:42596477:G:A-0.04458299447201650.021870915351363COADMale-baised eQTL
rs3760707chr19:49581197:T:C-0.03885905176673630.0219100260841181COADMale-baised eQTL
rs3745474chr19:49583549:C:T-0.03885905176673630.0219100260841181COADMale-baised eQTL
rs7246110chr19:50757794:A:G-0.0366993856633530.02232103085358COADMale-baised eQTL
rs28698193chr19:42729897:A:T-0.0583789780409540.0226918334497925COADMale-baised eQTL
rs10411960chr19:42733224:G:A-0.0583789780409540.0226918334497925COADMale-baised eQTL
rs12185501chr19:42739099:G:A-0.0583789780409540.0226918334497925COADMale-baised eQTL
rs12185499chr19:42739114:C:T-0.0583789780409540.0226918334497925COADMale-baised eQTL
rs8103607chr19:42736544:A:G-0.05074578198372150.0230950659208304COADMale-baised eQTL
rs8110917chr19:42606030:T:C-0.04436685893776030.0236549231199372COADMale-baised eQTL
rs6509020chr19:42606811:C:G-0.04436685893776030.0236549231199372COADMale-baised eQTL
rs10403979chr19:42607515:T:C-0.04436685893776030.0236549231199372COADMale-baised eQTL
rs275583chr19:48347421:A:G--0.0377690238562140.0243230459004527COADMale-baised eQTL
rs7245984chr19:50757732:A:G-0.03638321505721780.0246526364544549COADMale-baised eQTL
rs28805620chr19:42707734:C:T-0.05433002922259630.0252080715505879COADMale-baised eQTL
rs10404522chr19:42740895:A:C-0.05785525054843690.0272060658645087COADMale-baised eQTL
rs10417693chr19:42630224:A:G-0.04286609857962810.0278053006015849COADMale-baised eQTL
rs10423701chr19:50193933:C:T-0.06867776456787450.029016964773546COADMale-baised eQTL
rs10425649chr19:50194117:T:C-0.06867776456787450.029016964773546COADMale-baised eQTL
rs8112472chr19:50194404:A:G-0.06867776456787450.029016964773546COADMale-baised eQTL
rs6509454chr19:50194630:G:A-0.06867776456787450.029016964773546COADMale-baised eQTL
rs10412188chr19:50195936:A:C-0.06867776456787450.029016964773546COADMale-baised eQTL
rs10413097chr19:50196298:A:G-0.06867776456787450.029016964773546COADMale-baised eQTL
rs58981804chr19:50196319:A:G-0.06867776456787450.029016964773546COADMale-baised eQTL
rs4802580chr19:49163298:T:C--0.04423878463530220.0296980123029431COADMale-baised eQTL
rs10407819chr19:42728896:G:C-0.05101451647410810.0297486795270767COADMale-baised eQTL
rs10413463chr19:50196247:G:A-0.06758307348039930.0297791872560795COADMale-baised eQTL
rs9304604chr19:42590909:G:A-0.04405114905011760.0306355718104414COADMale-baised eQTL
rs7247618chr19:42628269:T:C-0.04210924557283070.0321597961472013COADMale-baised eQTL
rs10417418chr19:42630018:C:G-0.04212130601113860.0339904739317957COADMale-baised eQTL
rs73057994chr19:49588016:C:A-0.03722330762913610.0344353960448046COADMale-baised eQTL
rs2288920chr19:49588541:G:T-0.03693510388666880.0344999881815568COADMale-baised eQTL
rs113205442chr19:49582170:G:A-0.03612899347068480.0354419228752043COADMale-baised eQTL
rs3745473chr19:49583369:T:C-0.03612899347068480.0354419228752043COADMale-baised eQTL
rs374707106chr19:42715822:C:T-0.04834122095492260.0370187544654708COADMale-baised eQTL
rs7245658chr19:42752740:A:G-0.04853302053391890.0398638188234589COADMale-baised eQTL
rs1673892chr19:52470970:A:C--0.06248591454512070.0404671597283825COADMale-baised eQTL
rs1808261chr19:43694224:C:G-0.05709758972097310.0406867327204307COADMale-baised eQTL
rs7248032chr19:42749822:A:G-0.04797167631593150.0418565496567043COADMale-baised eQTL
rs7259766chr19:42756549:C:T-0.04797167631593150.0418565496567043COADMale-baised eQTL
rs60227132chr19:42759448:G:A-0.04797167631593150.0418565496567043COADMale-baised eQTL
rs8101207chr19:53917937:T:C-0.03239531286696680.0422109129550994COADMale-baised eQTL
rs146228036chr19:42758864:C:G-0.04814989351792510.0428352649769985COADMale-baised eQTL
rs28452845chr19:42762470:A:C-0.04760364473669560.0430709310618413COADMale-baised eQTL
rs12462756chr19:49595166:G:A-0.03681552197365180.0435622358614795COADMale-baised eQTL
rs7250007chr19:42759548:G:C-0.04771336691600870.0439620124085318COADMale-baised eQTL
rs10409677chr19:42726151:G:A-0.0472546290880570.0451112165645917COADMale-baised eQTL
rs8103264chr19:42736227:C:G-0.04745801391427560.0455929351210604COADMale-baised eQTL
rs10415694chr19:42736823:T:G-0.04745801391427560.0455929351210604COADMale-baised eQTL
rs740588chr19:43692737:G:T-0.05356214372990390.0456436354719765COADMale-baised eQTL
rs10407540chr19:42779968:T:C-0.04992169404733170.0460447430209985COADMale-baised eQTL
rs28633233chr19:43697768:T:C-0.05670015386524740.0462910691292872COADMale-baised eQTL
rs7256532chr19:42734536:G:A-0.04735126005732030.0463165721726712COADMale-baised eQTL
rs7256198chr19:42734549:A:G-0.04735126005732030.0463165721726712COADMale-baised eQTL
rs10414012chr19:42750998:G:A-0.04742716111695930.0484835077940767COADMale-baised eQTL
rs10413483chr19:42751016:A:C-0.04742716111695930.0484835077940767COADMale-baised eQTL
rs4627484chr19:42755986:T:C-0.04742716111695930.0484835077940767COADMale-baised eQTL
rs75257969chr19:42764083:A:C-0.04742716111695930.0484835077940767COADMale-baised eQTL
rs8112534chr19:55841717:T:G-0.06578779453784170.0485221848221636COADMale-baised eQTL
rs28592745chr19:42742848:T:C-0.05515454089480610.0489958619249591COADMale-baised eQTL
rs28535711chr19:42742850:T:C-0.05515454089480610.0489958619249591COADMale-baised eQTL
rs10414462chr19:53012929:C:T-0.03776689601456130.0495396009404116COADMale-baised eQTL
rs28373856chr19:42743058:T:C-0.0472619504053150.0497492908799432COADMale-baised eQTL
rs11883370chr19:42743744:C:A-0.0472619504053150.0497492908799432COADMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

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Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

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Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

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Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

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Related disease information of CYTH2

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource