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Center for Computational Systems Medicine
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Gene summary

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Gene structure and Gene expression level

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Sex-biased somatic mutation

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DNA methylation with beta values in gene

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Exon skipping events with PSI in TCGA

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RNA A-to-I editing events in TCGA

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Sex-biased TF-Gene network of gene

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Sex-biased RBP-ES network of gene

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Sex-biased CeRNA regulation of gene

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Sex-biased eQTL regulation of gene

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Sex-biased eQTM regulation of gene

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Sex-biased sQTL regulation of gene

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Sex-biased sQTM regulation of gene

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Related disease information of gene

Gene: ENSG00000102901

Summary for CENPT

check button Gene summary

Gene informationEnsembl ID

ENSG00000102901

Gene symbol

CENPT

Gene namecentromere protein T
HGNC

25787

Entrez ID

80152

Gene typeprotein_coding
SynonymsCENPT|FLJ13111|CENP-T
UniProtAcc

Q96BT3


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

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Structure and expression level for CENPT

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

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Sex-biased somatic mutation for CENPT

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

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DNA methylation with beta values for CENPT

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
CHOLcg16485385chr16:67847954CGI:chr16:67846775-67847613promoter1.58e-013.54e-01-3.17e+001.52e-031.07e-02-1.95e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

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Exon skipping events with PSI in TCGA for CENPT

∗Please access ExonSkipDB for exon skipping annotation.
check buttonLandscape of exon skipping events across multiple cancer types.
AS event heatmap

check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

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RNA A-to-I editing events in TCGA for CENPT

∗Please access CAeditome for RNA editing annotation.
check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

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Sex-biased TF-Gene network for CENPT

check buttonTFs related to CENPT.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
TF Gene
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
READPLAGL2CENPT4.38e+009.88e-013.12e+001.80e-03Male-biased
READZNF101CENPT4.19e+009.82e-013.19e+004.77e-03Male-biased

check buttonCENPT related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

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Sex-biased RBP-ES network for CENPT

check buttonRBPs related to ES in CENPT.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
RBP ES
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
STADQKIexon_skip_1454791.43e+011.23e-021.46e+019.88e-01Female-biased
COADSAMD4Aexon_skip_1454776.47e+009.82e-015.50e+006.88e-05Male-biased
LUADSAMD4Aexon_skip_1454308.58e+009.92e-018.11e+002.23e-03Male-biased
CHOLRBM24exon_skip_1454608.21e+001.09e-028.60e+009.83e-01Female-biased
THCASAMD4Aexon_skip_1454308.54e+009.89e-018.19e+004.51e-03Male-biased
PAADSAMD4Aexon_skip_1454308.21e+008.87e-038.52e+009.85e-01Female-biased
PAADSNRPAexon_skip_1454607.08e+009.83e-016.71e+003.59e-03Male-biased
KIRCSAMD4Aexon_skip_1454308.21e+009.83e-017.90e+009.59e-03Male-biased
KIRCSAMD4Aexon_skip_1454775.55e+001.57e-046.30e+009.80e-01Female-biased
KICHQKIexon_skip_1454791.46e+011.74e-021.48e+019.82e-01Female-biased
SKCMSAMD4Aexon_skip_1454308.10e+006.30e-038.51e+009.87e-01Female-biased
HNSCSAMD4Aexon_skip_1454308.20e+003.14e-038.64e+009.91e-01Female-biased
SARCQKIexon_skip_1454791.48e+011.22e-021.52e+019.88e-01Female-biased

check buttonCENPT related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

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Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

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Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs12931546chr16:64922015:T:C-0.1245269267363760.00804097766993139BLCAFemale-baised eQTL
rs1864147chr16:64910710:C:G-0.1179487437802980.0158848052631227BLCAFemale-baised eQTL
rs12927264chr16:64908959:C:G-0.1112333184321320.0392033040115782BLCAFemale-baised eQTL
rs4967877chr16:64920449:T:C-0.1112333184321320.0392033040115782BLCAFemale-baised eQTL
rs16968039chr16:64906940:A:T-0.1105763529244040.0444225887528877BLCAFemale-baised eQTL
rs11646481chr16:64903346:G:T-0.1106115814183760.0455061482168367BLCAFemale-baised eQTL
rs62047471chr16:60642122:G:C-0.1451397316817950.0479868932912042BLCAFemale-baised eQTL
rs28523922chr16:61146047:A:G-0.06454480395739256.71781651846102e-05LUADFemale-baised eQTL
rs28608790chr16:61144933:A:G-0.06406424892188889.2012763389381e-05LUADFemale-baised eQTL
rs55908022chr16:61146064:T:G-0.06406424892188889.2012763389381e-05LUADFemale-baised eQTL
rs67653264chr16:61146314:T:C-0.06406424892188889.2012763389381e-05LUADFemale-baised eQTL
rs9936179chr16:61148189:G:A-0.06406424892188889.2012763389381e-05LUADFemale-baised eQTL
rs9929283chr16:61148438:T:C-0.06406424892188889.2012763389381e-05LUADFemale-baised eQTL
rs9931500chr16:61143274:C:G-0.06428190791372559.4402409870454e-05LUADFemale-baised eQTL
rs7186791chr16:61142711:T:C-0.06282833843550450.000275751320560991LUADFemale-baised eQTL
rs9935691chr16:61140578:A:G-0.06361634974259870.000336031945384483LUADFemale-baised eQTL
rs7199077chr16:61142486:C:G-0.0622945960004570.000376783635873874LUADFemale-baised eQTL
rs13333259chr16:58789172:T:C-0.04936231057319830.00185888695001562LUADFemale-baised eQTL
rs7203978chr16:58987492:A:G-0.06065684437393260.00240069961153022LUADFemale-baised eQTL
rs4581687chr16:58782137:C:T-0.04596657782688020.00288489910643132LUADFemale-baised eQTL
rs1014459chr16:59951161:C:T--0.0413280929647230.00923172475571814LUADFemale-baised eQTL
rs34968003chr16:61146673:G:T-0.05236816099840120.0132408700608055LUADFemale-baised eQTL
rs35424571chr16:57919106:C:G-0.07476210733726030.0147692411276972LUADFemale-baised eQTL
rs7193726chr16:57919811:G:T-0.07476210733726030.0147692411276972LUADFemale-baised eQTL
rs7198942chr16:59957400:C:T--0.0389539317280120.0177597837795658LUADFemale-baised eQTL
rs11640551chr16:58787994:A:G-0.0455664076098890.0215344687610916LUADFemale-baised eQTL
rs67155835chr16:61145390:A:G-0.04997644586272570.0247213550455446LUADFemale-baised eQTL
rs35427802chr16:61146641:A:G-0.04997644586272570.0247213550455446LUADFemale-baised eQTL
rs4785078chr16:59956041:A:G--0.0383385247318790.0297111882105333LUADFemale-baised eQTL
rs12927303chr16:59956544:A:G--0.0383385247318790.0297111882105333LUADFemale-baised eQTL
rs78715198chr16:58779850:G:A-0.05827402106844670.0307989786364243LUADFemale-baised eQTL
rs75663656chr16:58779858:T:C-0.05827402106844670.0307989786364243LUADFemale-baised eQTL
rs2407755chr16:61114746:G:A-0.04712278085980520.0311115959538867LUADFemale-baised eQTL
rs35512562chr16:58805641:C:T-0.04572332136661250.0322239585195143LUADFemale-baised eQTL
rs116866359chr16:58784257:C:T-0.05803298595175720.03225102596628LUADFemale-baised eQTL
rs34000898chr16:58793205:G:A-0.05700808770391050.0323205991065378LUADFemale-baised eQTL
rs112400392chr16:58763147:C:T-0.05795939994778390.0325079967024002LUADFemale-baised eQTL
rs12924255chr16:58764408:T:C-0.05795939994778390.0325079967024002LUADFemale-baised eQTL
rs12924887chr16:58764813:T:C-0.05795939994778390.0325079967024002LUADFemale-baised eQTL
rs11863183chr16:58769961:G:A-0.05795939994778390.0325079967024002LUADFemale-baised eQTL
rs73555772chr16:58811408:A:G-0.06002230276772870.0393817770178136LUADFemale-baised eQTL
rs8062792chr16:58800315:G:A-0.05421275000465460.0425465439866057LUADFemale-baised eQTL
rs2007281chr16:58805099:C:G-0.05421275000465460.0425465439866057LUADFemale-baised eQTL
rs12926241chr16:58805468:T:G-0.05421275000465460.0425465439866057LUADFemale-baised eQTL
rs12932254chr16:58807642:C:T-0.05421275000465460.0425465439866057LUADFemale-baised eQTL
rs67219538chr16:58811036:C:T-0.05421275000465460.0425465439866057LUADFemale-baised eQTL
rs61052185chr16:63453678:G:T-0.1385053367707480.00745562271137856COADFemale-baised eQTL
rs16966464chr16:63718434:C:T-0.1311827189849460.0448303088316068COADFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs4788665chr16:72846827:T:C-0.04892451537479870.0345806259082524STADMale-baised eQTL
rs231096chr16:64748492:G:C-0.0681051381952320.0038558101076212COADMale-baised eQTL
rs73558555chr16:59760258:G:A-0.1213238084647980.00520961944379366COADMale-baised eQTL
rs231075chr16:64739340:C:T-0.06773890890976760.00523348257502197COADMale-baised eQTL
rs73558553chr16:59759856:G:A-0.1142869205187240.00996519163276617COADMale-baised eQTL
rs231088chr16:64743375:C:G-0.06344463275141960.0103041203957497COADMale-baised eQTL
rs73558542chr16:59758100:G:A-0.1035095122014060.0146421959959154COADMale-baised eQTL
rs147935627chr16:59761617:G:A-0.1035095122014060.0146421959959154COADMale-baised eQTL
rs73563526chr16:59766618:G:A-0.1035095122014060.0146421959959154COADMale-baised eQTL
rs73563541chr16:59775758:C:T-0.1035095122014060.0146421959959154COADMale-baised eQTL
rs35495670chr16:74576524:T:C--0.06543694408351470.0148521560561543COADMale-baised eQTL
rs58919115chr16:59785816:G:A-0.1030704862822070.0153408365188256COADMale-baised eQTL
rs8061851chr16:59760951:G:T-0.103737970612330.0162825139474698COADMale-baised eQTL
rs2933553chr16:62626408:T:C--0.05457483874071650.0164021020125795COADMale-baised eQTL
rs74020043chr16:59746310:G:A-0.1091307108113770.0173981516324392COADMale-baised eQTL
rs74020044chr16:59746723:T:C-0.1091307108113770.0173981516324392COADMale-baised eQTL
rs74020045chr16:59747604:A:G-0.1091307108113770.0173981516324392COADMale-baised eQTL
rs231087chr16:64743326:T:A-0.0607519897973360.0177954445329956COADMale-baised eQTL
rs59379559chr16:59759206:T:G-0.09485215007457520.0182794942356681COADMale-baised eQTL
rs73563542chr16:59776152:T:C-0.09485215007457520.0182794942356681COADMale-baised eQTL
rs4967863chr16:64688412:T:C--0.05277379084528530.0183721118957926COADMale-baised eQTL
rs231079chr16:64740175:T:C-0.06035178947834750.0195332610533704COADMale-baised eQTL
rs231080chr16:64740550:G:A-0.06035178947834750.0195332610533704COADMale-baised eQTL
rs231081chr16:64740847:T:C-0.06035178947834750.0195332610533704COADMale-baised eQTL
rs12923487chr16:74610214:G:T--0.06505711118924550.0196044383155662COADMale-baised eQTL
rs231083chr16:64741180:G:A-0.06010352030758220.0200203475644879COADMale-baised eQTL
rs231082chr16:64741166:G:A-0.06000218033999260.020191748134209COADMale-baised eQTL
rs231085chr16:64742647:T:A-0.06000218033999260.020191748134209COADMale-baised eQTL
rs231086chr16:64743220:A:C-0.06000218033999260.020191748134209COADMale-baised eQTL
rs231090chr16:64744416:G:A-0.06000218033999260.020191748134209COADMale-baised eQTL
rs231098chr16:64750193:G:A-0.06086293619819990.0202589652988744COADMale-baised eQTL
rs231101chr16:64750602:A:C-0.06086293619819990.0202589652988744COADMale-baised eQTL
rs231103chr16:64750859:T:G-0.06086293619819990.0202589652988744COADMale-baised eQTL
rs231105chr16:64752316:A:G-0.06086293619819990.0202589652988744COADMale-baised eQTL
rs121676chr16:64745804:G:C-0.06000189274667180.0203887419287659COADMale-baised eQTL
rs231092chr16:64746454:T:C-0.06000189274667180.0203887419287659COADMale-baised eQTL
rs231093chr16:64747604:G:A-0.06000189274667180.0203887419287659COADMale-baised eQTL
rs231094chr16:64747671:A:C-0.06000189274667180.0203887419287659COADMale-baised eQTL
rs231095chr16:64748146:A:G-0.06000189274667180.0203887419287659COADMale-baised eQTL
rs189130chr16:64749078:G:A-0.06000189274667180.0203887419287659COADMale-baised eQTL
rs231116chr16:64766637:T:C-0.05943811064936980.0225817264481535COADMale-baised eQTL
rs60942290chr16:59749186:G:A-0.09950420309633950.022763217639592COADMale-baised eQTL
rs9928828chr16:75042975:G:A-0.0958620634728140.0227648502374909COADMale-baised eQTL
rs12927445chr16:71406816:A:G--0.05349726842910920.0299202659974224COADMale-baised eQTL
rs112685216chr16:74575619:G:A--0.0580524448031740.0424787647960682COADMale-baised eQTL
rs12919002chr16:74578479:A:G--0.0580524448031740.0424787647960682COADMale-baised eQTL
rs73559061chr16:59801776:C:T-0.09954916529828670.0481188362337279COADMale-baised eQTL
rs11862508chr16:74564790:T:C--0.05738342111418930.048447614043495COADMale-baised eQTL
rs13332334chr16:70727741:C:T-0.07779921692594570.0495156188991809COADMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

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Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

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Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

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Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

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Related disease information of CENPT

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource