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Center for Computational Systems Medicine
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Gene summary

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Gene structure and Gene expression level

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Sex-biased somatic mutation

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DNA methylation with beta values in gene

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Exon skipping events with PSI in TCGA

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RNA A-to-I editing events in TCGA

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Sex-biased TF-Gene network of gene

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Sex-biased RBP-ES network of gene

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Sex-biased CeRNA regulation of gene

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Sex-biased eQTL regulation of gene

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Sex-biased eQTM regulation of gene

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Sex-biased sQTL regulation of gene

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Sex-biased sQTM regulation of gene

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Related disease information of gene

Gene: ENSG00000068985

Summary for PAGE1

check button Gene summary

Gene informationEnsembl ID

ENSG00000068985

Gene symbol

PAGE1

Gene namePAGE family member 1
HGNC

4107

Entrez ID

8712

Gene typeprotein_coding
SynonymsPAGE1|PAGE-1|GAGE-9|CT16.3
UniProtAcc

O75459


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

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Structure and expression level for PAGE1

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
PAGE11.96e+01-1.70e+003.41e-01-4.98e+006.27e-071.06e-04STAD
PAGE14.57e+011.38e+005.28e-012.62e+008.83e-033.62e-02LIHC

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
PAGE14.94e+003.43e+008.51e-014.03e+005.48e-059.49e-05LUSC

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
PAGE13.17e+014.75e+001.20e+003.94e+008.03e-057.55e-04STAD

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Sex-biased somatic mutation for PAGE1

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

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DNA methylation with beta values for PAGE1

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
LGGcg03369828chrX:49695805CGI:chrX:49598934-49599547promoter,gene body7.34e-019.19e-01-1.52e+015.28e-525.85e-51-1.86e-01
THCAcg03369828chrX:49695805CGI:chrX:49598934-49599547promoter,gene body7.90e-019.06e-01-1.28e+011.78e-371.43e-36-1.16e-01
LIHCcg10796634chrX:49696002CGI:chrX:49598934-49599547promoter3.83e-012.81e-01-3.85e+001.20e-048.09e-041.02e-01
GBMcg03369828chrX:49695805CGI:chrX:49598934-49599547promoter,gene body6.60e-018.13e-01-2.69e+007.05e-031.96e-02-1.52e-01
CHOLcg10796634chrX:49696002CGI:chrX:49598934-49599547promoter7.43e-018.61e-01-2.90e+003.77e-031.04e-02-1.18e-01

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
LUADcg07882687chrX:49696005CGI:chrX:49598934-49599547promoter8.32e-019.51e-01-4.09e+004.27e-051.38e-04-1.19e-01
LUSCcg03369828chrX:49695805CGI:chrX:49598934-49599547promoter,gene body6.62e-019.51e-01-4.14e+003.54e-055.30e-04-2.89e-01
LUSCcg07882687chrX:49696005CGI:chrX:49598934-49599547promoter7.58e-019.49e-01-3.80e+001.44e-048.22e-04-1.91e-01
ESCAcg07882687chrX:49696005CGI:chrX:49598934-49599547promoter7.75e-019.35e-01-2.46e+001.38e-023.76e-02-1.60e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
BRCAcg10796634chrX:49696002CGI:chrX:49598934-49599547promoter6.63e-019.39e-01-1.08e+012.66e-272.84e-26-2.76e-01
BRCAcg03369828chrX:49695805CGI:chrX:49598934-49599547promoter,gene body5.73e-018.65e-01-1.24e+012.45e-357.63e-34-2.92e-01
BRCAcg07882687chrX:49696005CGI:chrX:49598934-49599547promoter7.31e-019.20e-01-1.08e+015.08e-275.27e-26-1.89e-01
KIRCcg03369828chrX:49695805CGI:chrX:49598934-49599547promoter,gene body7.92e-019.40e-01-3.25e+001.17e-034.87e-03-1.47e-01
LUADcg10796634chrX:49696002CGI:chrX:49598934-49599547promoter8.26e-019.53e-01-2.68e+007.42e-031.27e-02-1.26e-01
THCAcg03369828chrX:49695805CGI:chrX:49598934-49599547promoter,gene body7.90e-019.20e-01-7.40e+001.35e-138.74e-12-1.30e-01
HNSCcg10796634chrX:49696002CGI:chrX:49598934-49599547promoter7.62e-019.52e-01-2.94e+003.27e-031.13e-02-1.90e-01
COADcg10796634chrX:49696002CGI:chrX:49598934-49599547promoter8.04e-019.52e-01-2.27e+002.30e-022.88e-02-1.48e-01
BLCAcg10796634chrX:49696002CGI:chrX:49598934-49599547promoter5.12e-019.39e-01-3.44e+005.71e-043.81e-03-4.26e-01
LIHCcg10796634chrX:49696002CGI:chrX:49598934-49599547promoter3.83e-018.68e-01-3.07e+002.11e-034.06e-03-4.84e-01
KIRPcg10796634chrX:49696002CGI:chrX:49598934-49599547promoter8.63e-019.64e-01-3.37e+007.47e-043.27e-03-1.01e-01

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Exon skipping events with PSI in TCGA for PAGE1

∗Please access ExonSkipDB for exon skipping annotation.
check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

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RNA A-to-I editing events in TCGA for PAGE1

∗Please access CAeditome for RNA editing annotation.
check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

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Sex-biased TF-Gene network for PAGE1

check buttonTFs related to PAGE1.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
TF Gene
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
BRCAPOU3F3PAGE13.28e+004.89e-034.72e+009.88e-01Female-biased
BRCAZNF423PAGE14.57e+009.85e-013.26e+007.81e-03Male-biased
BRCAZNF879PAGE12.61e+006.58e-044.68e+009.92e-01Female-biased
SARCPATZ1PAGE14.12e+009.83e-013.37e+003.27e-03Male-biased

check buttonPAGE1 related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

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Sex-biased RBP-ES network for PAGE1

check buttonRBPs related to ES in PAGE1.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType

check buttonPAGE1 related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

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Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

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Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

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Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription
eQTM boxplot analysisGene ID: ENSG00000068985
CpG Site: cg03369828
Position to Gene: gene,promoter
Male Effect: -0.124860667193947
Female Effect: -

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type
cg03369828chrX:49695805gene,promoter-0.1248606671939471.26777461166986e-06-0.38790627892340772.0152233119889075e-09LUAD

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

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Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

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Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

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Related disease information of PAGE1

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource