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Center for Computational Systems Medicine
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Gene summary

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Gene structure and Gene expression level

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Sex-biased somatic mutation

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DNA methylation with beta values in gene

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Exon skipping events with PSI in TCGA

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RNA A-to-I editing events in TCGA

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Sex-biased TF-Gene network of gene

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Sex-biased RBP-ES network of gene

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Sex-biased CeRNA regulation of gene

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Sex-biased eQTL regulation of gene

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Sex-biased eQTM regulation of gene

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Sex-biased sQTL regulation of gene

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Sex-biased sQTM regulation of gene

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Related disease information of gene

Gene: ENSG00000064999

Summary for ANKS1A

check button Gene summary

Gene informationEnsembl ID

ENSG00000064999

Gene symbol

ANKS1A

Gene nameankyrin repeat and sterile alpha motif domain containing 1A
HGNC

20961

Entrez ID

23294

Gene typeprotein_coding
SynonymsANKS1A|KIAA0229
UniProtAcc

Q92625


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

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Structure and expression level for ANKS1A

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

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Sex-biased somatic mutation for ANKS1A

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

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DNA methylation with beta values for ANKS1A

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
CHOLcg04526365chr6:34890443CGI:chr6:34889049-34889887promoter,gene body1.71e-013.03e-01-2.29e+002.23e-023.24e-02-1.32e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta

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Exon skipping events with PSI in TCGA for ANKS1A

∗Please access ExonSkipDB for exon skipping annotation.
check buttonLandscape of exon skipping events across multiple cancer types.
AS event heatmap

check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

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RNA A-to-I editing events in TCGA for ANKS1A

∗Please access CAeditome for RNA editing annotation.
check buttonLandscape of RNA editing events across multiple cancer types.
ED heatmap

check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre
STADANKS1A-001chr6_34976093_+3.97e-012.90e-012.77e+005.68e-034.96e-021.07e-01

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

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Sex-biased TF-Gene network for ANKS1A

check buttonTFs related to ANKS1A.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
TF Gene
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
LAMLNHLH1ANKS1A3.45e+008.14e-034.40e+009.82e-01Female-biased
LAMLNR1H4ANKS1A3.35e+005.71e-034.39e+009.84e-01Female-biased
LAMLPATZ1ANKS1A3.26e+006.46e-034.27e+009.81e-01Female-biased
LAMLPLAGL2ANKS1A3.57e+003.03e-034.78e+009.91e-01Female-biased
LAMLTFAP2AANKS1A3.36e+005.12e-034.43e+009.85e-01Female-biased
LAMLTFAP2BANKS1A3.50e+007.46e-034.47e+009.84e-01Female-biased
LAMLTFAP2CANKS1A3.34e+006.45e-034.34e+009.83e-01Female-biased
LAMLZNF141ANKS1A3.38e+006.31e-034.39e+009.84e-01Female-biased
LAMLZNF300ANKS1A3.40e+008.05e-034.35e+009.81e-01Female-biased
LAMLZNF320ANKS1A3.37e+006.72e-034.37e+009.83e-01Female-biased
LAMLZNF331ANKS1A3.50e+007.15e-034.48e+009.84e-01Female-biased
LAMLZNF682ANKS1A3.26e+006.63e-034.26e+009.81e-01Female-biased
LAMLZNF692ANKS1A3.54e+007.01e-034.53e+009.85e-01Female-biased

check buttonANKS1A related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

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Sex-biased RBP-ES network for ANKS1A

check buttonRBPs related to ES in ANKS1A.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
RBP ES
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
UVMPABPC5exon_skip_4507607.28e+001.98e-037.72e+009.88e-01Female-biased
READSRSF2exon_skip_4507678.79e+001.06e-029.13e+009.86e-01Female-biased
GBMSRSF2exon_skip_4507678.80e+001.24e-029.12e+009.84e-01Female-biased
KICHKHDRBS1exon_skip_4507598.79e+009.92e-018.33e+002.60e-03Male-biased

check buttonANKS1A related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

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Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

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Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs61200608chr6:39821815:A:C-0.7375170600245410.0114221555743599GBMFemale-baised eQTL
rs9468134chr6:27464759:G:A-0.1925009413660430.0381804276697036GBMFemale-baised eQTL
rs28749550chr6:31192134:A:G-0.1543862618224780.0415109461393089SARCFemale-baised eQTL
rs55645855chr6:36931047:G:T-0.1765166530868890.00570056326158834KIRPFemale-baised eQTL
rs2145047chr6:36695875:G:A--0.1711825538756150.0291292544354496KIRPFemale-baised eQTL
rs72846019chr6:36826083:C:A-0.1407258950977280.0323235274264525KIRPFemale-baised eQTL
rs76207768chr6:36862584:G:A-0.1506222305566890.0442275046065448KIRPFemale-baised eQTL
rs79809702chr6:36873334:A:G-0.1506222305566890.0442275046065448KIRPFemale-baised eQTL
rs9267956chr6:32245861:A:G-0.0662228293962840.0495506218401991LUSCFemale-baised eQTL
rs1559876chr6:32247992:G:C-0.066146969240530.0499886764362939LUSCFemale-baised eQTL
rs9471930chr6:42849922:A:G-0.08351635195476940.000872507431468037KIRCFemale-baised eQTL
rs9471929chr6:42847937:C:T-0.08350265145117210.000883917430025856KIRCFemale-baised eQTL
rs17875364chr6:30488373:A:G-0.08634837154792420.00227419831666751KIRCFemale-baised eQTL
rs2495247chr6:41535256:A:G--0.07200254927373350.00367692322727042KIRCFemale-baised eQTL
rs2477821chr6:41535271:C:A--0.07200254927373350.00367692322727042KIRCFemale-baised eQTL
rs73737024chr6:44600846:G:A-0.08232115337421780.00615735950818936KIRCFemale-baised eQTL
rs73734706chr6:44621502:A:C-0.08077373249962540.00627068771485539KIRCFemale-baised eQTL
rs6908311chr6:43691888:C:T-0.08015582137211620.00827097701688239KIRCFemale-baised eQTL
rs61083251chr6:40945428:G:C-0.07949417055796210.00841977237029027KIRCFemale-baised eQTL
rs73737029chr6:44608839:C:A-0.07757077566083580.00981062416361293KIRCFemale-baised eQTL
rs55680632chr6:44619474:C:T-0.07743784857019670.00991058057195467KIRCFemale-baised eQTL
rs73737026chr6:44602072:A:G-0.07755168605317270.00998990681495201KIRCFemale-baised eQTL
rs113493169chr6:42976138:T:C-0.06451295584339590.0107983180204998KIRCFemale-baised eQTL
rs7745958chr6:40941945:A:G-0.07656597571139450.0121738325702425KIRCFemale-baised eQTL
rs946352chr6:44610801:A:T--0.07507538329965240.013038259175262KIRCFemale-baised eQTL
rs1283945chr6:44604569:T:C--0.07508669438471230.0131920565220643KIRCFemale-baised eQTL
rs2274518chr6:42975268:G:A-0.06314273972773070.013393060665487KIRCFemale-baised eQTL
rs542482chr6:44623086:T:C--0.07259798101552520.0150638193649276KIRCFemale-baised eQTL
rs605145chr6:44623638:C:T--0.07259798101552520.0150638193649276KIRCFemale-baised eQTL
rs602895chr6:44624154:T:C--0.07259798101552520.0150638193649276KIRCFemale-baised eQTL
rs6907920chr6:24952530:C:G-0.07201240146673020.0172187289869168KIRCFemale-baised eQTL
rs200526871chr6:24953335:C:T-0.07201240146673020.0172187289869168KIRCFemale-baised eQTL
rs12332965chr6:24956332:G:T-0.07201240146673020.0172187289869168KIRCFemale-baised eQTL
rs12332964chr6:24956432:C:G-0.07201240146673020.0172187289869168KIRCFemale-baised eQTL
rs7762091chr6:40937434:G:C-0.07371639859600930.0174715316911949KIRCFemale-baised eQTL
rs11961120chr6:40937080:T:C-0.07367316833770650.0180066517592378KIRCFemale-baised eQTL
rs2153162chr6:44611702:G:T--0.06795840741038770.0266776182365333KIRCFemale-baised eQTL
rs835938chr6:44619619:A:G--0.06800187778530720.0267396204308199KIRCFemale-baised eQTL
rs10428718chr6:43044028:T:C-0.05852179565717770.0281517494061206KIRCFemale-baised eQTL
rs74403439chr6:44566086:C:T-0.06731926129527120.0376100046608326KIRCFemale-baised eQTL
rs72847368chr6:27881104:T:C-0.0637208575554710.0406676345582397KIRCFemale-baised eQTL
rs11963686chr6:44565427:A:G-0.06682694246782550.0412151752375574KIRCFemale-baised eQTL
rs73423148chr6:40935734:G:A-0.06511843766051760.0482273752721999KIRCFemale-baised eQTL
rs6938916chr6:40939718:G:A-0.06508926977823410.0485041636544249KIRCFemale-baised eQTL
rs7746251chr6:40942057:C:G-0.06508926977823410.0485041636544249KIRCFemale-baised eQTL
rs707969chr6:35321669:T:C--0.08606569572751440.00979041069649242LUADFemale-baised eQTL
rs804828chr6:37640238:T:C--0.06167159981954420.0181865282669634LUADFemale-baised eQTL
rs6937882chr6:29327710:G:T-0.0548612968427030.0196002787799356LUADFemale-baised eQTL
rs12660111chr6:29328371:C:T-0.05416782543835060.0219681970502779LUADFemale-baised eQTL
rs34707346chr6:29359681:T:C-0.05339131135546570.0259965589251628LUADFemale-baised eQTL
rs6935047chr6:29309301:G:A-0.05310487499911270.0298428815258854LUADFemale-baised eQTL
rs6942138chr6:29310827:G:A-0.05310487499911270.0298428815258854LUADFemale-baised eQTL
rs34930832chr6:29319223:T:C-0.05241501266235210.0311858459702455LUADFemale-baised eQTL
rs35087453chr6:29316192:A:T-0.05175913659770680.0362751383537014LUADFemale-baised eQTL
rs35095140chr6:29312172:C:T-0.05148361415106360.038338340047132LUADFemale-baised eQTL
rs7742085chr6:32778401:T:G-0.1139447235953980.0154144151372538COADFemale-baised eQTL
rs35943237chr6:40798894:C:T--0.07475542681381550.0295874663833625COADFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs7739148chr6:35472007:A:C-0.1055020354223020.0446990780042183PAADMale-baised eQTL
rs9462778chr6:42186859:T:C-0.07131331079869570.000811038146908681KIRPMale-baised eQTL
rs113248689chr6:35476822:T:C-0.07966899021716150.000891210453901792KIRPMale-baised eQTL
rs45593535chr6:35464116:G:T-0.07832763760619070.000917739888301098KIRPMale-baised eQTL
rs56855829chr6:35464877:C:T-0.07832763760619070.000917739888301098KIRPMale-baised eQTL
rs45440096chr6:35465309:G:T-0.07832763760619070.000917739888301098KIRPMale-baised eQTL
rs41271257chr6:35468418:G:A-0.07832763760619070.000917739888301098KIRPMale-baised eQTL
rs6937124chr6:35470792:C:T-0.07832763760619070.000917739888301098KIRPMale-baised eQTL
rs7742865chr6:35455079:A:G-0.07555190065901790.00155285360314633KIRPMale-baised eQTL
rs75424364chr6:35447181:A:T-0.07552280336160690.00157717366089951KIRPMale-baised eQTL
rs112334764chr6:35447831:T:C-0.07552280336160690.00157717366089951KIRPMale-baised eQTL
rs78333619chr6:35448103:G:A-0.07552280336160690.00157717366089951KIRPMale-baised eQTL
rs9469042chr6:31715241:T:C-0.07737255686725480.00472338575516737KIRPMale-baised eQTL
rs9461716chr6:31717066:T:C-0.07687147656686910.00531892856929405KIRPMale-baised eQTL
rs9469040chr6:31712097:G:T-0.07570177477601770.00719212752476521KIRPMale-baised eQTL
rs9461717chr6:31717067:G:A-0.07356032247281880.00886660284314288KIRPMale-baised eQTL
rs3749952chr6:31715380:T:G-0.07354557147259170.0090401199835398KIRPMale-baised eQTL
rs4713479chr6:31721022:C:T-0.07346067459918440.00908119539860462KIRPMale-baised eQTL
rs60889636chr6:35365977:C:T-0.06354280011077220.018901314063544KIRPMale-baised eQTL
rs7770619chr6:35382265:C:T-0.06098603271590590.0291053852134608KIRPMale-baised eQTL
rs375915634chr6:35385503:C:A-0.06098603271590590.0291053852134608KIRPMale-baised eQTL
rs113038563chr6:41288969:A:G-0.05929408190261840.0489107736460335KIRPMale-baised eQTL
rs4714443chr6:41252646:G:A-0.04400579562271280.0358854158558309LGGMale-baised eQTL
rs9296137chr6:34871459:T:C-0.0574134524222960.0419388327089339LGGMale-baised eQTL
rs1484270chr6:41260910:A:G-0.04244312231895550.0423692310196677LGGMale-baised eQTL
rs9266183chr6:31356870:T:C-0.06474164224628870.0425951390246959LGGMale-baised eQTL
rs9259871chr6:29930197:A:G-0.05447372427677290.00016317836649532KIRCMale-baised eQTL
rs1059449chr6:29942921:G:A-0.06615468120362830.000453268555598235KIRCMale-baised eQTL
rs41541222chr6:29942926:G:T-0.06615468120362830.000453268555598235KIRCMale-baised eQTL
rs56682211chr6:39473376:C:T-0.04870523365683690.0110743261529062KIRCMale-baised eQTL
rs62402245chr6:39477657:T:C-0.04870523365683690.0110743261529062KIRCMale-baised eQTL
rs140562444chr6:39478061:A:G-0.04870523365683690.0110743261529062KIRCMale-baised eQTL
rs57924933chr6:39450093:G:A-0.04915621209660290.0116186744075737KIRCMale-baised eQTL
rs57310726chr6:39447876:C:A-0.0491812763290690.011627325514427KIRCMale-baised eQTL
rs57697326chr6:39448590:C:A-0.0491812763290690.011627325514427KIRCMale-baised eQTL
rs9259871chr6:29930197:A:C--0.03194660795976330.0177311414942014KIRCMale-baised eQTL
rs618393chr6:24954007:T:C--0.06403874530075450.0276100305435666KIRCMale-baised eQTL
rs12194214chr6:41060835:A:C-0.05290073934835760.0281901920987357KIRCMale-baised eQTL
rs12189634chr6:41100684:G:T-0.05788424796479880.0317347710320306KIRCMale-baised eQTL
rs631693chr6:24954655:T:C--0.06145538056511070.0371415291725893KIRCMale-baised eQTL
rs662608chr6:24956997:T:C--0.06085850044557350.0410706246597457KIRCMale-baised eQTL
rs1655922chr6:29939855:T:C--0.0336230238747510.0445008127247154KIRCMale-baised eQTL
rs384411chr6:24956875:C:T--0.05935651636557850.0457999721814294KIRCMale-baised eQTL
rs386554854chr6:32193653:C:A-0.0776499262710840.00662170817378125COADMale-baised eQTL
rs9257687chr6:29299398:A:G--0.05325173943376770.0266647779354231COADMale-baised eQTL
rs3176361chr6:36688190:C:T-0.07943469977965970.0296476149582084COADMale-baised eQTL
rs12528248chr6:36688605:G:A-0.07836267354667120.0336250618115814COADMale-baised eQTL
rs1033569chr6:29289995:C:T--0.05160488305141870.0341335523844023COADMale-baised eQTL
rs1033568chr6:29290190:G:A--0.05160488305141870.0341335523844023COADMale-baised eQTL
rs4713207chr6:29296878:A:G--0.05160488305141870.0341335523844023COADMale-baised eQTL
rs2394246chr6:29959391:G:T-0.0704073183413820.0403970438677409COADMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

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Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription
eQTM boxplot analysisGene ID: ENSG00000064999
CpG Site: cg06902099
Position to Gene: gene
Male Effect: -0.181919160641724
Female Effect: -
eQTM boxplot analysisGene ID: ENSG00000064999
CpG Site: cg02665650
Position to Gene: gene
Male Effect: -
Female Effect: -0.225076196704264

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type
cg06902099chr6:35034820gene-0.1819191606417244.28584873190527e-17-0.59123953578040832.4553555543105564e-20KIRP

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type
cg02665650chr6:35017061gene-0.2250761967042645.47445871872865e-05-0.3470565972354211.2674075413926494e-07LUAD

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

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Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

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Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

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Related disease information of ANKS1A

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource
ENSG00000064999ANKS1AC0010054Coronary Arteriosclerosis1CTD_human
ENSG00000064999ANKS1AC1956346Coronary Artery Disease1CTD_human