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Center for Computational Systems Medicine
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Gene summary

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Gene structure and Gene expression level

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Sex-biased somatic mutation

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DNA methylation with beta values in gene

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Exon skipping events with PSI in TCGA

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RNA A-to-I editing events in TCGA

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Sex-biased TF-Gene network of gene

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Sex-biased RBP-ES network of gene

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Sex-biased CeRNA regulation of gene

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Sex-biased eQTL regulation of gene

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Sex-biased eQTM regulation of gene

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Sex-biased sQTL regulation of gene

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Sex-biased sQTM regulation of gene

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Related disease information of gene

Gene: ENSG00000026025

Summary for VIM

check button Gene summary

Gene informationEnsembl ID

ENSG00000026025

Gene symbol

VIM

Gene namevimentin
HGNC

12692

Entrez ID

7431

Gene typeprotein_coding
SynonymsVIM|
UniProtAcc

P08670


check buttonDrugs associated with this gene(DrugBank).
Gene IDGene SymbolDrug IDDrug NameDrug Type
ENSG00000026025VIMDB11638ArtenimolSmallMoleculeDrug
ENSG00000026025VIMDB12695Phenethyl IsothiocyanateSmallMoleculeDrug

check buttonCancer therapeutic drugs associated with this gene(NCI).
Gene IDGene NameDrug IDDrug NameDrug TypeCancer

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Structure and expression level for VIM

check buttonAS events and RNA A-to-I editing events of the gene in TCGA based on Genvode V22 structure.
∗For more information on exon skipping events please check the ExonskipDB database.
∗For more information on exon skipping events please check the CAeditome database.
UCSC result

check buttonLandscape of gene expressions across multiple cancer types.
gene expression analysis

check buttonDifferentially expressed gene analysis between tumor male and tumor female samples.
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type

check buttonDifferentially expressed gene analysis between tumor male and normal male samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
VIM2.34e+04-1.07e+004.64e-01-2.31e+002.07e-024.44e-02BLCA
VIM4.19e+042.25e+006.35e-013.55e+003.92e-041.48e-03CHOL

check buttonDifferentially expressed gene analysis between tumor female and normal female samples.
DEG result
Coding NameBase Meanlog2FoldChangelfcSEStatP valueP.adjust ValueCancer Type
VIM1.73e+04-1.42e+002.89e-01-4.90e+009.61e-073.61e-06KICH
VIM6.18e+04-1.41e+008.79e-02-1.60e+016.80e-588.64e-57BRCA
VIM9.93e+03-1.02e+003.50e-01-2.92e+003.50e-031.02e-02READ

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Sex-biased somatic mutation for VIM

∗For more information on exon skipping events please check the ExonskipDB database.
Gene IDCancer TypeHugo SymbolMaleFemalepvalorci.upci.lowadjPval

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DNA methylation with beta values for VIM

check buttonLandscape of DNA methylation across multiple cancer types.
methylation heatmap

check buttonDifferentially expressed CpG sites between male tumor and female tumor patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
BRCAcg12874092chr10:17229520CGI:chr10:17228431-17230618promoter,exon,CDS,gene body1.83e-013.34e-01-1.98e+004.82e-024.92e-02-1.51e-01
BRCAcg19111999chr10:17228088CGI:chr10:17228431-17230618promoter3.64e-015.79e-01-2.65e+008.04e-032.46e-02-2.16e-01
BRCAcg20198108chr10:17228092CGI:chr10:17228431-17230618promoter2.58e-014.12e-01-2.23e+002.54e-023.83e-02-1.54e-01
BRCAcg05151811chr10:17228251CGI:chr10:17228431-17230618promoter2.61e-014.43e-01-2.38e+001.73e-023.31e-02-1.82e-01
BRCAcg08918274chr10:17228301CGI:chr10:17228431-17230618UTR,promoter,exon,gene body3.01e-014.97e-01-2.32e+002.02e-023.51e-02-1.96e-01
BRCAcg23912429chr10:17228432CGI:chr10:17228431-17230618UTR,promoter,exon,gene body3.52e-015.41e-01-2.11e+003.48e-024.35e-02-1.89e-01
BRCAcg11973177chr10:17229007CGI:chr10:17228431-17230618promoter,exon,gene body1.62e-012.68e-01-2.17e+003.00e-024.10e-02-1.05e-01
BRCAcg26983469chr10:17229052CGI:chr10:17228431-17230618promoter,gene body2.67e-014.26e-01-2.17e+002.98e-024.08e-02-1.59e-01
SARCcg10790685chr10:17227275CGI:chr10:17228431-17230618promoter4.39e-015.60e-01-2.91e+003.65e-039.17e-03-1.22e-01

check buttonDifferentially expressed CpG sites between male tumor and male normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
LUADcg10790685chr10:17227275CGI:chr10:17228431-17230618promoter4.00e-015.21e-01-3.24e+001.19e-032.25e-03-1.20e-01
LUADcg26983469chr10:17229052CGI:chr10:17228431-17230618promoter,gene body1.54e-014.91e-022.35e+001.90e-022.27e-021.05e-01
THCAcg10790685chr10:17227275CGI:chr10:17228431-17230618promoter6.04e-014.81e-012.42e+001.54e-022.24e-021.23e-01
HNSCcg27313572chr10:17229295CGI:chr10:17228431-17230618UTR,promoter,exon,gene body1.34e-011.76e-024.74e+002.12e-061.06e-051.17e-01
HNSCcg23991622chr10:17229304CGI:chr10:17228431-17230618UTR,promoter,exon,gene body1.39e-012.41e-023.63e+002.85e-046.26e-041.15e-01
LUSCcg02236650chr10:17227776CGI:chr10:17228431-17230618promoter3.14e-011.11e-013.18e+001.48e-033.38e-032.04e-01
COADcg01003015chr10:17229137CGI:chr10:17228431-17230618promoter,gene body1.97e-017.50e-023.52e+004.33e-041.14e-031.22e-01
COADcg08918274chr10:17228301CGI:chr10:17228431-17230618UTR,promoter,exon,gene body1.66e-015.21e-021.97e+004.93e-024.94e-021.14e-01
BLCAcg02746869chr10:17229930CGI:chr10:17228431-17230618promoter,exon,CDS,gene body3.67e-019.83e-022.79e+005.24e-038.45e-032.69e-01
BLCAcg18514820chr10:17229945CGI:chr10:17228431-17230618promoter,exon,CDS,gene body3.91e-017.29e-022.81e+004.94e-038.07e-033.18e-01
BLCAcg20319091chr10:17229995CGI:chr10:17228431-17230618promoter,gene body2.80e-013.54e-022.90e+003.73e-036.44e-032.45e-01
BLCAcg05151811chr10:17228251CGI:chr10:17228431-17230618promoter2.41e-017.77e-022.59e+009.47e-031.35e-021.64e-01
BLCAcg08918274chr10:17228301CGI:chr10:17228431-17230618UTR,promoter,exon,gene body3.22e-018.71e-022.57e+001.02e-021.44e-022.35e-01
BLCAcg00146951chr10:17228377CGI:chr10:17228431-17230618UTR,promoter,exon,gene body2.54e-018.63e-022.40e+001.62e-022.07e-021.68e-01
LIHCcg01154046chr10:17228602CGI:chr10:17228431-17230618promoter,exon,gene body2.04e-012.40e-024.17e+003.08e-057.31e-051.80e-01
LIHCcg23821329chr10:17227644CGI:chr10:17228431-17230618promoter2.14e-015.16e-01-5.46e+004.73e-082.83e-07-3.01e-01
LIHCcg19111999chr10:17228088CGI:chr10:17228431-17230618promoter3.42e-011.76e-013.16e+001.57e-032.37e-031.67e-01
LIHCcg20198108chr10:17228092CGI:chr10:17228431-17230618promoter2.66e-011.01e-014.05e+005.23e-051.17e-041.65e-01
LIHCcg06460869chr10:17228095CGI:chr10:17228431-17230618promoter3.02e-011.32e-014.59e+004.48e-061.36e-051.69e-01
LIHCcg05151811chr10:17228251CGI:chr10:17228431-17230618promoter2.28e-011.16e-012.61e+009.06e-031.12e-021.12e-01
LIHCcg00146951chr10:17228377CGI:chr10:17228431-17230618UTR,promoter,exon,gene body2.80e-011.65e-012.31e+002.11e-022.34e-021.14e-01
KIRPcg23821329chr10:17227644CGI:chr10:17228431-17230618promoter3.80e-015.94e-01-3.33e+008.69e-041.62e-03-2.14e-01
CHOLcg20018469chr10:17230118CGI:chr10:17228431-17230618UTR,promoter,exon,gene body3.24e-021.49e-01-3.54e+004.02e-048.32e-03-1.17e-01

check buttonDifferentially expressed CpG sites between female tumor and female normal patients.
Cancer TypeCpG SitePositionCpG IslandPosition to Geneave1ave2wilcoxon.wwilcoxon.ppadjdBeta
BRCAcg02746869chr10:17229930CGI:chr10:17228431-17230618promoter,exon,CDS,gene body1.88e-015.13e-025.21e+001.87e-073.72e-071.36e-01
BRCAcg18514820chr10:17229945CGI:chr10:17228431-17230618promoter,exon,CDS,gene body1.97e-013.43e-024.70e+002.57e-064.59e-061.63e-01
BRCAcg20319091chr10:17229995CGI:chr10:17228431-17230618promoter,gene body1.33e-012.19e-026.09e+001.10e-092.67e-091.11e-01
BRCAcg01154046chr10:17228602CGI:chr10:17228431-17230618promoter,exon,gene body1.16e-011.61e-026.80e+001.03e-112.93e-111.00e-01
BRCAcg27313572chr10:17229295CGI:chr10:17228431-17230618UTR,promoter,exon,gene body1.57e-012.05e-028.04e+009.36e-163.61e-151.36e-01
BRCAcg23991622chr10:17229304CGI:chr10:17228431-17230618UTR,promoter,exon,gene body1.46e-012.82e-027.33e+002.23e-137.21e-131.18e-01
BRCAcg12874092chr10:17229520CGI:chr10:17228431-17230618promoter,exon,CDS,gene body1.83e-011.47e-029.71e+002.64e-221.74e-211.68e-01
BRCAcg10790685chr10:17227275CGI:chr10:17228431-17230618promoter4.06e-015.95e-01-8.62e+006.76e-183.08e-17-1.89e-01
BRCAcg02236650chr10:17227776CGI:chr10:17228431-17230618promoter5.50e-012.32e-017.54e+004.55e-141.55e-133.18e-01
BRCAcg19111999chr10:17228088CGI:chr10:17228431-17230618promoter3.64e-011.54e-017.10e+001.26e-123.83e-122.10e-01
BRCAcg20198108chr10:17228092CGI:chr10:17228431-17230618promoter2.58e-011.12e-014.48e+007.50e-061.27e-051.46e-01
BRCAcg05151811chr10:17228251CGI:chr10:17228431-17230618promoter2.61e-016.71e-021.01e+018.27e-246.28e-231.94e-01
BRCAcg08918274chr10:17228301CGI:chr10:17228431-17230618UTR,promoter,exon,gene body3.01e-016.81e-028.83e+001.09e-185.28e-182.33e-01
BRCAcg00146951chr10:17228377CGI:chr10:17228431-17230618UTR,promoter,exon,gene body2.73e-017.42e-021.07e+016.95e-277.11e-261.98e-01
BRCAcg23912429chr10:17228432CGI:chr10:17228431-17230618UTR,promoter,exon,gene body3.52e-019.29e-029.40e+005.29e-213.12e-202.60e-01
BRCAcg11973177chr10:17229007CGI:chr10:17228431-17230618promoter,exon,gene body1.62e-015.92e-023.39e+006.89e-049.24e-041.03e-01
BRCAcg26983469chr10:17229052CGI:chr10:17228431-17230618promoter,gene body2.67e-016.00e-027.91e+002.63e-159.81e-152.07e-01
BLCAcg02236650chr10:17227776CGI:chr10:17228431-17230618promoter4.68e-012.04e-012.46e+001.38e-022.14e-022.64e-01

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Exon skipping events with PSI in TCGA for VIM

∗Please access ExonSkipDB for exon skipping annotation.
check buttonLandscape of exon skipping events across multiple cancer types.
AS event heatmap

check buttonDifferentially expressed exon skipping events between male tumor and female tumor patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between male tumor and male normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

check buttonDifferentially expressed exon skipping events between female tumor and female normal patients.
Cancer TypeExon Skippingave.female_Tave.female_Nwilcoxon.wwilcoxon.ppadjdPSI

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RNA A-to-I editing events in TCGA for VIM

∗Please access CAeditome for RNA editing annotation.
check buttonDifferentially expressed RNA editing events between male tumor and female tumor patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between male tumor and male normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonDifferentially expressed RNA editing events between female tumor and female normal patients.
Cancer TypeTranscriptEditingave.male_Tave.female_Twilcoxon.wwilcoxon.pp_adjdFre

check buttonProtein coding RNA editing(s).
Editing PositionVariant TypeGene SymbolTranscript IDNTchangeAAchange

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Sex-biased TF-Gene network for VIM

check buttonTFs related to VIM.
∗The female-biased TF-gene edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased TF-gene edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
Cancer TypeTFTarget GeneMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType

check buttonVIM related gene.
∗Only the gene encode TF might with this result.
∗For more information please check Sex-biased TF-Coding gene network.

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Sex-biased RBP-ES network for VIM

check buttonRBPs related to ES in VIM.
∗The female-biased RBP-ES edges were identified if Female_Edge_threshold>0.98 and Male_Edge_threshold<=0.98.
∗The male-biased RBP-ES edges were identified if Male_Edge_threshold>0.98 and Female_Edge_threshold<=0.98.
RBP ES
Cancer TypeRBPTarget ESMale Edge ScoreMale Edge ThresholdFemale Edge ScoreFemale Edge ThresholdType
UVMMSI1exon_skip_399331.52e+014.85e-041.58e+019.99e-01Female-biased
THYMMSI1exon_skip_399331.59e+019.99e-011.53e+014.76e-04Male-biased
LIHCMSI1exon_skip_399331.55e+019.97e-011.49e+012.62e-03Male-biased
LUSCNOVA2exon_skip_399287.27e+008.36e-037.65e+009.82e-01Female-biased
DLBCENOX1exon_skip_399159.44e+001.03e-029.78e+009.87e-01Female-biased
LUADMSI1exon_skip_399331.44e+016.67e-041.51e+019.99e-01Female-biased
CHOLENOX1exon_skip_399159.73e+009.88e-019.32e+009.69e-03Male-biased
BRCAENOX1exon_skip_399159.69e+009.83e-019.17e+001.49e-02Male-biased
BRCAMSI1exon_skip_399331.53e+019.85e-011.48e+011.53e-02Male-biased
ESCARBM6exon_skip_399429.41e+001.01e-029.85e+009.88e-01Female-biased
READMSI1exon_skip_399331.58e+011.00e+001.51e+013.97e-04Male-biased
LGGMSI1exon_skip_399331.45e+011.03e-031.51e+019.99e-01Female-biased
PAADMSI1exon_skip_399331.53e+011.00e+001.46e+011.10e-04Male-biased
BLCAMSI1exon_skip_399331.50e+015.02e-041.57e+019.99e-01Female-biased
HNSCFusip1exon_skip_399367.00e+007.76e-037.35e+009.81e-01Female-biased
SARCMSI1exon_skip_399331.50e+018.90e-041.57e+019.99e-01Female-biased

check buttonVIM related ES.
∗Only the gene encode RBP might with this result.
∗For more information please check Sex-biased RBP-ES network in cancer.

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Sex-biased CeRNA regulation of gene

check buttonSex-biased CeRNA regulation of gene.
Gene IDceRNA(lncRNA-miRNA-mRNA)GroupCancer Type

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Sex-biased eQTL regulation of gene

check buttonSex-biased eQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
eQTLDescription

check buttonMale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs12250946chr10:25134771:C:T-0.13019698390460.0230385971088763PCPGFemale-baised eQTL
rs12413226chr10:25138529:G:A-0.13019698390460.0230385971088763PCPGFemale-baised eQTL
rs12258602chr10:25134736:T:C-0.1294627483345970.026253687669831PCPGFemale-baised eQTL
rs11014409chr10:25135253:G:A-0.1294627483345970.026253687669831PCPGFemale-baised eQTL
rs12240931chr10:25152806:G:A-0.122100816349090.0462382697137249PCPGFemale-baised eQTL
rs12267845chr10:25154636:T:C-0.122100816349090.0462382697137249PCPGFemale-baised eQTL
rs7904193chr10:25157316:C:T-0.122100816349090.0462382697137249PCPGFemale-baised eQTL
rs12246406chr10:25142884:C:T-0.1218948523516090.0482183776663356PCPGFemale-baised eQTL
rs7893138chr10:13670701:G:T--0.1462299226744470.0479276139058235HNSCFemale-baised eQTL
rs11012179chr10:20594839:G:C-0.1186513442987160.0121688856396014LUSCFemale-baised eQTL
rs12359925chr10:20597713:G:C-0.1159869430493310.0161297825730483LUSCFemale-baised eQTL
rs72791262chr10:20532595:C:T-0.1233014765654070.0413073420203475LUSCFemale-baised eQTL
rs10741057chr10:18427174:C:A--0.08085759517660870.021524495506999LGGFemale-baised eQTL
rs10741058chr10:18427216:T:C--0.08105713147226080.0226593974670206LGGFemale-baised eQTL
rs997264chr10:18414966:C:A--0.07972259134261060.0327584462704591LGGFemale-baised eQTL
rs6482408chr10:18426611:A:G--0.07847839301162460.0342936882099244LGGFemale-baised eQTL
rs6482409chr10:18426660:C:T--0.07847839301162460.0342936882099244LGGFemale-baised eQTL
rs6482410chr10:18426681:A:G--0.07847839301162460.0342936882099244LGGFemale-baised eQTL
rs10764483chr10:18427417:A:G--0.07847839301162460.0342936882099244LGGFemale-baised eQTL
rs10828679chr10:18422359:G:A--0.07437870705719330.0444276306673742LGGFemale-baised eQTL
rs17267324chr10:14723577:G:C-0.1530856652730740.0189302484014625KIRCFemale-baised eQTL
rs56159005chr10:14714418:A:G-0.1555872932707290.0260184490028571KIRCFemale-baised eQTL
rs111283074chr10:14718522:C:T-0.1555872932707290.0260184490028571KIRCFemale-baised eQTL
rs2167708chr10:14719637:C:T-0.1555872932707290.0260184490028571KIRCFemale-baised eQTL
rs55954679chr10:14703140:A:G-0.1521345207193970.027396938845228KIRCFemale-baised eQTL
rs7918691chr10:9497083:G:A--0.07054092750134560.0406611551382592KIRCFemale-baised eQTL
rs113072550chr10:14725986:C:T-0.1473350407967150.0415772131625416KIRCFemale-baised eQTL
rs76882717chr10:14726308:C:T-0.1473350407967150.0415772131625416KIRCFemale-baised eQTL
rs4237407chr10:9513687:T:C-0.06997291048436660.042034951257499KIRCFemale-baised eQTL
rs112756695chr10:8232510:G:A-0.1827627499854650.00832624671164316BLCAFemale-baised eQTL
rs1926697chr10:22085560:G:A-0.1077707232134370.0151652649275199BLCAFemale-baised eQTL
rs60009316chr10:17429763:G:T-0.1426962826076810.0152139679944952BLCAFemale-baised eQTL
rs3011627chr10:22070969:A:G--0.1047512017049520.0218855410347655BLCAFemale-baised eQTL
rs3011636chr10:22075635:G:A-0.1047512017049520.0218855410347655BLCAFemale-baised eQTL
rs2986338chr10:22079429:G:C-0.1047512017049520.0218855410347655BLCAFemale-baised eQTL
rs2986333chr10:22089658:C:G-0.1047512017049520.0218855410347655BLCAFemale-baised eQTL
rs2986332chr10:22089701:G:A-0.1047512017049520.0218855410347655BLCAFemale-baised eQTL
rs2986331chr10:22089754:G:A-0.1047512017049520.0218855410347655BLCAFemale-baised eQTL
rs3011640chr10:22096295:C:A-0.1047512017049520.0218855410347655BLCAFemale-baised eQTL
rs7068065chr10:22046160:G:A--0.1046251889437560.022274633311901BLCAFemale-baised eQTL
rs61842123chr10:17391363:G:A-0.1350627117063250.0281211013507381BLCAFemale-baised eQTL
rs7090520chr10:22045703:C:T--0.1042649762792040.0284317146060443BLCAFemale-baised eQTL
rs45466899chr10:17398196:G:A-0.1350894611145370.0285010529114253BLCAFemale-baised eQTL
rs4437938chr10:22052492:G:A--0.1020600190435110.0293669170760357BLCAFemale-baised eQTL
rs11812907chr10:22053103:T:C--0.1020600190435110.0293669170760357BLCAFemale-baised eQTL
rs7897803chr10:22054340:G:T--0.1020600190435110.0293669170760357BLCAFemale-baised eQTL
rs10764335chr10:22054461:T:C--0.1020600190435110.0293669170760357BLCAFemale-baised eQTL
rs4592322chr10:22055238:A:G--0.1020600190435110.0293669170760357BLCAFemale-baised eQTL
rs10741000chr10:22055391:G:C--0.1020600190435110.0293669170760357BLCAFemale-baised eQTL
rs6482201chr10:22064023:T:C--0.1020600190435110.0293669170760357BLCAFemale-baised eQTL
rs11012883chr10:18179195:C:T-0.2277154421180550.0297204572639207BLCAFemale-baised eQTL
rs78940953chr10:18204666:G:C-0.1970936222452870.0304012473690825BLCAFemale-baised eQTL
rs6482198chr10:22047222:G:A--0.1014623441419620.0331396344348853BLCAFemale-baised eQTL
rs881774chr10:17438593:A:G-0.1435076119661360.0357538554604545BLCAFemale-baised eQTL
rs10508542chr10:17445329:A:G-0.1357911685261170.0367946551838272BLCAFemale-baised eQTL
rs7895707chr10:22049029:T:G--0.1000902692159070.0376498710602447BLCAFemale-baised eQTL
rs61564840chr10:17445664:G:C-0.1207491194151980.0389789244659179BLCAFemale-baised eQTL
rs1931881chr10:19316654:A:T-0.08157586900269430.0399753785591101BLCAFemale-baised eQTL
rs6482200chr10:22063020:A:G--0.1000633387639410.0412717431394826BLCAFemale-baised eQTL
rs59320988chr10:17445901:G:A-0.1337959915900290.0425320640955351BLCAFemale-baised eQTL
rs746571chr10:17409325:G:A-0.128510193071420.0442326021216239BLCAFemale-baised eQTL
rs913519chr10:17410488:A:C-0.128510193071420.0442326021216239BLCAFemale-baised eQTL
rs1810796chr10:17411393:G:A-0.128510193071420.0442326021216239BLCAFemale-baised eQTL
rs7095166chr10:7779118:A:G--0.09222885939262180.0454127525893326BLCAFemale-baised eQTL
rs66745587chr10:17503893:C:T-0.1303057927700260.0454630399510144BLCAFemale-baised eQTL
rs45466893chr10:17422443:T:C-0.1283572003147940.0455735288770397BLCAFemale-baised eQTL
rs11257524chr10:12081081:A:G-0.1291149355710540.0457287409567828BLCAFemale-baised eQTL
rs4362054chr10:22027183:T:C--0.09879889387767040.0461099239566449BLCAFemale-baised eQTL
rs3858190chr10:17498371:G:A-0.1279048163807140.0475052498663165BLCAFemale-baised eQTL
rs7098654chr10:7779230:A:G--0.09449825257585640.0483303878968068BLCAFemale-baised eQTL
rs10740998chr10:22022376:T:C--0.09879746133494690.0493916385493474BLCAFemale-baised eQTL
rs7898914chr10:22038392:A:G--0.09833678098977820.0497458019424858BLCAFemale-baised eQTL
rs112255861chr10:8155975:G:A-0.07141126502203810.0261273676451663LUADFemale-baised eQTL
rs79328229chr10:8156227:C:T-0.07141126502203810.0261273676451663LUADFemale-baised eQTL
rs17448742chr10:8157028:A:T-0.070302795765170.028199381495874LUADFemale-baised eQTL
rs61835509chr10:8160286:C:A-0.06983523619662030.0303785885564451LUADFemale-baised eQTL
rs79694956chr10:8171758:C:T-0.07038219625809140.0305587808088049LUADFemale-baised eQTL
rs112591670chr10:8179695:C:T-0.07160302871050460.0305729771057075LUADFemale-baised eQTL
rs144959133chr10:8179727:C:T-0.07160302871050460.0305729771057075LUADFemale-baised eQTL
rs147950758chr10:8179728:G:A-0.07160302871050460.0305729771057075LUADFemale-baised eQTL
rs113147002chr10:8179767:A:C-0.07160302871050460.0305729771057075LUADFemale-baised eQTL
rs11595823chr10:8169544:A:G-0.07032905044645110.0307989786364243LUADFemale-baised eQTL
rs925308chr10:8170249:T:A-0.07032905044645110.0307989786364243LUADFemale-baised eQTL
rs79551343chr10:8153076:T:C-0.0683166249155520.0382387773335067LUADFemale-baised eQTL
rs75445407chr10:8153281:A:T-0.0683166249155520.0382387773335067LUADFemale-baised eQTL
rs112108577chr10:8153371:T:C-0.0683166249155520.0382387773335067LUADFemale-baised eQTL
rs113004054chr10:8153953:G:C-0.0683166249155520.0382387773335067LUADFemale-baised eQTL
rs17376570chr10:8153986:T:C-0.0683166249155520.0382387773335067LUADFemale-baised eQTL
rs113460746chr10:8154390:G:A-0.0683166249155520.0382387773335067LUADFemale-baised eQTL
rs374564896chr10:8154402:C:T-0.0683166249155520.0382387773335067LUADFemale-baised eQTL
rs77991746chr10:8172742:C:T-0.06811821257083740.0389383547193596LUADFemale-baised eQTL
rs111235588chr10:8173004:G:T-0.06811821257083740.0389383547193596LUADFemale-baised eQTL
rs77603728chr10:8173568:C:G-0.06811821257083740.0389383547193596LUADFemale-baised eQTL
rs11599087chr10:8174749:A:T-0.06786038858603570.0402659196840415LUADFemale-baised eQTL
rs4749660chr10:8151427:G:A-0.06850622071068030.0403598978630041LUADFemale-baised eQTL
rs11592333chr10:8152143:T:C-0.06850622071068030.0403598978630041LUADFemale-baised eQTL
rs4747749chr10:8178921:A:G-0.0689308371741270.0411278731582074LUADFemale-baised eQTL
rs113839996chr10:8179835:T:C-0.0689308371741270.0411278731582074LUADFemale-baised eQTL
rs113162215chr10:8179870:A:T-0.0689308371741270.0411278731582074LUADFemale-baised eQTL
rs113697874chr10:8180085:G:A-0.0689308371741270.0411278731582074LUADFemale-baised eQTL
rs113676121chr10:8160933:C:T-0.06772496088201960.041447754890811LUADFemale-baised eQTL
rs78683697chr10:8162316:G:T-0.06772496088201960.041447754890811LUADFemale-baised eQTL
rs113197820chr10:8163185:C:T-0.06817569325926130.0421149868140583LUADFemale-baised eQTL
rs78238050chr10:8163487:G:C-0.06817569325926130.0421149868140583LUADFemale-baised eQTL
rs17449373chr10:8164643:T:C-0.06817569325926130.0421149868140583LUADFemale-baised eQTL
rs4749667chr10:8167742:C:T-0.06817569325926130.0421149868140583LUADFemale-baised eQTL
rs4749673chr10:8177421:A:G-0.06870570710855090.042299374019736LUADFemale-baised eQTL
rs4749674chr10:8177451:T:C-0.06870570710855090.042299374019736LUADFemale-baised eQTL
rs4749675chr10:8177525:T:C-0.06870570710855090.042299374019736LUADFemale-baised eQTL
rs1509968chr10:8181117:C:T-0.06808069317581890.0426908413836883LUADFemale-baised eQTL
rs17450067chr10:8182228:G:A-0.06808069317581890.0426908413836883LUADFemale-baised eQTL
rs17450095chr10:8182298:T:G-0.06808069317581890.0426908413836883LUADFemale-baised eQTL
rs4749680chr10:8182141:A:C-0.06629323000003440.0442218652793137LUADFemale-baised eQTL
rs4749677chr10:8178351:C:A-0.06836295781697820.0445058442426436LUADFemale-baised eQTL

check buttonFemale-specific eQTL regulation.
SNP IDSNP InfoPosition to GeneEffect ScoreFDRCancer TypeBiased Type
rs80254498chr10:25628569:C:T-0.06285612354302840.00168824896738169BLCAMale-baised eQTL
rs117321015chr10:25628340:A:T-0.06065517214562810.00257996423457458BLCAMale-baised eQTL
rs117120455chr10:25620860:C:T-0.04858366468560450.0230830485851794BLCAMale-baised eQTL
rs146494715chr10:25620970:G:T-0.04858366468560450.0230830485851794BLCAMale-baised eQTL
rs5003418chr10:16153168:C:T-0.0486587070775220.0201547343879843LUADMale-baised eQTL
rs1953955chr10:16153352:A:T-0.0486587070775220.0201547343879843LUADMale-baised eQTL
rs61841846chr10:16152091:A:G-0.04869658157639450.020362393080065LUADMale-baised eQTL
rs12359117chr10:16152159:A:G-0.04869658157639450.020362393080065LUADMale-baised eQTL
rs11253827chr10:16156731:T:C-0.04852694644260210.0214625358968056LUADMale-baised eQTL
rs2226024chr10:16156981:A:G-0.04796671177870740.0243959911525797LUADMale-baised eQTL
rs1953954chr10:16153449:G:A-0.04641155739630890.0320297212134752LUADMale-baised eQTL
rs11253826chr10:16156011:G:T-0.04589742650466220.0369024789738732LUADMale-baised eQTL
rs12357014chr10:16154260:G:A-0.04439580044210070.0478700049116434LUADMale-baised eQTL
rs12358557chr10:16154269:T:C-0.04439580044210070.0478700049116434LUADMale-baised eQTL
rs12357007chr10:16154323:C:T-0.04439580044210070.0478700049116434LUADMale-baised eQTL
rs61841847chr10:16155207:C:G-0.04439580044210070.0478700049116434LUADMale-baised eQTL
rs11253822chr10:16155268:C:A-0.04439580044210070.0478700049116434LUADMale-baised eQTL
rs11253823chr10:16155434:T:C-0.04439580044210070.0478700049116434LUADMale-baised eQTL
rs11253824chr10:16155449:C:G-0.04439580044210070.0478700049116434LUADMale-baised eQTL
rs41382649chr10:7641910:A:T-0.09594523286627589.58666098245137e-05COADMale-baised eQTL
rs2497800chr10:18062132:C:T-0.1372929772418020.000933051524520989COADMale-baised eQTL
rs2488156chr10:18072466:C:T-0.1346821117002610.00131350714099399COADMale-baised eQTL
rs2497804chr10:18065198:T:C-0.1314668773442460.00167459254872609COADMale-baised eQTL
rs2497812chr10:18072908:G:A-0.1291873973122010.00227962442060423COADMale-baised eQTL
rs2497808chr10:18069674:G:A-0.1239670238106430.00375424461411621COADMale-baised eQTL
rs2497809chr10:18071315:A:G-0.1239670238106430.00375424461411621COADMale-baised eQTL
rs2497810chr10:18071575:C:G-0.1239670238106430.00375424461411621COADMale-baised eQTL
rs2497813chr10:18073056:A:G-0.1214128191512210.00516045114776712COADMale-baised eQTL
rs17327001chr10:14184653:G:A-0.07216777563260560.0104929519687576COADMale-baised eQTL
rs1150029chr10:9322954:T:C-0.05413407344937330.0174123008906132COADMale-baised eQTL
rs1150036chr10:9327350:A:G-0.05413407344937330.0174123008906132COADMale-baised eQTL
rs827916chr10:9344110:C:T--0.05554543829728630.0199959898791715COADMale-baised eQTL
rs10905540chr10:9342554:G:A-0.05342912852560620.0209775802017265COADMale-baised eQTL
rs1150047chr10:9337629:C:T-0.05338696439501660.0237368163091784COADMale-baised eQTL
rs17156739chr10:15470601:A:G-0.1032756281831160.0241947394775632COADMale-baised eQTL
rs1150034chr10:9326916:T:C-0.05245208730167840.0282892432960224COADMale-baised eQTL
rs11257831chr10:12497233:C:G-0.05901512444725090.0310228222935673COADMale-baised eQTL
rs12784757chr10:9404250:C:T--0.05427916535583950.0311144599102697COADMale-baised eQTL
rs1150044chr10:9334013:G:A-0.05185441001075570.0339293780568476COADMale-baised eQTL
rs1150028chr10:9322437:A:G-0.05115883352777030.0346216283508323COADMale-baised eQTL
rs1150031chr10:9323511:C:A-0.05115883352777030.0346216283508323COADMale-baised eQTL
rs12784138chr10:9339689:G:A--0.05046427293095680.0352262806990143COADMale-baised eQTL
rs2484330chr10:9340207:G:A--0.05046427293095680.0352262806990143COADMale-baised eQTL
rs11256177chr10:9384832:G:C-0.052770440119130.0353986921758873COADMale-baised eQTL
rs2488159chr10:18082062:G:A-0.09468886023591240.0361589161114073COADMale-baised eQTL
rs2497819chr10:18078918:A:C-0.09411481859512990.0378643841718045COADMale-baised eQTL
rs7078980chr10:12496492:G:A-0.05659041809837980.0408720555178504COADMale-baised eQTL
rs2497822chr10:18081041:A:G-0.09407801498511050.0409488910938769COADMale-baised eQTL
rs1591408chr10:9340895:A:G--0.04919447995517520.0417089798325487COADMale-baised eQTL
rs933079chr10:9399855:A:G-0.05218752656847990.0426948126381952COADMale-baised eQTL
rs1242970chr10:9210098:C:T-0.06355758573113510.0435176353557244COADMale-baised eQTL
rs12218720chr10:9383565:A:C-0.05145039177022020.0447684358666837COADMale-baised eQTL
rs10905547chr10:9384563:A:G-0.05145039177022020.0447684358666837COADMale-baised eQTL
rs7095896chr10:14188930:G:C-0.05918500818840340.0447771382267354COADMale-baised eQTL
rs1150027chr10:9321488:G:A-0.049702878147620.0461197366797272COADMale-baised eQTL
rs11259118chr10:14465884:A:C-0.09739970339094840.0464019155334067COADMale-baised eQTL

check buttonOpposite sex-biased eQTL regulation.
SNP IDSNP InfoPosition to GeneMale EffectMale FDRFemale EffectFemale FDRSex-biased Gene in CancerCancer Type

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Sex-biased eQTM regulation of gene

check buttonSex-biased eQTM regulation of gene (The figures only show the pairs with FDR<1e-5. For more information please check the below table).
eQTMDescription

check buttonMale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonFemale-specific eQTM regulation.
CpG SiteCpG PostionPosition to GeneEffect ScoreFDRCor.rCor.PvalueCancer Type

check buttonOpposite sex-biased eQTM regulation.
CpG SiteCpG PostionCpG IslandPosition to GeneMale EffectMale FDRFemale EffectFemale FDRMale CorMale P-valueFemale CorFemale P-valueSex-biased Coding GeneCancer Type

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Sex-biased sQTL regulation of gene

check buttonSex-biased sQTL regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTLDescription

check buttonMale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonFemale-specific sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESEffect ScoreFDRCancer TypeBiased Type

check buttonOpposite sex-biased sQTL regulation.
ES IDSkipped ExonORF AnnoSNP IDSNP InfoSNP Position to ESMale EffectMale FDRFemale EffectFemale FDRCancer Type

Top

Sex-biased sQTM regulation of gene

check buttonSex-biased sQTM regulation of gene (The figures only show the pairs with FDR <1e-5. For more information please check the below table).
sQTMDescription

check buttonMale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonFemale-specific sQTM regulation.
EX IDSkipped ExonCPG SiteCPG PositionPosition to EX EventsEffect ScoreFDRCor.rCor.PvalueORF_annoCancer Type

check buttonOpposite sex-biased sQTM regulation.
EX IDEX InfoSkipped ExonCPG SiteCPG PositionCPG IslandPosition to EX EventsMale EffectMale FDRFemale EffectFemale FDRMale CorrelationMale P-valueFemale CorrelationFemale P-valueORF_annoCancer Type

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Related disease information of VIM

check buttonDiseases associated with this gene (DisGeNET).
Gene IDGene SymbolDisease IDDisease NameNumber of PMIDSource
ENSG00000026025VIMC0006142Malignant neoplasm of breast4CTD_human
ENSG00000026025VIMC0007140Carcinosarcoma1CTD_human
ENSG00000026025VIMC0007621Neoplastic Cell Transformation1CTD_human
ENSG00000026025VIMC0019193Hepatitis, Toxic1CTD_human
ENSG00000026025VIMC0023890Liver Cirrhosis2CTD_human
ENSG00000026025VIMC0023893Liver Cirrhosis, Experimental1CTD_human
ENSG00000026025VIMC0027626Neoplasm Invasiveness1CTD_human
ENSG00000026025VIMC0027627Neoplasm Metastasis1CTD_human
ENSG00000026025VIMC0027720Nephrosis1CTD_human
ENSG00000026025VIMC0029408Degenerative polyarthritis2CTD_human
ENSG00000026025VIMC0031149Peritoneal Neoplasms1CTD_human
ENSG00000026025VIMC0033578Prostatic Neoplasms2CTD_human
ENSG00000026025VIMC0035126Reperfusion Injury1CTD_human
ENSG00000026025VIMC0035309Retinal Diseases1CTD_human
ENSG00000026025VIMC0039101synovial sarcoma1CTD_human
ENSG00000026025VIMC0043094Weight Gain1CTD_human
ENSG00000026025VIMC0085084Motor Neuron Disease1CTD_human
ENSG00000026025VIMC0086543Cataract1CTD_human
ENSG00000026025VIMC0086743Osteoarthrosis Deformans2CTD_human
ENSG00000026025VIMC0154681Anterior Horn Cell Disease1CTD_human
ENSG00000026025VIMC0154682Lateral Sclerosis1CTD_human
ENSG00000026025VIMC0239946Fibrosis, Liver2CTD_human
ENSG00000026025VIMC0270715Degenerative Diseases, Central Nervous System1CTD_human
ENSG00000026025VIMC0270763Familial Motor Neuron Disease1CTD_human
ENSG00000026025VIMC0270764Motor Neuron Disease, Lower1CTD_human
ENSG00000026025VIMC0345967Malignant mesothelioma1CTD_human
ENSG00000026025VIMC0346990Carcinomatosis of peritoneal cavity1CTD_human
ENSG00000026025VIMC0376358Malignant neoplasm of prostate2CTD_human
ENSG00000026025VIMC0521659Motor Neuron Disease, Upper1CTD_human
ENSG00000026025VIMC0524524Pseudoaphakia1CTD_human
ENSG00000026025VIMC0524851Neurodegenerative Disorders1CTD_human
ENSG00000026025VIMC0543858Motor Neuron Disease, Secondary1CTD_human
ENSG00000026025VIMC0678222Breast Carcinoma4CTD_human
ENSG00000026025VIMC0751733Degenerative Diseases, Spinal Cord1CTD_human
ENSG00000026025VIMC0860207Drug-Induced Liver Disease1CTD_human
ENSG00000026025VIMC0948089Acute Coronary Syndrome1CTD_human
ENSG00000026025VIMC1257931Mammary Neoplasms, Human4CTD_human
ENSG00000026025VIMC1262760Hepatitis, Drug-Induced1CTD_human
ENSG00000026025VIMC1458155Mammary Neoplasms4CTD_human
ENSG00000026025VIMC1510497Lens Opacities1CTD_human
ENSG00000026025VIMC1861827Cataract, Nuclear Diffuse Nonprogressive1CTD_human
ENSG00000026025VIMC1862939AMYOTROPHIC LATERAL SCLEROSIS 11CTD_human
ENSG00000026025VIMC1862941Amyotrophic Lateral Sclerosis, Sporadic1CTD_human
ENSG00000026025VIMC3658290Drug-Induced Acute Liver Injury1CTD_human
ENSG00000026025VIMC4277682Chemical and Drug Induced Liver Injury1CTD_human
ENSG00000026025VIMC4279912Chemically-Induced Liver Toxicity1CTD_human
ENSG00000026025VIMC4551993Amyotrophic Lateral Sclerosis, Familial1CTD_human
ENSG00000026025VIMC4704874Mammary Carcinoma, Human4CTD_human