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	Gene summary
	Spatial pattern genes
	Spatial pattern pathway
	Cell cell interactions using single cell data
	Cell-cell/spot-spot interactions using spatial data
	Transcription factors events
	Related drugs with this gene
	Related diseases with this gene

Spatial pattern gene: Larp6 (spascer ID:67557)

Gene summary for Larp6

Gene summary

Gene information
	Species	Mouse
	Gene symbol	Larp6
	Gene ID	67557
	Gene name	La ribonucleoprotein domain family, member 6
	Synonyms	5430431G03Rik\|AI552438\|Achn
	Cytomap	9\|9 B
	Type of gene	protein-coding
	Description	la-related protein 6acheron
	Modification date	20220424
	UniProtAcc	Q8BN59

Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).

Gene	GO ID	GO term	PubMed ID	Category
Larp6	GO:0003723	RNA binding	21873635	Function
Larp6	GO:0003729	mRNA binding	21873635	Function
Larp6	GO:0005634	nucleus	21873635	Component
Larp6	GO:0005844	polysome	21873635	Component

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Spatial pattern events for Larp6

spatial pattern gene list.

Gene symbol	Species	Tissue	Replication	PMID	Adj p-value
Larp6	Mouse	Brain	rep_1	35141374	4.09e-06
Larp6	Mouse	Brain	rep_2	35141374	4.11e-08
Larp6	Mouse	Kidney	CLP	34003797	2.19e-15
Larp6	Mouse	Brain	rep_1	33469025	9.20e-11
Larp6	Mouse	Brain	rep_2	35027729	2.83e-15
Larp6	Mouse	Brain	rep_3	35027729	9.81e-13
Larp6	Mouse	Brain	rep_5	35027729	1.46e-06
Larp6	Mouse	Testicle	rep_4	34731600	8.92e-15

spatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)	Singel gene map
Brain_rep_1_H&E
Brain_rep_2_H&E
Kidney_CLP_H&E
Brain_rep_1_H&E
Brain_rep_2_H&E
Brain_rep_3_H&E
Brain_rep_5_H&E

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Spatial pattern pathway has Larp6 envolved

Symbol	Pathway	Species	Tissue type	Replication	P-value
Larp6	GOBP_Positive_Regulation_Of_Binding	Mouse	Spinal cord	CN94_E1	2.3e-06
Larp6	GOBP_Regulation_Of_Binding	Mouse	Spinal cord	CN94_E1	1.4e-06
Larp6	GOBP_Positive_Regulation_Of_Gene_Expression	Mouse	Spinal cord	L7bCN02_E1	7.5e-06
Larp6	GOBP_Amide_Biosynthetic_Process	Mouse	Spinal cord	L7CN45_C1	2.2e-09
Larp6	GOBP_Cellular_Amide_Metabolic_Process	Mouse	Spinal cord	L7CN45_C1	3.4e-09
Larp6	GOBP_Collagen_Biosynthetic_Process	Mouse	Spinal cord	L7CN45_C1	2.8e-10
Larp6	GOBP_Collagen_Metabolic_Process	Mouse	Spinal cord	L7CN45_C1	1.4e-08
Larp6	GOBP_Organonitrogen_Compound_Biosynthetic_Process	Mouse	Spinal cord	L7CN45_C1	5.6e-08
Larp6	GOBP_Peptide_Biosynthetic_Process	Mouse	Spinal cord	L7CN45_C1	3.5e-08
Larp6	GOBP_Peptide_Metabolic_Process	Mouse	Spinal cord	L7CN45_C1	3.4e-09
Larp6	GOBP_Positive_Regulation_Of_Cellular_Amide_Metabolic_Process	Mouse	Spinal cord	L7CN45_C1	3.4e-09
Larp6	GOBP_Positive_Regulation_Of_Collagen_Metabolic_Process	Mouse	Spinal cord	L7CN45_C1	3.0e-07
Larp6	GOBP_Positive_Regulation_Of_Molecular_Function	Mouse	Spinal cord	L7CN45_C1	3.2e-07
Larp6	GOBP_Positive_Regulation_Of_Protein_Metabolic_Process	Mouse	Spinal cord	L7CN45_C1	3.2e-07
Larp6	GOBP_Positive_Regulation_Of_Rna_Binding	Mouse	Spinal cord	L7CN45_C1	4.9e-10
Larp6	GOBP_Positive_Regulation_Of_Translation	Mouse	Spinal cord	L7CN45_C1	6.7e-06
Larp6	GOBP_Posttranscriptional_Regulation_Of_Gene_Expression	Mouse	Spinal cord	L7CN45_C1	7.4e-09
Larp6	GOBP_Regulation_Of_Cellular_Amide_Metabolic_Process	Mouse	Spinal cord	L7CN45_C1	2.4e-08
Larp6	GOBP_Regulation_Of_Collagen_Metabolic_Process	Mouse	Spinal cord	L7CN45_C1	2.7e-08
Larp6	GOBP_Regulation_Of_Rna_Binding	Mouse	Spinal cord	L7CN45_C1	3.1e-08
Larp6	GOBP_Rna_Processing	Mouse	Spinal cord	L7CN45_C1	2.2e-09
Larp6	GOBP_Regulation_Of_Mrna_Binding	Mouse	Spinal cord	L7CN47_D1	1.7e-06
Larp6	GOBP_Positive_Regulation_Of_Rna_Binding	Mouse	Brain	rep_1	3.9e-18
Larp6	GOBP_Regulation_Of_Binding	Mouse	Brain	rep_1	3.2e-09
Larp6	GOBP_Regulation_Of_Mrna_Binding	Mouse	Brain	rep_1	1.9e-32
Larp6	GOBP_Regulation_Of_Rna_Binding	Mouse	Brain	rep_1	2.8e-25
Larp6	GOBP_Amide_Biosynthetic_Process	Mouse	Brain	rep_3	2.5e-86
Larp6	GOBP_Cellular_Amide_Metabolic_Process	Mouse	Brain	rep_3	2.1e-87
Larp6	GOBP_Collagen_Biosynthetic_Process	Mouse	Brain	rep_3	5.4e-30
Larp6	GOBP_Collagen_Metabolic_Process	Mouse	Brain	rep_3	3.6e-88
Larp6	GOBP_Organonitrogen_Compound_Biosynthetic_Process	Mouse	Brain	rep_3	2.9e-144
Larp6	GOBP_Peptide_Biosynthetic_Process	Mouse	Brain	rep_3	2.1e-69
Larp6	GOBP_Peptide_Metabolic_Process	Mouse	Brain	rep_3	1.3e-86
Larp6	GOBP_Positive_Regulation_Of_Binding	Mouse	Brain	rep_3	1.6e-131
Larp6	GOBP_Positive_Regulation_Of_Cellular_Amide_Metabolic_Process	Mouse	Brain	rep_3	1.0e-177
Larp6	GOBP_Positive_Regulation_Of_Gene_Expression	Mouse	Brain	rep_3	3.1e-102
Larp6	GOBP_Positive_Regulation_Of_Molecular_Function	Mouse	Brain	rep_3	2.6e-94
Larp6	GOBP_Positive_Regulation_Of_Protein_Metabolic_Process	Mouse	Brain	rep_3	9.9e-174
Larp6	GOBP_Positive_Regulation_Of_Translation	Mouse	Brain	rep_3	8.4e-203
Larp6	GOBP_Posttranscriptional_Regulation_Of_Gene_Expression	Mouse	Brain	rep_3	8.5e-206
Larp6	GOBP_Regulation_Of_Cellular_Amide_Metabolic_Process	Mouse	Brain	rep_3	5.2e-187
Larp6	GOBP_Regulation_Of_Collagen_Metabolic_Process	Mouse	Brain	rep_3	3.0e-73
Larp6	GOBP_Rna_Processing	Mouse	Brain	rep_3	4.3e-140
Larp6	GOBP_Collagen_Biosynthetic_Process	Mouse	Embryo	rep_5	6.9e-09
Larp6	GOBP_Positive_Regulation_Of_Collagen_Metabolic_Process	Mouse	Embryo	rep_5	3.5e-11
Larp6	GOBP_Regulation_Of_Collagen_Metabolic_Process	Mouse	Embryo	rep_5	2.6e-09
Larp6	GOBP_Amide_Biosynthetic_Process	Mouse	Embryo	rep_14	3.7e-18
Larp6	GOBP_Cellular_Amide_Metabolic_Process	Mouse	Embryo	rep_14	4.7e-16
Larp6	GOBP_Organonitrogen_Compound_Biosynthetic_Process	Mouse	Embryo	rep_14	2.4e-12
Larp6	GOBP_Peptide_Biosynthetic_Process	Mouse	Embryo	rep_14	2.8e-15
Larp6	GOBP_Peptide_Metabolic_Process	Mouse	Embryo	rep_14	4.7e-16
Larp6	GOBP_Positive_Regulation_Of_Binding	Mouse	Embryo	rep_14	1.0e-12
Larp6	GOBP_Positive_Regulation_Of_Cellular_Amide_Metabolic_Process	Mouse	Embryo	rep_14	2.1e-12
Larp6	GOBP_Positive_Regulation_Of_Rna_Binding	Mouse	Embryo	rep_14	6.7e-38
Larp6	GOBP_Positive_Regulation_Of_Translation	Mouse	Embryo	rep_14	1.1e-11
Larp6	GOBP_Posttranscriptional_Regulation_Of_Gene_Expression	Mouse	Embryo	rep_14	1.4e-11
Larp6	GOBP_Regulation_Of_Cellular_Amide_Metabolic_Process	Mouse	Embryo	rep_14	9.9e-25
Larp6	GOBP_Regulation_Of_Mrna_Binding	Mouse	Embryo	rep_14	8.1e-39
Larp6	GOBP_Regulation_Of_Rna_Binding	Mouse	Embryo	rep_14	8.8e-45
Larp6	GOBP_Rna_Processing	Mouse	Embryo	rep_14	3.5e-14
Larp6	GOBP_Rna_Processing	Mouse	Embryo	rep_2	2.4e-14
Larp6	GOBP_Positive_Regulation_Of_Gene_Expression	Mouse	Kidney	Nep	4.9e-40
Larp6	GOBP_Positive_Regulation_Of_Molecular_Function	Mouse	Kidney	Nep	1.8e-46
Larp6	GOBP_Positive_Regulation_Of_Protein_Metabolic_Process	Mouse	Kidney	Nep	4.3e-38
Larp6	GOBP_Amide_Biosynthetic_Process	Mouse	Kidney	rep_2	1.9e-84
Larp6	GOBP_Cellular_Amide_Metabolic_Process	Mouse	Kidney	rep_2	2.5e-85
Larp6	GOBP_Collagen_Biosynthetic_Process	Mouse	Kidney	rep_2	8.6e-28
Larp6	GOBP_Collagen_Metabolic_Process	Mouse	Kidney	rep_2	4.6e-51
Larp6	GOBP_Organonitrogen_Compound_Biosynthetic_Process	Mouse	Kidney	rep_2	8.9e-78
Larp6	GOBP_Peptide_Biosynthetic_Process	Mouse	Kidney	rep_2	2.9e-85
Larp6	GOBP_Peptide_Metabolic_Process	Mouse	Kidney	rep_2	1.4e-80
Larp6	GOBP_Positive_Regulation_Of_Binding	Mouse	Kidney	rep_2	7.3e-33
Larp6	GOBP_Positive_Regulation_Of_Cellular_Amide_Metabolic_Process	Mouse	Kidney	rep_2	7.7e-130
Larp6	GOBP_Positive_Regulation_Of_Collagen_Metabolic_Process	Mouse	Kidney	rep_2	6.6e-56
Larp6	GOBP_Positive_Regulation_Of_Gene_Expression	Mouse	Kidney	rep_2	2.1e-103
Larp6	GOBP_Positive_Regulation_Of_Molecular_Function	Mouse	Kidney	rep_2	2.2e-45
Larp6	GOBP_Positive_Regulation_Of_Protein_Metabolic_Process	Mouse	Kidney	rep_2	1.7e-43
Larp6	GOBP_Positive_Regulation_Of_Rna_Binding	Mouse	Kidney	rep_2	7.0e-40
Larp6	GOBP_Positive_Regulation_Of_Translation	Mouse	Kidney	rep_2	9.2e-92
Larp6	GOBP_Posttranscriptional_Regulation_Of_Gene_Expression	Mouse	Kidney	rep_2	1.1e-92
Larp6	GOBP_Regulation_Of_Binding	Mouse	Kidney	rep_2	1.3e-38
Larp6	GOBP_Regulation_Of_Cellular_Amide_Metabolic_Process	Mouse	Kidney	rep_2	9.8e-137
Larp6	GOBP_Regulation_Of_Collagen_Metabolic_Process	Mouse	Kidney	rep_2	1.8e-59
Larp6	GOBP_Regulation_Of_Mrna_Binding	Mouse	Kidney	rep_2	4.6e-62
Larp6	GOBP_Regulation_Of_Rna_Binding	Mouse	Kidney	rep_2	1.3e-65
Larp6	GOBP_Rna_Processing	Mouse	Kidney	rep_2	1.1e-71
Larp6	GOBP_Positive_Regulation_Of_Rna_Binding	Mouse	Liver	CN16-D1	7.0e-12
Larp6	GOBP_Regulation_Of_Mrna_Binding	Mouse	Liver	CN16-D1	1.6e-14
Larp6	GOBP_Collagen_Biosynthetic_Process	Mouse	Liver	CN16-E1	9.2e-07
Larp6	GOBP_Collagen_Metabolic_Process	Mouse	Liver	CN73-C1	5.4e-08
Larp6	GOBP_Regulation_Of_Mrna_Binding	Mouse	Liver	rep_15	2.1e-13
Larp6	GOBP_Collagen_Biosynthetic_Process	Mouse	Liver	rep_16	5.1e-36
Larp6	GOBP_Collagen_Metabolic_Process	Mouse	Liver	rep_16	5.0e-31
Larp6	GOBP_Positive_Regulation_Of_Collagen_Metabolic_Process	Mouse	Liver	rep_16	9.4e-36
Larp6	GOBP_Positive_Regulation_Of_Rna_Binding	Mouse	Liver	rep_16	2.7e-26
Larp6	GOBP_Regulation_Of_Collagen_Metabolic_Process	Mouse	Liver	rep_16	1.8e-28
Larp6	GOBP_Regulation_Of_Rna_Binding	Mouse	Liver	rep_16	2.3e-27
Larp6	GOBP_Amide_Biosynthetic_Process	Mouse	Lymph	MS-1	1.3e-09
Larp6	GOBP_Cellular_Amide_Metabolic_Process	Mouse	Lymph	MS-1	5.8e-11
Larp6	GOBP_Collagen_Biosynthetic_Process	Mouse	Lymph	MS-1	8.0e-07
Larp6	GOBP_Organonitrogen_Compound_Biosynthetic_Process	Mouse	Lymph	MS-1	1.4e-09
Larp6	GOBP_Peptide_Biosynthetic_Process	Mouse	Lymph	MS-1	7.1e-07
Larp6	GOBP_Peptide_Metabolic_Process	Mouse	Lymph	MS-1	5.8e-11
Larp6	GOBP_Positive_Regulation_Of_Binding	Mouse	Lymph	MS-1	1.6e-07
Larp6	GOBP_Positive_Regulation_Of_Gene_Expression	Mouse	Lymph	MS-1	7.3e-12
Larp6	GOBP_Positive_Regulation_Of_Molecular_Function	Mouse	Lymph	MS-1	1.9e-12
Larp6	GOBP_Positive_Regulation_Of_Protein_Metabolic_Process	Mouse	Lymph	MS-1	1.9e-12
Larp6	GOBP_Posttranscriptional_Regulation_Of_Gene_Expression	Mouse	Lymph	MS-1	7.1e-09
Larp6	GOBP_Regulation_Of_Binding	Mouse	Lymph	MS-1	1.9e-09
Larp6	GOBP_Regulation_Of_Cellular_Amide_Metabolic_Process	Mouse	Lymph	MS-1	2.1e-08
Larp6	GOBP_Regulation_Of_Collagen_Metabolic_Process	Mouse	Lymph	MS-1	1.0e-07
Larp6	GOBP_Rna_Processing	Mouse	Lymph	MS-1	2.0e-09
Larp6	GOBP_Positive_Regulation_Of_Rna_Binding	Mouse	Lymph	MS-2	6.5e-07
Larp6	GOBP_Collagen_Biosynthetic_Process	Mouse	Lung	rep_1	1.7e-14
Larp6	GOBP_Positive_Regulation_Of_Collagen_Metabolic_Process	Mouse	Lung	rep_1	3.4e-10
Larp6	GOBP_Posttranscriptional_Regulation_Of_Gene_Expression	Mouse	Lung	rep_1	1.6e-15
Larp6	GOBP_Collagen_Biosynthetic_Process	Mouse	Brain	rep_4	4.1e-09
Larp6	GOBP_Positive_Regulation_Of_Rna_Binding	Mouse	Brain	HP_ad_rep3	3.2e-08
Larp6	GOBP_Regulation_Of_Mrna_Binding	Mouse	Brain	HP_ad_rep3	1.2e-12
Larp6	GOBP_Amide_Biosynthetic_Process	Mouse	Brain	HP_ad_rep7	8.0e-10
Larp6	GOBP_Cellular_Amide_Metabolic_Process	Mouse	Brain	HP_ad_rep7	5.6e-11
Larp6	GOBP_Organonitrogen_Compound_Biosynthetic_Process	Mouse	Brain	HP_ad_rep7	2.8e-08
Larp6	GOBP_Peptide_Biosynthetic_Process	Mouse	Brain	HP_ad_rep7	4.4e-10
Larp6	GOBP_Peptide_Metabolic_Process	Mouse	Brain	HP_ad_rep7	2.8e-10
Larp6	GOBP_Positive_Regulation_Of_Gene_Expression	Mouse	Brain	HP_ad_rep7	4.4e-07
Larp6	GOBP_Positive_Regulation_Of_Molecular_Function	Mouse	Brain	HP_ad_rep7	2.8e-07
Larp6	GOBP_Positive_Regulation_Of_Translation	Mouse	Brain	HP_ad_rep7	6.6e-08
Larp6	GOBP_Posttranscriptional_Regulation_Of_Gene_Expression	Mouse	Brain	HP_ad_rep7	1.9e-10
Larp6	GOBP_Regulation_Of_Cellular_Amide_Metabolic_Process	Mouse	Brain	HP_ad_rep7	5.9e-07
Larp6	GOBP_Regulation_Of_Rna_Binding	Mouse	Brain	HP_ad_rep7	8.0e-11
Larp6	GOBP_Rna_Processing	Mouse	Brain	HP_ad_rep7	2.7e-09
Larp6	GOBP_Collagen_Metabolic_Process	Mouse	Brain	HP_adpolb_rep1	3.7e-07
Larp6	GOBP_Positive_Regulation_Of_Collagen_Metabolic_Process	Mouse	Brain	HP_adpolb_rep1	9.9e-10
Larp6	GOBP_Regulation_Of_Collagen_Metabolic_Process	Mouse	Brain	HP_adpolb_rep1	5.8e-10
Larp6	GOBP_Collagen_Biosynthetic_Process	Mouse	Brain	HP_polb_rep9	2.4e-07
Larp6	GOBP_Positive_Regulation_Of_Binding	Mouse	Brain	HP_polb_rep9	2.9e-09
Larp6	GOBP_Positive_Regulation_Of_Cellular_Amide_Metabolic_Process	Mouse	Brain	HP_polb_rep9	5.6e-07
Larp6	GOBP_Positive_Regulation_Of_Protein_Metabolic_Process	Mouse	Brain	HP_polb_rep9	6.0e-11
Larp6	GOBP_Regulation_Of_Binding	Mouse	Brain	HP_polb_rep9	4.0e-08

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Larp6 function as liang/receptor in single cell data

Tissue

Source

SourceCell

Target

TargetCell

PMID

Group

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Larp6 function as liang/receptor across spatial transcriptomics tissue

Interactions using deconvoluted spatial data.

Ligand

Receptor

LR pair

Tissue

Replication

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Transcription factor for Larp6 envolved

Transcription factor analysis using single cell data.

Tissue

Group

Cell types

Target genes

Rss score

Motif information.

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Related Drugs for Larp6

Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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Related Diseases for Larp6

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

Pubmeds

Source