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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

Spatial pattern genes

Soverview

Spatial pattern pathway

Soverview

Cell cell interactions using single cell data

Soverview

Cell-cell/spot-spot interactions using spatial data

Soverview

Transcription factors events

Soverview

Related drugs with this gene

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Related diseases with this gene

Spatial pattern gene: Tmed9 (spascer ID:67511)

Gene summary for Tmed9

check button Gene summary
Gene information
SpeciesMouse
Gene symbol

Tmed9

Gene ID

67511

Gene nametransmembrane p24 trafficking protein 9
Synonyms2400003B06Rik
Cytomap13|13 B1
Type of geneprotein-coding
Descriptiontransmembrane emp24 domain-containing protein 9glycoprotein 25L2p24 family protein alpha-2p24alpha2transmembrane emp24 protein transport domain containing 9
Modification date20220424
UniProtAcc

Q99KF1


check button Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).
GeneGO IDGO termPubMed IDCategory
Tmed9

GO:0005783

endoplasmic reticulum

21873635

Component
Tmed9

GO:0005793

endoplasmic reticulum-Golgi intermediate compartment

21873635

Component
Tmed9

GO:0005794

Golgi apparatus

21873635

Component
Tmed9

GO:0006886

intracellular protein transport

21873635

Process
Tmed9

GO:0006888

endoplasmic reticulum to Golgi vesicle-mediated transport

21873635

Process
Tmed9

GO:0007030

Golgi organization

21873635

Process
Tmed9

GO:0030134

COPII-coated ER to Golgi transport vesicle

21873635

Component
Tmed9

GO:0048205

COPI coating of Golgi vesicle

21873635

Process

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Spatial pattern events for Tmed9

check buttonspatial pattern gene list.
Gene symbolSpeciesTissueReplicationPMIDAdj p-value
Tmed9MouseBrainS1 344135152.07e-15
Tmed9MouseBrainS2 344135151.56e-15
Tmed9MouseBrainS3 344135153.15e-07
Tmed9MouseBrainS4 344135151.37e-15
Tmed9MouseBrainS6 344135151.46e-15
Tmed9MouseBrainS7 344135151.55e-15
Tmed9MouseBrainrep_1 351413742.02e-15
Tmed9MouseBrainrep_2 351413743.05e-15
Tmed9MouseBrainrep_3 351413743.00e-15
Tmed9MouseBrainrep_4 351413741.57e-15
Tmed9MouseBrainrep_5 351413746.30e-09
Tmed9MouseBrainrep_6 351413743.33e-13
Tmed9MouseEmbryorep_5 331887763.49e-06
Tmed9MouseKidneyCLP 340037972.19e-15
Tmed9MouseKidneyIRI 340037972.29e-15
Tmed9MouseKidneySham 340037972.58e-15
Tmed9MouseKidneyrep_1 348531512.35e-11
Tmed9MouseKidneyrep_3 348531517.57e-09
Tmed9MouseKidneyrep_4 348531512.99e-06
Tmed9MouseKidneyrep_5 348531511.30e-10
Tmed9MouseBrainrep_1 334690252.84e-09
Tmed9MouseBrainrep_1 350277291.96e-14
Tmed9MouseBrainrep_2 350277293.13e-09
Tmed9MouseBrainrep_3 350277293.45e-12
Tmed9MouseBrainrep_4 350277293.10e-15
Tmed9MouseBrainrep_5 350277292.62e-15
Tmed9MouseIntestinerep_1 351497217.65e-10
Tmed9MouseIntestinerep_2 351497215.49e-15
Tmed9MouseIntestinerep_3 351497212.20e-10
Tmed9MouseIntestinerep_4 351497212.30e-15
Tmed9MouseLymphA1 03.29e-15
Tmed9MouseLymphB1 03.66e-15
Tmed9MouseLungrep_4 352908017.63e-07
Tmed9MouseBrainrep_2 352106249.72e-06

check buttonspatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)Singel gene map
Brain_rep_1_H&E
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Brain_rep_2_H&E
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Brain_rep_3_H&E
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Brain_rep_4_H&E
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Brain_rep_5_H&E
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Brain_rep_6_H&E
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Kidney_CLP_H&E
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Kidney_IRI_H&E
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Kidney_Sham_H&E
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Kidney_rep_1_H&E
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Kidney_rep_3_H&E
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Kidney_rep_4_H&E
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Kidney_rep_5_H&E
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Brain_rep_1_H&E
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Brain_rep_1_H&E
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Brain_rep_2_H&E
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Brain_rep_3_H&E
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Brain_rep_4_H&E
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Brain_rep_5_H&E
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Lung_rep_4_H&E
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Spatial pattern pathway has Tmed9 envolved


SymbolPathwaySpeciesTissue typeReplicationP-value
Tmed9GOBP_Cellular_Macromolecule_LocalizationMouseSpinal cordL7CN45_C1 4.2e-07
Tmed9GOBP_Endomembrane_System_OrganizationMouseSpinal cordL7CN45_C1 1.0e-06
Tmed9GOBP_Endoplasmic_Reticulum_To_Golgi_Vesicle_Mediated_TransportMouseSpinal cordL7CN45_C1 7.4e-08
Tmed9GOBP_Establishment_Of_Organelle_LocalizationMouseSpinal cordL7CN45_C1 7.1e-07
Tmed9GOBP_Establishment_Of_Protein_LocalizationMouseSpinal cordL7CN45_C1 4.4e-06
Tmed9GOBP_Golgi_OrganizationMouseSpinal cordL7CN45_C1 4.2e-07
Tmed9GOBP_Golgi_Vesicle_BuddingMouseSpinal cordL7CN45_C1 8.7e-07
Tmed9GOBP_Golgi_Vesicle_TransportMouseSpinal cordL7CN45_C1 3.6e-07
Tmed9GOBP_Intracellular_Protein_TransportMouseSpinal cordL7CN45_C1 3.6e-07
Tmed9GOBP_Intracellular_TransportMouseSpinal cordL7CN45_C1 4.4e-06
Tmed9GOBP_Membrane_OrganizationMouseSpinal cordL7CN45_C1 2.7e-07
Tmed9GOBP_Organelle_LocalizationMouseSpinal cordL7CN45_C1 1.4e-08
Tmed9GOBP_Positive_Regulation_Of_Cellular_Component_OrganizationMouseSpinal cordL7CN45_C1 3.0e-06
Tmed9GOBP_Vesicle_Budding_From_MembraneMouseSpinal cordL7CN45_C1 5.9e-06
Tmed9GOBP_Vesicle_LocalizationMouseSpinal cordL7CN45_C1 8.0e-08
Tmed9GOBP_Vesicle_OrganizationMouseSpinal cordL7CN45_C1 7.6e-07
Tmed9GOBP_Vesicle_TargetingMouseSpinal cordL7CN45_C1 1.7e-07
Tmed9GOBP_Vesicle_Targeting_To_From_Or_Within_GolgiMouseSpinal cordL7CN45_C1 6.1e-09
Tmed9GOBP_Copi_Coated_Vesicle_BuddingMouseSpinal cordL7CN47_C1 2.4e-06
Tmed9GOBP_Retrograde_Vesicle_Mediated_Transport_Golgi_To_Endoplasmic_ReticulumMouseSpinal cordL7CN47_C1 5.1e-06
Tmed9GOBP_Golgi_OrganizationMouseBrainrep_27 5.4e-06
Tmed9GOBP_Golgi_Vesicle_TransportMouseBrainrep_27 5.1e-06
Tmed9GOBP_Vesicle_TargetingMouseBrainrep_27 5.7e-07
Tmed9GOBP_Golgi_Vesicle_BuddingMouseBrainrep_41 3.4e-05
Tmed9GOBP_Endomembrane_System_OrganizationMouseBrainrep_1 7.8e-10
Tmed9GOBP_Establishment_Of_Organelle_LocalizationMouseBrainrep_1 1.4e-37
Tmed9GOBP_Establishment_Of_Protein_LocalizationMouseBrainrep_1 6.6e-07
Tmed9GOBP_Golgi_OrganizationMouseBrainrep_1 5.5e-18
Tmed9GOBP_Golgi_Vesicle_TransportMouseBrainrep_1 1.2e-15
Tmed9GOBP_Organelle_LocalizationMouseBrainrep_1 1.6e-45
Tmed9GOBP_Positive_Regulation_Of_Organelle_OrganizationMouseBrainrep_1 2.2e-17
Tmed9GOBP_Regulation_Of_Organelle_OrganizationMouseBrainrep_1 7.9e-20
Tmed9GOBP_Retrograde_Vesicle_Mediated_Transport_Golgi_To_Endoplasmic_ReticulumMouseBrainrep_1 2.4e-31
Tmed9GOBP_Vesicle_Budding_From_MembraneMouseBrainrep_1 6.9e-16
Tmed9GOBP_Vesicle_LocalizationMouseBrainrep_1 1.6e-38
Tmed9GOBP_Vesicle_OrganizationMouseBrainrep_1 7.9e-37
Tmed9GOBP_Cellular_Macromolecule_LocalizationMouseBrainrep_31.6e-125
Tmed9GOBP_Copi_Coated_Vesicle_BuddingMouseBrainrep_3 5.6e-96
Tmed9GOBP_Endoplasmic_Reticulum_To_Golgi_Vesicle_Mediated_TransportMouseBrainrep_37.6e-183
Tmed9GOBP_Golgi_Vesicle_BuddingMouseBrainrep_32.3e-107
Tmed9GOBP_Intracellular_Protein_TransportMouseBrainrep_32.7e-132
Tmed9GOBP_Intracellular_TransportMouseBrainrep_31.0e-102
Tmed9GOBP_Membrane_OrganizationMouseBrainrep_3 1.9e-41
Tmed9GOBP_Positive_Regulation_Of_Cellular_Component_OrganizationMouseBrainrep_3 7.0e-65
Tmed9GOBP_Vesicle_TargetingMouseBrainrep_32.4e-123
Tmed9GOBP_Vesicle_Targeting_To_From_Or_Within_GolgiMouseBrainrep_3 7.2e-83
Tmed9GOBP_Vesicle_Targeting_To_From_Or_Within_GolgiMouseEmbryorep_6 4.2e-09
Tmed9GOBP_Copi_Coated_Vesicle_BuddingMouseEmbryorep_14 5.4e-44
Tmed9GOBP_Endoplasmic_Reticulum_To_Golgi_Vesicle_Mediated_TransportMouseEmbryorep_14 4.4e-33
Tmed9GOBP_Golgi_Vesicle_BuddingMouseEmbryorep_14 1.4e-35
Tmed9GOBP_Golgi_Vesicle_TransportMouseEmbryorep_14 5.7e-09
Tmed9GOBP_Retrograde_Vesicle_Mediated_Transport_Golgi_To_Endoplasmic_ReticulumMouseEmbryorep_14 5.9e-39
Tmed9GOBP_Vesicle_TargetingMouseEmbryorep_14 3.2e-42
Tmed9GOBP_Cellular_Macromolecule_LocalizationMouseEmbryorep_2 5.5e-15
Tmed9GOBP_Positive_Regulation_Of_Cellular_Component_OrganizationMouseEmbryorep_2 2.3e-14
Tmed9GOBP_Regulation_Of_Organelle_OrganizationMouseEmbryorep_3 1.3e-27
Tmed9GOBP_Vesicle_LocalizationMouseEmbryorep_3 1.5e-30
Tmed9GOBP_Intracellular_Protein_TransportMouseEmbryorep_4 1.1e-39
Tmed9GOBP_Cellular_Macromolecule_LocalizationMouseKidneyrep_2 3.5e-61
Tmed9GOBP_Copi_Coated_Vesicle_BuddingMouseKidneyrep_25.0e-102
Tmed9GOBP_Endomembrane_System_OrganizationMouseKidneyrep_21.0e-161
Tmed9GOBP_Endoplasmic_Reticulum_To_Golgi_Vesicle_Mediated_TransportMouseKidneyrep_2 1.8e-93
Tmed9GOBP_Establishment_Of_Organelle_LocalizationMouseKidneyrep_2 6.6e-67
Tmed9GOBP_Establishment_Of_Protein_LocalizationMouseKidneyrep_2 9.8e-86
Tmed9GOBP_Golgi_OrganizationMouseKidneyrep_2 3.2e-78
Tmed9GOBP_Golgi_Vesicle_BuddingMouseKidneyrep_23.8e-107
Tmed9GOBP_Golgi_Vesicle_TransportMouseKidneyrep_26.5e-131
Tmed9GOBP_Intracellular_Protein_TransportMouseKidneyrep_2 7.5e-54
Tmed9GOBP_Intracellular_TransportMouseKidneyrep_2 7.9e-80
Tmed9GOBP_Membrane_OrganizationMouseKidneyrep_2 8.5e-74
Tmed9GOBP_Organelle_LocalizationMouseKidneyrep_2 2.9e-72
Tmed9GOBP_Positive_Regulation_Of_Cellular_Component_OrganizationMouseKidneyrep_2 2.4e-38
Tmed9GOBP_Positive_Regulation_Of_Organelle_OrganizationMouseKidneyrep_2 4.1e-12
Tmed9GOBP_Regulation_Of_Organelle_OrganizationMouseKidneyrep_2 6.7e-77
Tmed9GOBP_Retrograde_Vesicle_Mediated_Transport_Golgi_To_Endoplasmic_ReticulumMouseKidneyrep_2 3.5e-85
Tmed9GOBP_Vesicle_Budding_From_MembraneMouseKidneyrep_2 8.9e-28
Tmed9GOBP_Vesicle_LocalizationMouseKidneyrep_2 1.6e-76
Tmed9GOBP_Vesicle_OrganizationMouseKidneyrep_2 6.0e-62
Tmed9GOBP_Vesicle_TargetingMouseKidneyrep_2 7.5e-97
Tmed9GOBP_Vesicle_Targeting_To_From_Or_Within_GolgiMouseKidneyrep_2 3.7e-76
Tmed9GOBP_Organelle_LocalizationMouseLiverrep_16 2.2e-21
Tmed9GOBP_Cellular_Macromolecule_LocalizationMouseLymphMS-1 1.1e-11
Tmed9GOBP_Copi_Coated_Vesicle_BuddingMouseLymphMS-1 1.4e-11
Tmed9GOBP_Endomembrane_System_OrganizationMouseLymphMS-1 2.5e-09
Tmed9GOBP_Endoplasmic_Reticulum_To_Golgi_Vesicle_Mediated_TransportMouseLymphMS-1 4.3e-11
Tmed9GOBP_Establishment_Of_Organelle_LocalizationMouseLymphMS-1 8.3e-07
Tmed9GOBP_Establishment_Of_Protein_LocalizationMouseLymphMS-1 2.5e-11
Tmed9GOBP_Golgi_OrganizationMouseLymphMS-1 9.6e-08
Tmed9GOBP_Golgi_Vesicle_BuddingMouseLymphMS-1 4.2e-11
Tmed9GOBP_Golgi_Vesicle_TransportMouseLymphMS-1 5.2e-08
Tmed9GOBP_Intracellular_Protein_TransportMouseLymphMS-1 3.0e-17
Tmed9GOBP_Intracellular_TransportMouseLymphMS-1 3.3e-11
Tmed9GOBP_Membrane_OrganizationMouseLymphMS-1 5.8e-20
Tmed9GOBP_Positive_Regulation_Of_Cellular_Component_OrganizationMouseLymphMS-1 1.8e-09
Tmed9GOBP_Positive_Regulation_Of_Organelle_OrganizationMouseLymphMS-1 2.8e-08
Tmed9GOBP_Regulation_Of_Organelle_OrganizationMouseLymphMS-1 1.4e-10
Tmed9GOBP_Retrograde_Vesicle_Mediated_Transport_Golgi_To_Endoplasmic_ReticulumMouseLymphMS-1 4.2e-07
Tmed9GOBP_Vesicle_Budding_From_MembraneMouseLymphMS-1 7.9e-13
Tmed9GOBP_Vesicle_LocalizationMouseLymphMS-1 8.5e-08
Tmed9GOBP_Vesicle_OrganizationMouseLymphMS-1 1.9e-12
Tmed9GOBP_Vesicle_Targeting_To_From_Or_Within_GolgiMouseLymphMS-1 1.6e-10
Tmed9GOBP_Establishment_Of_Organelle_LocalizationMouseBrainrep_4 1.2e-42
Tmed9GOBP_Organelle_LocalizationMouseBrainrep_4 3.3e-19
Tmed9GOBP_Retrograde_Vesicle_Mediated_Transport_Golgi_To_Endoplasmic_ReticulumMouseBrainrep_4 1.1e-19
Tmed9GOBP_Vesicle_LocalizationMouseBrainrep_4 1.8e-51
Tmed9GOBP_Vesicle_OrganizationMouseBrainrep_4 7.9e-08
Tmed9GOBP_Vesicle_TargetingMouseBrainrep_4 6.5e-08
Tmed9GOBP_Vesicle_Targeting_To_From_Or_Within_GolgiMouseBrainrep_7 3.7e-11
Tmed9GOBP_Copi_Coated_Vesicle_BuddingMouseBrainHP_ad_rep2 2.7e-07
Tmed9GOBP_Cellular_Macromolecule_LocalizationMouseBrainHP_ad_rep7 6.6e-10
Tmed9GOBP_Endoplasmic_Reticulum_To_Golgi_Vesicle_Mediated_TransportMouseBrainHP_ad_rep7 6.3e-08
Tmed9GOBP_Establishment_Of_Organelle_LocalizationMouseBrainHP_ad_rep7 4.5e-08
Tmed9GOBP_Establishment_Of_Protein_LocalizationMouseBrainHP_ad_rep7 8.7e-10
Tmed9GOBP_Golgi_OrganizationMouseBrainHP_ad_rep7 2.6e-07
Tmed9GOBP_Golgi_Vesicle_BuddingMouseBrainHP_ad_rep7 2.1e-10
Tmed9GOBP_Golgi_Vesicle_TransportMouseBrainHP_ad_rep7 1.1e-09
Tmed9GOBP_Intracellular_Protein_TransportMouseBrainHP_ad_rep7 3.6e-08
Tmed9GOBP_Intracellular_TransportMouseBrainHP_ad_rep7 3.1e-08
Tmed9GOBP_Positive_Regulation_Of_Cellular_Component_OrganizationMouseBrainHP_ad_rep7 2.0e-07
Tmed9GOBP_Positive_Regulation_Of_Organelle_OrganizationMouseBrainHP_ad_rep7 3.5e-08
Tmed9GOBP_Regulation_Of_Organelle_OrganizationMouseBrainHP_ad_rep7 8.1e-07
Tmed9GOBP_Retrograde_Vesicle_Mediated_Transport_Golgi_To_Endoplasmic_ReticulumMouseBrainHP_ad_rep7 1.2e-09
Tmed9GOBP_Vesicle_LocalizationMouseBrainHP_ad_rep7 6.6e-08
Tmed9GOBP_Vesicle_TargetingMouseBrainHP_ad_rep7 2.1e-10
Tmed9GOBP_Vesicle_Targeting_To_From_Or_Within_GolgiMouseBrainHP_adpolb_rep1 4.7e-09
Tmed9GOBP_Endomembrane_System_OrganizationMouseBrainHP_polb_rep9 6.0e-11
Tmed9GOBP_Membrane_OrganizationMouseBrainHP_polb_rep9 1.4e-13
Tmed9GOBP_Organelle_LocalizationMouseBrainHP_polb_rep9 1.7e-09
Tmed9GOBP_Vesicle_Budding_From_MembraneMouseBrainHP_polb_rep9 1.3e-09
Tmed9GOBP_Vesicle_OrganizationMouseBrainHP_polb_rep9 4.1e-14

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Tmed9 function as liang/receptor in single cell data

TissueSourceSourceCellTargetTargetCellPMIDGroup

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Tmed9 function as liang/receptor across spatial transcriptomics tissue

check button Interactions using deconvoluted spatial data.

LigandReceptor LR pairTissueReplication

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Transcription factor for Tmed9 envolved

check buttonTranscription factor analysis using single cell data.
TFTissueGroupCell typesTarget genesRss score

check button Motif information.

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Related Drugs for Tmed9

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for Tmed9

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease namePubmedsSource