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Spatial pattern gene: Ccdc50 (spascer ID:67501) |
Gene summary for Ccdc50 |
 Gene summary |
| Gene information | |
| Species | Mouse | Gene symbol | Ccdc50 | Gene ID | 67501 |
| Gene name | coiled-coil domain containing 50 |
| Synonyms | C3orf6 |
| Cytomap | 16 B2|16 18.98 cM |
| Type of gene | protein-coding |
| Description | coiled-coil domain-containing protein 50protein Ymer |
| Modification date | 20220424 |
| UniProtAcc | Q810U5 |
| Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA). |
| Gene | GO ID | GO term | PubMed ID | Category |
| Ccdc50 | GO:0005737 | cytoplasm | 21873635 | Component |
| Ccdc50 | GO:0031625 | ubiquitin protein ligase binding | 21873635 | Function |
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Spatial pattern events for Ccdc50 |
| spatial pattern gene list. |
| Gene symbol | Species | Tissue | Replication | PMID | Adj p-value |
| Ccdc50 | Mouse | Embryo | rep_4 | 33188776 | 3.23e-08 |
| Ccdc50 | Mouse | Brain | rep_1 | 33469025 | 2.41e-13 |
| Ccdc50 | Mouse | Brain | rep_1 | 35027729 | 1.84e-06 |
| Ccdc50 | Mouse | Brain | rep_2 | 35027729 | 3.83e-08 |
| Ccdc50 | Mouse | Brain | rep_3 | 35027729 | 3.13e-14 |
| Ccdc50 | Mouse | Brain | rep_4 | 35027729 | 1.16e-10 |
| Ccdc50 | Mouse | Testicle | rep_1 | 34731600 | 1.63e-03 |
| Ccdc50 | Mouse | Lymph | PBS | 0 | 5.63e-08 |
| Ccdc50 | Mouse | Brain | rep_1 | 35210624 | 1.74e-15 |
| Ccdc50 | Mouse | Brain | rep_2 | 35210624 | 1.74e-15 |
| Ccdc50 | Mouse | Brain | rep_3 | 35210624 | 6.25e-15 |
| Ccdc50 | Mouse | Brain | rep_5 | 35210624 | 1.04e-13 |
| Ccdc50 | Mouse | Brain | rep_6 | 35210624 | 2.05e-15 |
| Ccdc50 | Mouse | Brain | rep_7 | 35210624 | 1.87e-15 |
| spatial pattern gene map.(click to enlarge the image in a new window) |
| H&E staining (if available) | Singel gene map |
Brain_rep_1_H&E  | |
Brain_rep_1_H&E  |  |
Brain_rep_2_H&E  |  |
Brain_rep_3_H&E  |  |
Brain_rep_4_H&E  |  |
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Spatial pattern pathway has Ccdc50 envolved |
| Symbol | Pathway | Species | Tissue type | Replication | P-value |
| Ccdc50 | GOBP_Nervous_System_Process | Mouse | Spinal cord | L7bCN02_E1 | 2.5e-06 |
| Ccdc50 | GOBP_Sensory_Perception | Mouse | Spinal cord | L7CN45_C1 | 5.0e-07 |
| Ccdc50 | GOBP_Sensory_Perception_Of_Mechanical_Stimulus | Mouse | Spinal cord | L7CN45_C1 | 2.4e-07 |
| Ccdc50 | GOBP_Nervous_System_Process | Mouse | Brain | rep_1 | 1.6e-36 |
| Ccdc50 | GOBP_Sensory_Perception | Mouse | Brain | rep_3 | 2.9e-57 |
| Ccdc50 | GOBP_Sensory_Perception_Of_Mechanical_Stimulus | Mouse | Brain | rep_3 | 1.7e-132 |
| Ccdc50 | GOBP_Sensory_Perception | Mouse | Embryo | rep_14 | 5.0e-07 |
| Ccdc50 | GOBP_Sensory_Perception_Of_Mechanical_Stimulus | Mouse | Embryo | rep_14 | 1.6e-53 |
| Ccdc50 | GOBP_Nervous_System_Process | Mouse | Embryo | rep_1 | 1.4e-08 |
| Ccdc50 | GOBP_Sensory_Perception | Mouse | Embryo | rep_3 | 0.0e+00 |
| Ccdc50 | GOBP_Sensory_Perception_Of_Mechanical_Stimulus | Mouse | Embryo | rep_3 | 8.3e-301 |
| Ccdc50 | GOBP_Nervous_System_Process | Mouse | Kidney | rep_2 | 1.9e-90 |
| Ccdc50 | GOBP_Sensory_Perception | Mouse | Kidney | rep_2 | 1.4e-94 |
| Ccdc50 | GOBP_Sensory_Perception_Of_Mechanical_Stimulus | Mouse | Kidney | rep_2 | 3.0e-69 |
| Ccdc50 | GOBP_Nervous_System_Process | Mouse | Liver | CN73-C1 | 1.7e-08 |
| Ccdc50 | GOBP_Nervous_System_Process | Mouse | Lymph | MS-1 | 1.4e-08 |
| Ccdc50 | GOBP_Sensory_Perception | Mouse | Lymph | MS-1 | 5.2e-11 |
| Ccdc50 | GOBP_Sensory_Perception_Of_Mechanical_Stimulus | Mouse | Lymph | MS-1 | 9.0e-11 |
| Ccdc50 | GOBP_Nervous_System_Process | Mouse | Brain | HP_ad_rep7 | 7.0e-10 |
| Ccdc50 | GOBP_Sensory_Perception | Mouse | Brain | HP_polb_rep9 | 1.2e-09 |
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Ccdc50 function as liang/receptor in single cell data |
| Tissue | Source | SourceCell | Target | TargetCell | PMID | Group |
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Ccdc50 function as liang/receptor across spatial transcriptomics tissue |
| Interactions using deconvoluted spatial data. |
| Ligand | Receptor | LR pair | Tissue | Replication |
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Transcription factor for Ccdc50 envolved |
| Transcription factor analysis using single cell data. |
| TF | Tissue | Group | Cell types | Target genes | Rss score |
| Motif information. |
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Related Drugs for Ccdc50 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.9 2022-01-04) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for Ccdc50 |
| Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | Pubmeds | Source |
| Ccdc50 | C3711374 | Nonsyndromic Deafness | 3 | CLINGEN |
| Ccdc50 | C1384666 | hearing impairment | 1 | GENOMICS_ENGLAND |
| Ccdc50 | C1843895 | Deafness, Autosomal Dominant 44 | 1 | CTD_human;GENOMICS_ENGLAND |
