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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

Spatial pattern genes

Soverview

Spatial pattern pathway

Soverview

Cell cell interactions using single cell data

Soverview

Cell-cell/spot-spot interactions using spatial data

Soverview

Transcription factors events

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Spatial pattern gene: Pantr1 (spascer ID:66297)

Gene summary for Pantr1

check button Gene summary
Gene information
SpeciesMouse
Gene symbol

Pantr1

Gene ID

66297

Gene namePOU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
Synonyms2610017I09Rik|Pou3f3os|linc-Brn1a
Cytomap1|1 B
Type of genencRNA
DescriptionPOU domain, class 3, transcription factor 3, opposite strand
Modification date20220514
UniProtAcc


check button Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).
GeneGO IDGO termPubMed IDCategory

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Spatial pattern events for Pantr1

check buttonspatial pattern gene list.
Gene symbolSpeciesTissueReplicationPMIDAdj p-value
Pantr1MouseBrainS1 344135152.07e-15
Pantr1MouseBrainS2 344135151.56e-15
Pantr1MouseBrainS3 344135151.64e-15
Pantr1MouseBrainS4 344135151.37e-15
Pantr1MouseBrainS6 344135151.46e-15
Pantr1MouseBrainS7 344135151.55e-15
Pantr1MouseEmbryo1E 342108877.50e-15
Pantr1MouseKidneyCLP 340037972.19e-15
Pantr1MouseKidneyIRI 340037972.29e-15
Pantr1MouseKidneySham 340037972.58e-15
Pantr1MouseKidneyrep_1 348531512.42e-15
Pantr1MouseKidneyrep_3 348531512.94e-15
Pantr1MouseKidneyrep_5 348531511.41e-07
Pantr1MouseKidneyrep_1 339761905.00e-12
Pantr1MouseKidneyrep_3 339761905.20e-11
Pantr1MouseBrainrep_1 334690251.30e-15
Pantr1MouseBrainrep_1 350277291.66e-15
Pantr1MouseBrainrep_2 350277291.57e-15
Pantr1MouseBrainrep_3 350277291.32e-15
Pantr1MouseBrainrep_4 350277291.76e-15
Pantr1MouseBrainrep_5 350277291.46e-15
Pantr1MouseBrainB02_D1 327023141.50e-14
Pantr1MouseBrainB02_E1 327023141.33e-14
Pantr1MouseBrainB03_C2 327023143.45e-14
Pantr1MouseBrainB03_D2 327023142.13e-14
Pantr1MouseBrainB05_D2 327023146.63e-09
Pantr1MouseBrainB07_C2 327023141.29e-11
Pantr1MouseBrainN02_C1 327023144.93e-14
Pantr1MouseBrainN02_D1 327023142.44e-14
Pantr1MouseBrainN03_C2 327023147.83e-11
Pantr1MouseBrainN03_D2 327023141.38e-14
Pantr1MouseBrainN04_D1 327023142.42e-07
Pantr1MouseBrainN04_E1 327023144.20e-13
Pantr1MouseBrainN05_D2 327023142.82e-13
Pantr1MouseBrainrep_1 352106241.74e-15
Pantr1MouseBrainrep_2 352106241.74e-15
Pantr1MouseBrainrep_3 352106241.82e-15
Pantr1MouseBrainrep_4 352106242.34e-15
Pantr1MouseBrainrep_5 352106242.07e-15
Pantr1MouseBrainrep_6 352106242.05e-15
Pantr1MouseBrainrep_7 352106241.87e-15

check buttonspatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)Singel gene map
Kidney_CLP_H&E
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Kidney_IRI_H&E
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Kidney_Sham_H&E
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Kidney_rep_1_H&E
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Kidney_rep_3_H&E
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Kidney_rep_5_H&E
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Kidney_rep_1_H&E
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Kidney_rep_3_H&E
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Brain_rep_1_H&E
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Brain_rep_1_H&E
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Brain_rep_2_H&E
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Brain_rep_3_H&E
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Brain_rep_4_H&E
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Brain_rep_5_H&E
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Brain_B02_D1_H&E
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Brain_B02_E1_H&E
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Brain_B03_C2_H&E
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Brain_B03_D2_H&E
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Brain_B05_D2_H&E
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Brain_B07_C2_H&E
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Brain_N02_C1_H&E
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Brain_N02_D1_H&E
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Brain_N03_C2_H&E
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Brain_N03_D2_H&E
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Brain_N04_D1_H&E
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Brain_N04_E1_H&E
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Brain_N05_D2_H&E
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Spatial pattern pathway has Pantr1 envolved


SymbolPathwaySpeciesTissue typeReplicationP-value

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Pantr1 function as liang/receptor in single cell data

TissueSourceSourceCellTargetTargetCellPMIDGroup

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Pantr1 function as liang/receptor across spatial transcriptomics tissue

check button Interactions using deconvoluted spatial data.

LigandReceptor LR pairTissueReplication

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Transcription factor for Pantr1 envolved

check buttonTranscription factor analysis using single cell data.
TFTissueGroupCell typesTarget genesRss score

check button Motif information.

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Related Drugs for Pantr1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for Pantr1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease namePubmedsSource