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Spatial pattern gene: Smim20 (spascer ID:66278) |
Gene summary for Smim20 |
 Gene summary |
| Gene information | |
| Species | Mouse | Gene symbol | Smim20 | Gene ID | 66278 |
| Gene name | small integral membrane protein 20 |
| Synonyms | 1110067B18Rik|1810013D10Rik|MITRAC7|N28078 |
| Cytomap | 5|5 C1 |
| Type of gene | protein-coding |
| Description | small integral membrane protein 20mitochondrial translation regulation assembly intermediate of cytochrome c oxidase protein of 7 kDa |
| Modification date | 20220424 |
| UniProtAcc | D3Z7Q2 |
| Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA). |
| Gene | GO ID | GO term | PubMed ID | Category |
| Smim20 | GO:0005743 | mitochondrial inner membrane | 21873635 | Component |
| Smim20 | GO:0033617 | mitochondrial cytochrome c oxidase assembly | 21873635 | Process |
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Spatial pattern events for Smim20 |
| spatial pattern gene list. |
| Gene symbol | Species | Tissue | Replication | PMID | Adj p-value |
| Smim20 | Mouse | Brain | S4 | 34413515 | 4.65e-15 |
| Smim20 | Mouse | Brain | S6 | 34413515 | 3.61e-12 |
| Smim20 | Mouse | Brain | rep_5 | 35141374 | 3.51e-14 |
| Smim20 | Mouse | Kidney | Sham | 34003797 | 1.27e-13 |
| Smim20 | Mouse | Brain | rep_1 | 33469025 | 5.50e-11 |
| Smim20 | Mouse | Brain | rep_1 | 35027729 | 1.88e-10 |
| Smim20 | Mouse | Brain | rep_2 | 35027729 | 6.82e-14 |
| Smim20 | Mouse | Brain | rep_3 | 35027729 | 3.13e-14 |
| Smim20 | Mouse | Brain | rep_4 | 35027729 | 4.73e-11 |
| Smim20 | Mouse | Brain | rep_5 | 35027729 | 2.62e-15 |
| Smim20 | Mouse | Intestine | rep_4 | 35149721 | 2.30e-15 |
| Smim20 | Mouse | Testicle | rep_4 | 34731600 | 1.75e-14 |
| Smim20 | Mouse | Brain | rep_2 | 35210624 | 1.82e-06 |
| Smim20 | Mouse | Brain | rep_3 | 35210624 | 1.12e-10 |
| spatial pattern gene map.(click to enlarge the image in a new window) |
| H&E staining (if available) | Singel gene map |
Brain_rep_5_H&E  |  |
Kidney_Sham_H&E  |  |
Brain_rep_1_H&E  | |
Brain_rep_1_H&E  |  |
Brain_rep_2_H&E  |  |
Brain_rep_3_H&E  |  |
Brain_rep_4_H&E  |  |
Brain_rep_5_H&E  |  |
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Spatial pattern pathway has Smim20 envolved |
| Symbol | Pathway | Species | Tissue type | Replication | P-value |
| Smim20 | GOBP_Mitochondrial_Cytochrome_C_Oxidase_Assembly | Mouse | Spinal cord | L7bCN02_E1 | 3.1e-07 |
| Smim20 | GOBP_Respiratory_Chain_Complex_Iv_Assembly | Mouse | Spinal cord | L7bCN02_E1 | 3.3e-06 |
| Smim20 | GOBP_Mitochondrion_Organization | Mouse | Spinal cord | L7CN45_C1 | 3.6e-07 |
| Smim20 | GOBP_Mitochondrial_Respiratory_Chain_Complex_Assembly | Mouse | Spinal cord | L7CN47_D1 | 3.7e-06 |
| Smim20 | GOBP_Cytochrome_Complex_Assembly | Mouse | Spinal cord | L7CN97_E2 | 9.6e-06 |
| Smim20 | GOBP_Respiratory_Chain_Complex_Iv_Assembly | Mouse | Brain | rep_41 | 1.3e-05 |
| Smim20 | GOBP_Mitochondrial_Respiratory_Chain_Complex_Assembly | Mouse | Brain | rep_71 | 2.8e-06 |
| Smim20 | GOBP_Cytochrome_Complex_Assembly | Mouse | Brain | rep_1 | 2.6e-09 |
| Smim20 | GOBP_Mitochondrial_Respiratory_Chain_Complex_Assembly | Mouse | Brain | rep_1 | 5.0e-26 |
| Smim20 | GOBP_Mitochondrial_Cytochrome_C_Oxidase_Assembly | Mouse | Brain | rep_3 | 5.3e-150 |
| Smim20 | GOBP_Mitochondrion_Organization | Mouse | Brain | rep_3 | 1.3e-89 |
| Smim20 | GOBP_Respiratory_Chain_Complex_Iv_Assembly | Mouse | Brain | rep_5 | 2.2e-60 |
| Smim20 | GOBP_Cytochrome_Complex_Assembly | Mouse | Embryo | rep_6 | 1.7e-26 |
| Smim20 | GOBP_Mitochondrial_Cytochrome_C_Oxidase_Assembly | Mouse | Embryo | rep_14 | 1.7e-51 |
| Smim20 | GOBP_Mitochondrial_Respiratory_Chain_Complex_Assembly | Mouse | Embryo | rep_14 | 5.0e-27 |
| Smim20 | GOBP_Mitochondrion_Organization | Mouse | Embryo | rep_14 | 1.8e-11 |
| Smim20 | GOBP_Respiratory_Chain_Complex_Iv_Assembly | Mouse | Embryo | rep_14 | 1.5e-64 |
| Smim20 | GOBP_Mitochondrion_Organization | Mouse | Embryo | rep_3 | 4.0e-48 |
| Smim20 | GOBP_Mitochondrial_Cytochrome_C_Oxidase_Assembly | Mouse | Kidney | rep_2 | 2.6e-64 |
| Smim20 | GOBP_Mitochondrion_Organization | Mouse | Kidney | rep_2 | 1.7e-21 |
| Smim20 | GOBP_Mitochondrial_Cytochrome_C_Oxidase_Assembly | Mouse | Liver | CN16-D2 | 2.7e-07 |
| Smim20 | GOBP_Cytochrome_Complex_Assembly | Mouse | Liver | rep_15 | 4.6e-19 |
| Smim20 | GOBP_Respiratory_Chain_Complex_Iv_Assembly | Mouse | Liver | rep_15 | 6.4e-19 |
| Smim20 | GOBP_Mitochondrial_Respiratory_Chain_Complex_Assembly | Mouse | Liver | rep_16 | 4.3e-23 |
| Smim20 | GOBP_Cytochrome_Complex_Assembly | Mouse | Intestine | rep_2 | 1.6e-63 |
| Smim20 | GOBP_Respiratory_Chain_Complex_Iv_Assembly | Mouse | Intestine | rep_2 | 2.4e-58 |
| Smim20 | GOBP_Mitochondrial_Cytochrome_C_Oxidase_Assembly | Mouse | Lymph | MS-1 | 8.9e-11 |
| Smim20 | GOBP_Mitochondrion_Organization | Mouse | Lymph | MS-1 | 4.2e-09 |
| Smim20 | GOBP_Cytochrome_Complex_Assembly | Mouse | Lymph | MS-2 | 1.6e-13 |
| Smim20 | GOBP_Respiratory_Chain_Complex_Iv_Assembly | Mouse | Lymph | MS-2 | 1.2e-13 |
| Smim20 | GOBP_Cytochrome_Complex_Assembly | Mouse | Brain | HP_adpolb_rep1 | 2.0e-07 |
| Smim20 | GOBP_Mitochondrial_Cytochrome_C_Oxidase_Assembly | Mouse | Brain | HP_adpolb_rep1 | 2.8e-11 |
| Smim20 | GOBP_Respiratory_Chain_Complex_Iv_Assembly | Mouse | Brain | HP_adpolb_rep1 | 3.9e-08 |
| Smim20 | GOBP_Mitochondrial_Respiratory_Chain_Complex_Assembly | Mouse | Brain | HP_polb_rep9 | 7.2e-14 |
| Smim20 | GOBP_Mitochondrion_Organization | Mouse | Brain | HP_polb_rep9 | 1.2e-11 |
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Smim20 function as liang/receptor in single cell data |
| Tissue | Source | SourceCell | Target | TargetCell | PMID | Group |
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Smim20 function as liang/receptor across spatial transcriptomics tissue |
| Interactions using deconvoluted spatial data. |
| Ligand | Receptor | LR pair | Tissue | Replication |
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Transcription factor for Smim20 envolved |
| Transcription factor analysis using single cell data. |
| TF | Tissue | Group | Cell types | Target genes | Rss score |
| Motif information. |
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Related Drugs for Smim20 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.9 2022-01-04) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for Smim20 |
| Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | Pubmeds | Source |
