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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

Spatial pattern genes

Soverview

Spatial pattern pathway

Soverview

Cell cell interactions using single cell data

Soverview

Cell-cell/spot-spot interactions using spatial data

Soverview

Transcription factors events

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Spatial pattern gene: Ska2 (spascer ID:66140)

Gene summary for Ska2

check button Gene summary
Gene information
SpeciesMouse
Gene symbol

Ska2

Gene ID

66140

Gene namespindle and kinetochore associated complex subunit 2
Synonyms1110001A07Rik|C78640|Fam33a
Cytomap11|11 C
Type of geneprotein-coding
Descriptionspindle and kinetochore-associated protein 2family with sequence similarity 33, member A
Modification date20220424
UniProtAcc

Q9CR46


check button Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).
GeneGO IDGO termPubMed IDCategory
Ska2

GO:0000278

mitotic cell cycle

21873635

Process
Ska2

GO:0000940

outer kinetochore

21873635

Component
Ska2

GO:0005876

spindle microtubule

21873635

Component
Ska2

GO:0007059

chromosome segregation

21873635

Process
Ska2

GO:0008017

microtubule binding

21873635

Function

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Spatial pattern events for Ska2

check buttonspatial pattern gene list.
Gene symbolSpeciesTissueReplicationPMIDAdj p-value
Ska2MouseKidneyCLP 340037974.96e-12
Ska2MouseBrainrep_1 334690255.56e-12
Ska2MouseTesticlerep_4 347316001.99e-11
Ska2MouseLymphA1 01.70e-07
Ska2MouseLymphB1 06.08e-15

check buttonspatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)Singel gene map
Kidney_CLP_H&E
boxplot

boxplot
Brain_rep_1_H&E
boxplot


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Spatial pattern pathway has Ska2 envolved


SymbolPathwaySpeciesTissue typeReplicationP-value
Ska2GOBP_Cell_CycleMouseSpinal cordCN94_E1 1.1e-06
Ska2GOBP_Microtubule_Based_ProcessMouseSpinal cordCN94_E1 2.4e-06
Ska2GOBP_Cytoskeleton_OrganizationMouseSpinal cordL7bCN02_E1 8.3e-06
Ska2GOBP_Cell_DivisionMouseSpinal cordL7CN45_C1 2.6e-06
Ska2GOBP_Chromosome_SegregationMouseSpinal cordL7CN45_C1 1.1e-06
Ska2GOBP_Mitotic_Cell_CycleMouseSpinal cordL7CN45_C1 2.4e-08
Ska2GOBP_Regulation_Of_Microtubule_Based_ProcessMouseSpinal cordL7CN45_C1 1.5e-07
Ska2GOBP_Regulation_Of_Microtubule_Cytoskeleton_OrganizationMouseSpinal cordL7CN45_C1 8.1e-06
Ska2GOBP_Cell_CycleMouseBrainrep_27 8.4e-07
Ska2GOBP_Cell_DivisionMouseBrainrep_27 3.6e-05
Ska2GOBP_Mitotic_Cell_CycleMouseBrainrep_27 1.1e-05
Ska2GOBP_Cell_CycleMouseBrainrep_1 7.0e-10
Ska2GOBP_Cell_DivisionMouseBrainrep_1 9.7e-23
Ska2GOBP_Chromosome_SegregationMouseBrainrep_1 6.3e-08
Ska2GOBP_Cytoskeleton_OrganizationMouseBrainrep_1 1.1e-11
Ska2GOBP_Microtubule_Based_ProcessMouseBrainrep_1 1.6e-07
Ska2GOBP_Microtubule_Polymerization_Or_DepolymerizationMouseBrainrep_1 6.8e-20
Ska2GOBP_Mitotic_Cell_CycleMouseBrainrep_1 1.5e-25
Ska2GOBP_Regulation_Of_Cytoskeleton_OrganizationMouseBrainrep_1 1.1e-40
Ska2GOBP_Regulation_Of_Microtubule_Based_ProcessMouseBrainrep_1 2.0e-17
Ska2GOBP_Regulation_Of_Microtubule_Cytoskeleton_OrganizationMouseBrainrep_1 4.8e-24
Ska2GOBP_Regulation_Of_Microtubule_Polymerization_Or_DepolymerizationMouseBrainrep_1 7.9e-26
Ska2GOBP_Regulation_Of_Organelle_OrganizationMouseBrainrep_1 7.9e-20
Ska2GOBP_Microtubule_Cytoskeleton_OrganizationMouseBrainrep_38.5e-140
Ska2GOBP_Cell_DivisionMouseEmbryorep_1 0.0e+00
Ska2GOBP_Regulation_Of_Cytoskeleton_OrganizationMouseEmbryorep_1 2.6e-63
Ska2GOBP_Regulation_Of_Organelle_OrganizationMouseEmbryorep_3 1.3e-27
Ska2GOBP_Regulation_Of_Microtubule_Based_ProcessMouseEmbryorep_54.2e-125
Ska2GOBP_Regulation_Of_Microtubule_Cytoskeleton_OrganizationMouseEmbryorep_54.2e-125
Ska2GOBP_Cell_CycleMouseKidneyrep_2 1.0e-24
Ska2GOBP_Cell_DivisionMouseKidneyrep_2 5.3e-77
Ska2GOBP_Chromosome_SegregationMouseKidneyrep_2 8.3e-67
Ska2GOBP_Cytoskeleton_OrganizationMouseKidneyrep_2 1.5e-44
Ska2GOBP_Mitotic_Cell_CycleMouseKidneyrep_2 1.1e-15
Ska2GOBP_Regulation_Of_Cytoskeleton_OrganizationMouseKidneyrep_2 1.8e-22
Ska2GOBP_Regulation_Of_Organelle_OrganizationMouseKidneyrep_2 6.7e-77
Ska2GOBP_Microtubule_Based_ProcessMouseLiverCN16-D2 1.8e-11
Ska2GOBP_Microtubule_Cytoskeleton_OrganizationMouseLiverCN16-D2 2.8e-10
Ska2GOBP_Microtubule_Polymerization_Or_DepolymerizationMouseLiverCN65-C1 6.4e-09
Ska2GOBP_Microtubule_Polymerization_Or_DepolymerizationMouseLiverrep_16 7.4e-11
Ska2GOBP_Regulation_Of_Microtubule_Polymerization_Or_DepolymerizationMouseLiverrep_16 7.8e-13
Ska2GOBP_Cell_CycleMouseLymphMS-1 1.3e-07
Ska2GOBP_Cytoskeleton_OrganizationMouseLymphMS-1 1.8e-13
Ska2GOBP_Microtubule_Based_ProcessMouseLymphMS-1 1.5e-08
Ska2GOBP_Microtubule_Cytoskeleton_OrganizationMouseLymphMS-1 7.6e-07
Ska2GOBP_Regulation_Of_Cytoskeleton_OrganizationMouseLymphMS-1 8.4e-09
Ska2GOBP_Regulation_Of_Organelle_OrganizationMouseLymphMS-1 1.4e-10
Ska2GOBP_Regulation_Of_Microtubule_Based_ProcessMouseBrainrep_4 2.3e-16
Ska2GOBP_Regulation_Of_Microtubule_Cytoskeleton_OrganizationMouseBrainrep_4 2.6e-09
Ska2GOBP_Regulation_Of_Microtubule_Polymerization_Or_DepolymerizationMouseBrainrep_4 3.0e-27
Ska2GOBP_Cell_CycleMouseBrainHP_ad_rep7 6.6e-08
Ska2GOBP_Cell_DivisionMouseBrainHP_ad_rep7 2.6e-09
Ska2GOBP_Chromosome_SegregationMouseBrainHP_ad_rep7 4.9e-08
Ska2GOBP_Cytoskeleton_OrganizationMouseBrainHP_ad_rep7 5.3e-08
Ska2GOBP_Microtubule_Based_ProcessMouseBrainHP_ad_rep7 2.8e-10
Ska2GOBP_Microtubule_Cytoskeleton_OrganizationMouseBrainHP_ad_rep7 3.8e-13
Ska2GOBP_Microtubule_Polymerization_Or_DepolymerizationMouseBrainHP_ad_rep7 7.6e-16
Ska2GOBP_Regulation_Of_Microtubule_Based_ProcessMouseBrainHP_ad_rep7 3.2e-13
Ska2GOBP_Regulation_Of_Microtubule_Cytoskeleton_OrganizationMouseBrainHP_ad_rep7 8.7e-15
Ska2GOBP_Regulation_Of_Microtubule_Polymerization_Or_DepolymerizationMouseBrainHP_ad_rep7 5.7e-18
Ska2GOBP_Regulation_Of_Organelle_OrganizationMouseBrainHP_ad_rep7 8.1e-07
Ska2GOBP_Mitotic_Cell_CycleMouseBrainHP_polb_rep9 1.6e-10
Ska2GOBP_Regulation_Of_Cytoskeleton_OrganizationMouseBrainHP_polb_rep9 1.1e-07

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Ska2 function as liang/receptor in single cell data

TissueSourceSourceCellTargetTargetCellPMIDGroup

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Ska2 function as liang/receptor across spatial transcriptomics tissue

check button Interactions using deconvoluted spatial data.

LigandReceptor LR pairTissueReplication

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Transcription factor for Ska2 envolved

check buttonTranscription factor analysis using single cell data.
TFTissueGroupCell typesTarget genesRss score

check button Motif information.

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Related Drugs for Ska2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for Ska2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease namePubmedsSource