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	Gene summary
	Spatial pattern genes
	Spatial pattern pathway
	Cell cell interactions using single cell data
	Cell-cell/spot-spot interactions using spatial data
	Transcription factors events
	Related drugs with this gene
	Related diseases with this gene

Spatial pattern gene: Rbms1 (spascer ID:56878)

Gene summary for Rbms1

Gene summary

Gene information
	Species	Mouse
	Gene symbol	Rbms1
	Gene ID	56878
	Gene name	RNA binding motif, single stranded interacting protein 1
	Synonyms	2600014B10Rik\|AI255215\|MSSP-1\|MSSP-2\|MSSP-3\|YC1
	Cytomap	2\|2 C1.2
	Type of gene	protein-coding
	Description	RNA-binding motif, single-stranded-interacting protein 1single-stranded DNA-binding protein MSSP-1
	Modification date	20220424
	UniProtAcc	Q91W59

Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).

Gene	GO ID	GO term	PubMed ID	Category
Rbms1	GO:0003723	RNA binding	21873635	Function
Rbms1	GO:0003730	mRNA 3'-UTR binding	21873635	Function
Rbms1	GO:0005634	nucleus	21873635	Component
Rbms1	GO:0005829	cytosol	21873635	Component
Rbms1	GO:0008143	poly(A) binding	21873635	Function
Rbms1	GO:0008266	poly(U) RNA binding	21873635	Function
Rbms1	GO:1990904	ribonucleoprotein complex	21873635	Component

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Spatial pattern events for Rbms1

spatial pattern gene list.

Gene symbol	Species	Tissue	Replication	PMID	Adj p-value
Rbms1	Mouse	Brain	S1	34413515	3.94e-09
Rbms1	Mouse	Brain	S2	34413515	1.61e-08
Rbms1	Mouse	Brain	S4	34413515	3.07e-09
Rbms1	Mouse	Brain	S6	34413515	1.46e-15
Rbms1	Mouse	Brain	S7	34413515	4.91e-06
Rbms1	Mouse	Brain	22A	32637622	3.70e-07
Rbms1	Mouse	Brain	rep_1	35141374	1.15e-06
Rbms1	Mouse	Brain	rep_2	35141374	4.10e-08
Rbms1	Mouse	Brain	rep_4	35141374	2.22e-09
Rbms1	Mouse	Brain	rep_5	35141374	1.47e-15
Rbms1	Mouse	Brain	rep_6	35141374	5.78e-14
Rbms1	Mouse	Embryo	1E	34210887	1.97e-07
Rbms1	Mouse	Embryo	3G	34210887	9.16e-07
Rbms1	Mouse	Embryo	4C	34210887	6.49e-06
Rbms1	Mouse	Embryo	4E	34210887	3.33e-12
Rbms1	Mouse	Embryo	rep_1	33188776	2.23e-11
Rbms1	Mouse	Embryo	rep_2	33188776	1.37e-14
Rbms1	Mouse	Embryo	rep_3	33188776	1.13e-14
Rbms1	Mouse	Embryo	rep_4	33188776	5.87e-10
Rbms1	Mouse	Embryo	rep_5	33188776	1.40e-14
Rbms1	Mouse	Embryo	rep_7	33188776	6.94e-15
Rbms1	Mouse	Embryo	rep_12	33188776	2.06e-08
Rbms1	Mouse	Embryo	rep_13	33188776	4.49e-15
Rbms1	Mouse	Kidney	CLP	34003797	6.92e-15
Rbms1	Mouse	Kidney	IRI	34003797	2.29e-15
Rbms1	Mouse	Kidney	Sham	34003797	3.39e-07
Rbms1	Mouse	Kidney	rep_2	34853151	3.38e-15
Rbms1	Mouse	Kidney	rep_4	34853151	6.82e-15
Rbms1	Mouse	Kidney	rep_5	34853151	1.24e-10
Rbms1	Mouse	Brain	rep_1	33469025	1.30e-15
Rbms1	Mouse	Brain	rep_1	35027729	1.66e-15
Rbms1	Mouse	Brain	rep_2	35027729	1.57e-15
Rbms1	Mouse	Brain	rep_3	35027729	2.38e-15
Rbms1	Mouse	Brain	rep_4	35027729	5.45e-10
Rbms1	Mouse	Brain	rep_5	35027729	2.62e-15
Rbms1	Mouse	Intestine	rep_2	35149721	3.44e-15
Rbms1	Mouse	Intestine	rep_3	35149721	3.25e-15
Rbms1	Mouse	Intestine	rep_4	35149721	2.30e-15
Rbms1	Mouse	Lymph	B1	0	5.76e-07
Rbms1	Mouse	Lung	rep_1	35290801	4.52e-15
Rbms1	Mouse	Lung	rep_2	35290801	8.33e-12
Rbms1	Mouse	Lung	rep_3	35290801	2.33e-10
Rbms1	Mouse	Lung	rep_4	35290801	1.00e-12
Rbms1	Mouse	Brain	rep_6	35210624	2.05e-15
Rbms1	Mouse	Brain	rep_7	35210624	6.25e-15
Rbms1	Mouse	Brain	OFB_ad_rep2	33083725	1.34e-02
Rbms1	Mouse	Brain	OFB_ad_rep3	33083725	1.78e-02
Rbms1	Mouse	Brain	OFB_adpolb_rep2	33083725	2.02e-03
Rbms1	Mouse	Brain	OFB_adpolb_rep3	33083725	2.18e-04
Rbms1	Mouse	Brain	OFB_polb_rep7	33083725	9.49e-05
Rbms1	Mouse	Brain	OFB_wt_rep5	33083725	6.84e-03

spatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)	Singel gene map
Brain_rep_1_H&E
Brain_rep_2_H&E
Brain_rep_4_H&E
Brain_rep_5_H&E
Brain_rep_6_H&E
Kidney_CLP_H&E
Kidney_IRI_H&E
Kidney_Sham_H&E
Kidney_rep_2_H&E
Kidney_rep_4_H&E
Kidney_rep_5_H&E
Brain_rep_1_H&E
Brain_rep_1_H&E
Brain_rep_2_H&E
Brain_rep_3_H&E
Brain_rep_4_H&E
Brain_rep_5_H&E
Lung_rep_1_H&E
Lung_rep_2_H&E
Lung_rep_3_H&E
Lung_rep_4_H&E
Brain_OFB_ad_rep2_H&E
Brain_OFB_ad_rep3_H&E
Brain_OFB_adpolb_rep2_H&E
Brain_OFB_adpolb_rep3_H&E
Brain_OFB_polb_rep7_H&E
Brain_OFB_wt_rep5_H&E

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Spatial pattern pathway has Rbms1 envolved

Symbol	Pathway	Species	Tissue type	Replication	P-value
Rbms1	GOBP_Dna_Replication	Mouse	Spinal cord	L7CN45_C1	2.8e-07
Rbms1	GOBP_Rna_Processing	Mouse	Spinal cord	L7CN45_C1	2.2e-09
Rbms1	GOBP_Dna_Replication	Mouse	Brain	rep_27	6.4e-06
Rbms1	GOBP_Dna_Replication	Mouse	Brain	rep_1	4.3e-10
Rbms1	GOBP_Rna_Processing	Mouse	Brain	rep_3	4.3e-140
Rbms1	GOBP_Rna_Processing	Mouse	Embryo	rep_14	3.5e-14
Rbms1	GOBP_Rna_Processing	Mouse	Embryo	rep_2	2.4e-14
Rbms1	GOBP_Dna_Replication	Mouse	Kidney	rep_2	5.9e-43
Rbms1	GOBP_Rna_Processing	Mouse	Kidney	rep_2	1.1e-71
Rbms1	GOBP_Rna_Processing	Mouse	Lymph	MS-1	2.0e-09
Rbms1	GOBP_Dna_Replication	Mouse	Brain	HP_ad_rep7	1.1e-10
Rbms1	GOBP_Rna_Processing	Mouse	Brain	HP_ad_rep7	2.7e-09

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Rbms1 function as liang/receptor in single cell data

Tissue

Source

SourceCell

Target

TargetCell

PMID

Group

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Rbms1 function as liang/receptor across spatial transcriptomics tissue

Interactions using deconvoluted spatial data.

Ligand

Receptor

LR pair

Tissue

Replication

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Transcription factor for Rbms1 envolved

Transcription factor analysis using single cell data.

Tissue

Group

Cell types

Target genes

Rss score

Motif information.

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Related Drugs for Rbms1

Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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Related Diseases for Rbms1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

Pubmeds

Source