Home

Download & Upload

Statistics

Landscape

Help

Contact

	Gene summary
	Spatial pattern genes
	Spatial pattern pathway
	Cell cell interactions using single cell data
	Cell-cell/spot-spot interactions using spatial data
	Transcription factors events
	Related drugs with this gene
	Related diseases with this gene

Spatial pattern gene: Bdp1 (spascer ID:544971)

Gene summary for Bdp1

Gene summary

Gene information
	Species	Mouse
	Gene symbol	Bdp1
	Gene ID	544971
	Gene name	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
	Synonyms	AI662220\|AW049390\|AW456745\|B130055N23Rik\|G630013P12Rik\|TAF3B1\|TFC5\|TFIIIB150\|TFIIIB90\|Tfnr\|mKIAA1241
	Cytomap	13 D1\|13 52.92 cM
	Type of gene	protein-coding
	Description	transcription factor TFIIIB component B'' homologtranscription factor IIIB 150transcription factor-like nuclear regulator
	Modification date	20220424
	UniProtAcc	Q571C7

Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).

Gene	GO ID	GO term	PubMed ID	Category
Bdp1	GO:0000126	transcription factor TFIIIB complex	21873635	Component
Bdp1	GO:0001156	TFIIIC-class transcription factor complex binding	21873635	Function
Bdp1	GO:0070898	RNA polymerase III preinitiation complex assembly	21873635	Process

Top

Spatial pattern events for Bdp1

spatial pattern gene list.

Gene symbol	Species	Tissue	Replication	PMID	Adj p-value
Bdp1	Mouse	Embryo	rep_3	33188776	4.09e-09
Bdp1	Mouse	Brain	rep_7	35210624	3.24e-07

spatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)

Singel gene map

Top

Spatial pattern pathway has Bdp1 envolved

Symbol	Pathway	Species	Tissue type	Replication	P-value
Bdp1	GOBP_Transcription_Initiation_From_Rna_Polymerase_Iii_Promoter	Mouse	Spinal cord	CN93_E1	1.6e-06
Bdp1	GOBP_Protein_Dna_Complex_Subunit_Organization	Mouse	Spinal cord	L7bCN02_E1	3.4e-06
Bdp1	GOBP_Dna_Templated_Transcription_Initiation	Mouse	Spinal cord	L7CN45_C1	1.5e-08
Bdp1	GOBP_Transcription_By_Rna_Polymerase_Iii	Mouse	Spinal cord	L7CN45_C1	2.3e-08
Bdp1	GOBP_Transcription_Preinitiation_Complex_Assembly	Mouse	Spinal cord	L7CN45_C1	2.2e-07
Bdp1	GOBP_Dna_Templated_Transcription_Initiation	Mouse	Brain	rep_27	1.0e-06
Bdp1	GOBP_Transcription_Initiation_From_Rna_Polymerase_Iii_Promoter	Mouse	Brain	rep_37	3.0e-05
Bdp1	GOBP_Dna_Templated_Transcription_Initiation	Mouse	Brain	rep_1	2.3e-11
Bdp1	GOBP_Transcription_Initiation_From_Rna_Polymerase_Iii_Promoter	Mouse	Brain	rep_1	6.1e-14
Bdp1	GOBP_Transcription_Preinitiation_Complex_Assembly	Mouse	Brain	rep_1	3.2e-26
Bdp1	GOBP_Protein_Dna_Complex_Subunit_Organization	Mouse	Brain	rep_3	5.3e-122
Bdp1	GOBP_Transcription_By_Rna_Polymerase_Iii	Mouse	Brain	rep_3	6.9e-134
Bdp1	GOBP_Transcription_Initiation_From_Rna_Polymerase_Iii_Promoter	Mouse	Embryo	rep_6	6.4e-21
Bdp1	GOBP_Dna_Templated_Transcription_Initiation	Mouse	Embryo	rep_14	3.3e-18
Bdp1	GOBP_Protein_Dna_Complex_Subunit_Organization	Mouse	Embryo	rep_14	2.2e-11
Bdp1	GOBP_Transcription_By_Rna_Polymerase_Iii	Mouse	Embryo	rep_14	5.4e-08
Bdp1	GOBP_Transcription_Preinitiation_Complex_Assembly	Mouse	Embryo	rep_14	4.7e-53
Bdp1	GOBP_Dna_Templated_Transcription_Initiation	Mouse	Kidney	rep_2	6.1e-40
Bdp1	GOBP_Protein_Dna_Complex_Subunit_Organization	Mouse	Kidney	rep_2	1.1e-35
Bdp1	GOBP_Transcription_By_Rna_Polymerase_Iii	Mouse	Kidney	rep_2	6.0e-09
Bdp1	GOBP_Transcription_Initiation_From_Rna_Polymerase_Iii_Promoter	Mouse	Kidney	rep_2	2.7e-48
Bdp1	GOBP_Transcription_Preinitiation_Complex_Assembly	Mouse	Kidney	rep_2	5.4e-51
Bdp1	GOBP_Transcription_Initiation_From_Rna_Polymerase_Iii_Promoter	Mouse	Liver	CN16-D1	3.6e-12
Bdp1	GOBP_Transcription_Initiation_From_Rna_Polymerase_Iii_Promoter	Mouse	Liver	rep_16	3.3e-09
Bdp1	GOBP_Transcription_Initiation_From_Rna_Polymerase_Iii_Promoter	Mouse	Brain	rep_1	2.9e-06
Bdp1	GOBP_Dna_Templated_Transcription_Initiation	Mouse	Lymph	MS-1	3.5e-13
Bdp1	GOBP_Protein_Dna_Complex_Subunit_Organization	Mouse	Lymph	MS-1	2.3e-09
Bdp1	GOBP_Transcription_Preinitiation_Complex_Assembly	Mouse	Lymph	MS-2	3.1e-08
Bdp1	GOBP_Dna_Templated_Transcription_Initiation	Mouse	Brain	rep_7	7.7e-09
Bdp1	GOBP_Transcription_Initiation_From_Rna_Polymerase_Iii_Promoter	Mouse	Brain	HP_ad_rep3	3.2e-09
Bdp1	GOBP_Protein_Dna_Complex_Subunit_Organization	Mouse	Brain	HP_ad_rep7	9.8e-13
Bdp1	GOBP_Transcription_By_Rna_Polymerase_Iii	Mouse	Brain	HP_ad_rep7	2.1e-11
Bdp1	GOBP_Transcription_Preinitiation_Complex_Assembly	Mouse	Brain	HP_ad_rep7	4.8e-11
Bdp1	GOBP_Dna_Templated_Transcription_Initiation	Mouse	Brain	HP_polb_rep9	8.2e-07

Top

Bdp1 function as liang/receptor in single cell data

Tissue

Source

SourceCell

Target

TargetCell

PMID

Group

Top

Bdp1 function as liang/receptor across spatial transcriptomics tissue

Interactions using deconvoluted spatial data.

Ligand

Receptor

LR pair

Tissue

Replication

Top

Transcription factor for Bdp1 envolved

Transcription factor analysis using single cell data.

TF	Tissue	Group	Cell types	Target genes	Rss score
BDP1	Uterus	early	Glandular	XRN1,SACM1L,ATF7IP, etc.	0.323
BDP1	Uterus	early	SOX9_LGR5	XRN1,SACM1L,ATF7IP, etc.	0.349
BDP1	Uterus	early	SOX9	XRN1,SACM1L,ATF7IP, etc.	0.409
BDP1	Uterus	mid	Glandular_secretory	KANSL1,UPF2,BRPF3, etc.	0.779
BDP1	Uterus	mid	Glandular	KANSL1,UPF2,BRPF3, etc.	0.264
BDP1	Uterus	late	Glandular_secretory	USP34,CHD8,PDS5A, etc.	0.741
BDP1	Uterus	late	Ciliated	USP34,CHD8,PDS5A, etc.	0.291

Motif information.

Top

Related Drugs for Bdp1

Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

Related Diseases for Bdp1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	Pubmeds	Source
Bdp1	C3711374	Nonsyndromic Deafness	1	CLINGEN