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Spatial pattern gene: Abi3bp (spascer ID:320712) |
Gene summary for Abi3bp |
 Gene summary |
| Gene information | |
| Species | Mouse | Gene symbol | Abi3bp | Gene ID | 320712 |
| Gene name | ABI family member 3 binding protein |
| Synonyms | 5033411B22Rik|AI506287|BG172926|D930038M13Rik|TARSH|eratin |
| Cytomap | 16|16 C1.1 |
| Type of gene | protein-coding |
| Description | target of Nesh-SH3ABI gene family, member 3 (NESH) binding protein |
| Modification date | 20220424 |
| UniProtAcc |
|
| Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA). |
| Gene | GO ID | GO term | PubMed ID | Category |
| Abi3bp | GO:0010811 | positive regulation of cell-substrate adhesion | 21873635 | Process |
| Abi3bp | GO:0030198 | extracellular matrix organization | 21873635 | Process |
| Abi3bp | GO:0062023 | collagen-containing extracellular matrix | 21873635 | Component |
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Spatial pattern events for Abi3bp |
| spatial pattern gene list. |
| Gene symbol | Species | Tissue | Replication | PMID | Adj p-value |
| Abi3bp | Mouse | Brain | 01A | 32637622 | 7.83e-13 |
| Abi3bp | Mouse | Brain | 01B | 32637622 | 9.29e-14 |
| Abi3bp | Mouse | Brain | 02A | 32637622 | 1.97e-13 |
| Abi3bp | Mouse | Brain | 02B | 32637622 | 4.36e-13 |
| Abi3bp | Mouse | Brain | 03A | 32637622 | 1.68e-13 |
| Abi3bp | Mouse | Brain | 03B | 32637622 | 1.53e-07 |
| Abi3bp | Mouse | Brain | 04A | 32637622 | 1.71e-06 |
| Abi3bp | Mouse | Brain | 04B | 32637622 | 7.46e-10 |
| Abi3bp | Mouse | Embryo | 2G | 34210887 | 2.07e-07 |
| Abi3bp | Mouse | Embryo | 3G | 34210887 | 1.25e-09 |
| Abi3bp | Mouse | Embryo | 4C | 34210887 | 2.08e-08 |
| Abi3bp | Mouse | Kidney | CLP | 34003797 | 3.11e-10 |
| Abi3bp | Mouse | Kidney | IRI | 34003797 | 1.09e-11 |
| Abi3bp | Mouse | Kidney | Sham | 34003797 | 1.12e-06 |
| Abi3bp | Mouse | Kidney | rep_1 | 34853151 | 2.42e-15 |
| Abi3bp | Mouse | Kidney | rep_5 | 34853151 | 1.02e-14 |
| Abi3bp | Mouse | Brain | rep_1 | 33469025 | 1.30e-15 |
| Abi3bp | Mouse | Intestine | rep_1 | 35149721 | 6.08e-15 |
| Abi3bp | Mouse | Intestine | rep_2 | 35149721 | 1.03e-11 |
| Abi3bp | Mouse | Brain | N03_D2 | 32702314 | 1.41e-07 |
| Abi3bp | Mouse | Lymph | B1 | 0 | 3.66e-15 |
| Abi3bp | Mouse | Lung | rep_1 | 35290801 | 4.52e-15 |
| Abi3bp | Mouse | Lung | rep_2 | 35290801 | 2.27e-13 |
| Abi3bp | Mouse | Lung | rep_3 | 35290801 | 5.26e-15 |
| Abi3bp | Mouse | Brain | OFB_adpolb_rep2 | 33083725 | 3.67e-03 |
| Abi3bp | Mouse | Brain | OFB_wt_rep5 | 33083725 | 7.35e-05 |
| Abi3bp | Mouse | Brain | OFB_wt_rep6 | 33083725 | 2.46e-05 |
| spatial pattern gene map.(click to enlarge the image in a new window) |
| H&E staining (if available) | Singel gene map |
Kidney_CLP_H&E  |  |
Kidney_IRI_H&E  |  |
Kidney_Sham_H&E  |  |
Kidney_rep_1_H&E  |  |
Kidney_rep_5_H&E  |  |
Brain_rep_1_H&E  | |
Brain_N03_D2_H&E  |  |
Lung_rep_1_H&E  |  |
Lung_rep_2_H&E  |  |
Lung_rep_3_H&E  |  |
Brain_OFB_adpolb_rep2_H&E  | |
Brain_OFB_wt_rep5_H&E  | |
Brain_OFB_wt_rep6_H&E  |
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Spatial pattern pathway has Abi3bp envolved |
| Symbol | Pathway | Species | Tissue type | Replication | P-value |
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Abi3bp function as liang/receptor in single cell data |
| Tissue | Source | SourceCell | Target | TargetCell | PMID | Group |
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Abi3bp function as liang/receptor across spatial transcriptomics tissue |
| Interactions using deconvoluted spatial data. |
| Ligand | Receptor | LR pair | Tissue | Replication |
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Transcription factor for Abi3bp envolved |
| Transcription factor analysis using single cell data. |
| TF | Tissue | Group | Cell types | Target genes | Rss score |
| Motif information. |
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Related Drugs for Abi3bp |
| Approved drugs targeting this gene. (DrugBank Version 5.1.9 2022-01-04) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for Abi3bp |
| Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | Pubmeds | Source |
| Abi3bp | C0014175 | Endometriosis | 1 | CTD_human |
| Abi3bp | C0041696 | Unipolar Depression | 1 | PSYGENET |
| Abi3bp | C0269102 | Endometrioma | 1 | CTD_human |
| Abi3bp | C1269683 | Major Depressive Disorder | 1 | PSYGENET |
