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	Gene summary
	Spatial pattern genes
	Spatial pattern pathway
	Cell cell interactions using single cell data
	Cell-cell/spot-spot interactions using spatial data
	Transcription factors events
	Related drugs with this gene
	Related diseases with this gene

Spatial pattern gene: Pabpc4 (spascer ID:230721)

Gene summary for Pabpc4

Gene summary

Gene information
	Species	Mouse
	Gene symbol	Pabpc4
	Gene ID	230721
	Gene name	poly(A) binding protein, cytoplasmic 4
	Synonyms	-
	Cytomap	4\|4 D2.2
	Type of gene	protein-coding
	Description	polyadenylate-binding protein 4
	Modification date	20220424
	UniProtAcc

Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).

Gene	GO ID	GO term	PubMed ID	Category
Pabpc4	GO:0003723	RNA binding	21873635	Function
Pabpc4	GO:0003730	mRNA 3'-UTR binding	21873635	Function
Pabpc4	GO:0005634	nucleus	21873635	Component
Pabpc4	GO:0005829	cytosol	21873635	Component
Pabpc4	GO:0008143	poly(A) binding	21873635	Function
Pabpc4	GO:0008266	poly(U) RNA binding	21873635	Function
Pabpc4	GO:0010494	cytoplasmic stress granule	21873635	Component
Pabpc4	GO:1990904	ribonucleoprotein complex	21873635	Component

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Spatial pattern events for Pabpc4

spatial pattern gene list.

Gene symbol	Species	Tissue	Replication	PMID	Adj p-value
Pabpc4	Mouse	Embryo	2H	34210887	3.01e-06
Pabpc4	Mouse	Embryo	3D	34210887	6.19e-08
Pabpc4	Mouse	Embryo	rep_4	33188776	5.08e-15
Pabpc4	Mouse	Embryo	rep_13	33188776	8.82e-13
Pabpc4	Mouse	Kidney	IRI	34003797	2.29e-15
Pabpc4	Mouse	Brain	rep_3	35027729	4.23e-08
Pabpc4	Mouse	Intestine	rep_4	35149721	2.30e-15
Pabpc4	Mouse	Lung	rep_1	35290801	6.56e-15
Pabpc4	Mouse	Lung	rep_2	35290801	1.42e-14
Pabpc4	Mouse	Lung	rep_3	35290801	3.52e-07
Pabpc4	Mouse	Lung	rep_4	35290801	5.40e-15

spatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)	Singel gene map
Kidney_IRI_H&E
Brain_rep_3_H&E
Lung_rep_1_H&E
Lung_rep_2_H&E
Lung_rep_3_H&E
Lung_rep_4_H&E

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Spatial pattern pathway has Pabpc4 envolved

Symbol	Pathway	Species	Tissue type	Replication	P-value
Pabpc4	GOBP_Mrna_Metabolic_Process	Mouse	Spinal cord	CN94_E1	5.9e-06
Pabpc4	GOBP_Myeloid_Cell_Differentiation	Mouse	Spinal cord	CN94_E1	2.9e-06
Pabpc4	GOBP_Regulation_Of_Mrna_Catabolic_Process	Mouse	Spinal cord	CN94_E1	3.7e-06
Pabpc4	GOBP_Regulation_Of_Mrna_Metabolic_Process	Mouse	Spinal cord	CN94_E1	5.8e-06
Pabpc4	GOBP_Response_To_Wounding	Mouse	Spinal cord	CN94_E1	4.7e-06
Pabpc4	GOBP_Myeloid_Cell_Development	Mouse	Spinal cord	L7bCN02_E1	2.0e-06
Pabpc4	GOBP_Amide_Biosynthetic_Process	Mouse	Spinal cord	L7CN45_C1	2.2e-09
Pabpc4	GOBP_Cellular_Amide_Metabolic_Process	Mouse	Spinal cord	L7CN45_C1	3.4e-09
Pabpc4	GOBP_Immune_System_Development	Mouse	Spinal cord	L7CN45_C1	8.5e-07
Pabpc4	GOBP_Macromolecule_Catabolic_Process	Mouse	Spinal cord	L7CN45_C1	7.5e-06
Pabpc4	GOBP_Negative_Regulation_Of_Gene_Expression	Mouse	Spinal cord	L7CN45_C1	5.6e-06
Pabpc4	GOBP_Organic_Cyclic_Compound_Catabolic_Process	Mouse	Spinal cord	L7CN45_C1	5.6e-06
Pabpc4	GOBP_Organonitrogen_Compound_Biosynthetic_Process	Mouse	Spinal cord	L7CN45_C1	5.6e-08
Pabpc4	GOBP_Peptide_Biosynthetic_Process	Mouse	Spinal cord	L7CN45_C1	3.5e-08
Pabpc4	GOBP_Peptide_Metabolic_Process	Mouse	Spinal cord	L7CN45_C1	3.4e-09
Pabpc4	GOBP_Posttranscriptional_Regulation_Of_Gene_Expression	Mouse	Spinal cord	L7CN45_C1	7.4e-09
Pabpc4	GOBP_Regulation_Of_Body_Fluid_Levels	Mouse	Spinal cord	L7CN45_C1	9.1e-06
Pabpc4	GOBP_Regulation_Of_Catabolic_Process	Mouse	Spinal cord	L7CN45_C1	3.2e-07
Pabpc4	GOBP_Rna_Catabolic_Process	Mouse	Spinal cord	L7CN45_C1	3.0e-07
Pabpc4	GOBP_Rna_Processing	Mouse	Spinal cord	L7CN45_C1	2.2e-09
Pabpc4	GOBP_Wound_Healing	Mouse	Spinal cord	L7CN47_C1	8.4e-07
Pabpc4	GOBP_Negative_Regulation_Of_Gene_Expression	Mouse	Brain	rep_27	4.7e-05
Pabpc4	GOBP_Amide_Biosynthetic_Process	Mouse	Brain	rep_3	2.5e-86
Pabpc4	GOBP_Cellular_Amide_Metabolic_Process	Mouse	Brain	rep_3	2.1e-87
Pabpc4	GOBP_Immune_System_Development	Mouse	Brain	rep_3	1.3e-52
Pabpc4	GOBP_Macromolecule_Catabolic_Process	Mouse	Brain	rep_3	1.7e-159
Pabpc4	GOBP_Mrna_Metabolic_Process	Mouse	Brain	rep_3	3.9e-221
Pabpc4	GOBP_Myeloid_Cell_Development	Mouse	Brain	rep_3	2.7e-159
Pabpc4	GOBP_Myeloid_Cell_Differentiation	Mouse	Brain	rep_3	1.8e-21
Pabpc4	GOBP_Negative_Regulation_Of_Gene_Expression	Mouse	Brain	rep_3	1.1e-139
Pabpc4	GOBP_Organic_Cyclic_Compound_Catabolic_Process	Mouse	Brain	rep_3	1.2e-230
Pabpc4	GOBP_Organonitrogen_Compound_Biosynthetic_Process	Mouse	Brain	rep_3	2.9e-144
Pabpc4	GOBP_Peptide_Biosynthetic_Process	Mouse	Brain	rep_3	2.1e-69
Pabpc4	GOBP_Peptide_Metabolic_Process	Mouse	Brain	rep_3	1.3e-86
Pabpc4	GOBP_Posttranscriptional_Regulation_Of_Gene_Expression	Mouse	Brain	rep_3	8.5e-206
Pabpc4	GOBP_Regulation_Of_Body_Fluid_Levels	Mouse	Brain	rep_3	1.1e-62
Pabpc4	GOBP_Regulation_Of_Catabolic_Process	Mouse	Brain	rep_3	1.9e-185
Pabpc4	GOBP_Regulation_Of_Mrna_Catabolic_Process	Mouse	Brain	rep_3	7.8e-178
Pabpc4	GOBP_Regulation_Of_Mrna_Metabolic_Process	Mouse	Brain	rep_3	9.2e-182
Pabpc4	GOBP_Response_To_Wounding	Mouse	Brain	rep_3	6.2e-112
Pabpc4	GOBP_Rna_Catabolic_Process	Mouse	Brain	rep_3	3.7e-202
Pabpc4	GOBP_Rna_Processing	Mouse	Brain	rep_3	4.3e-140
Pabpc4	GOBP_Wound_Healing	Mouse	Brain	rep_3	6.2e-109
Pabpc4	GOBP_Amide_Biosynthetic_Process	Mouse	Embryo	rep_14	3.7e-18
Pabpc4	GOBP_Cellular_Amide_Metabolic_Process	Mouse	Embryo	rep_14	4.7e-16
Pabpc4	GOBP_Myeloid_Cell_Development	Mouse	Embryo	rep_14	8.6e-32
Pabpc4	GOBP_Myeloid_Cell_Differentiation	Mouse	Embryo	rep_14	1.3e-11
Pabpc4	GOBP_Organonitrogen_Compound_Biosynthetic_Process	Mouse	Embryo	rep_14	2.4e-12
Pabpc4	GOBP_Peptide_Biosynthetic_Process	Mouse	Embryo	rep_14	2.8e-15
Pabpc4	GOBP_Peptide_Metabolic_Process	Mouse	Embryo	rep_14	4.7e-16
Pabpc4	GOBP_Posttranscriptional_Regulation_Of_Gene_Expression	Mouse	Embryo	rep_14	1.4e-11
Pabpc4	GOBP_Rna_Processing	Mouse	Embryo	rep_14	3.5e-14
Pabpc4	GOBP_Immune_System_Development	Mouse	Embryo	rep_1	0.0e+00
Pabpc4	GOBP_Mrna_Metabolic_Process	Mouse	Embryo	rep_1	5.8e-21
Pabpc4	GOBP_Myeloid_Cell_Differentiation	Mouse	Embryo	rep_1	2.4e-139
Pabpc4	GOBP_Negative_Regulation_Of_Gene_Expression	Mouse	Embryo	rep_1	9.4e-07
Pabpc4	GOBP_Regulation_Of_Mrna_Catabolic_Process	Mouse	Embryo	rep_1	8.9e-299
Pabpc4	GOBP_Regulation_Of_Mrna_Metabolic_Process	Mouse	Embryo	rep_1	5.8e-21
Pabpc4	GOBP_Organic_Cyclic_Compound_Catabolic_Process	Mouse	Embryo	rep_2	3.3e-45
Pabpc4	GOBP_Rna_Catabolic_Process	Mouse	Embryo	rep_2	4.2e-77
Pabpc4	GOBP_Rna_Processing	Mouse	Embryo	rep_2	2.4e-14
Pabpc4	GOBP_Regulation_Of_Body_Fluid_Levels	Mouse	Kidney	Nep	1.6e-16
Pabpc4	GOBP_Response_To_Wounding	Mouse	Kidney	Nep	1.6e-16
Pabpc4	GOBP_Wound_Healing	Mouse	Kidney	Nep	1.6e-16
Pabpc4	GOBP_Amide_Biosynthetic_Process	Mouse	Kidney	rep_2	1.9e-84
Pabpc4	GOBP_Cellular_Amide_Metabolic_Process	Mouse	Kidney	rep_2	2.5e-85
Pabpc4	GOBP_Immune_System_Development	Mouse	Kidney	rep_2	4.6e-22
Pabpc4	GOBP_Macromolecule_Catabolic_Process	Mouse	Kidney	rep_2	7.0e-40
Pabpc4	GOBP_Mrna_Metabolic_Process	Mouse	Kidney	rep_2	3.1e-08
Pabpc4	GOBP_Myeloid_Cell_Development	Mouse	Kidney	rep_2	4.3e-29
Pabpc4	GOBP_Negative_Regulation_Of_Gene_Expression	Mouse	Kidney	rep_2	1.0e-19
Pabpc4	GOBP_Organonitrogen_Compound_Biosynthetic_Process	Mouse	Kidney	rep_2	8.9e-78
Pabpc4	GOBP_Peptide_Biosynthetic_Process	Mouse	Kidney	rep_2	2.9e-85
Pabpc4	GOBP_Peptide_Metabolic_Process	Mouse	Kidney	rep_2	1.4e-80
Pabpc4	GOBP_Posttranscriptional_Regulation_Of_Gene_Expression	Mouse	Kidney	rep_2	1.1e-92
Pabpc4	GOBP_Regulation_Of_Catabolic_Process	Mouse	Kidney	rep_2	6.3e-37
Pabpc4	GOBP_Regulation_Of_Mrna_Catabolic_Process	Mouse	Kidney	rep_2	3.6e-42
Pabpc4	GOBP_Regulation_Of_Mrna_Metabolic_Process	Mouse	Kidney	rep_2	1.1e-20
Pabpc4	GOBP_Response_To_Wounding	Mouse	Kidney	rep_2	2.1e-60
Pabpc4	GOBP_Rna_Processing	Mouse	Kidney	rep_2	1.1e-71
Pabpc4	GOBP_Wound_Healing	Mouse	Kidney	rep_2	6.5e-45
Pabpc4	GOBP_Mrna_Metabolic_Process	Mouse	Liver	CN16-D2	5.2e-07
Pabpc4	GOBP_Immune_System_Development	Mouse	Liver	CN73-C1	2.2e-07
Pabpc4	GOBP_Response_To_Wounding	Mouse	Liver	CN73-C1	1.1e-07
Pabpc4	GOBP_Wound_Healing	Mouse	Liver	CN73-C1	1.1e-08
Pabpc4	GOBP_Immune_System_Development	Mouse	Liver	rep_16	5.3e-11
Pabpc4	GOBP_Myeloid_Cell_Development	Mouse	Liver	rep_16	1.5e-11
Pabpc4	GOBP_Regulation_Of_Body_Fluid_Levels	Mouse	Liver	rep_16	6.1e-20
Pabpc4	GOBP_Regulation_Of_Mrna_Catabolic_Process	Mouse	Liver	rep_16	4.7e-08
Pabpc4	GOBP_Response_To_Wounding	Mouse	Liver	rep_16	1.3e-13
Pabpc4	GOBP_Wound_Healing	Mouse	Liver	rep_16	3.5e-11
Pabpc4	GOBP_Amide_Biosynthetic_Process	Mouse	Lymph	MS-1	1.3e-09
Pabpc4	GOBP_Cellular_Amide_Metabolic_Process	Mouse	Lymph	MS-1	5.8e-11
Pabpc4	GOBP_Immune_System_Development	Mouse	Lymph	MS-1	1.2e-13
Pabpc4	GOBP_Macromolecule_Catabolic_Process	Mouse	Lymph	MS-1	1.2e-13
Pabpc4	GOBP_Mrna_Metabolic_Process	Mouse	Lymph	MS-1	3.2e-11
Pabpc4	GOBP_Myeloid_Cell_Development	Mouse	Lymph	MS-1	8.4e-14
Pabpc4	GOBP_Myeloid_Cell_Differentiation	Mouse	Lymph	MS-1	1.9e-13
Pabpc4	GOBP_Negative_Regulation_Of_Gene_Expression	Mouse	Lymph	MS-1	6.3e-11
Pabpc4	GOBP_Organic_Cyclic_Compound_Catabolic_Process	Mouse	Lymph	MS-1	1.2e-13
Pabpc4	GOBP_Organonitrogen_Compound_Biosynthetic_Process	Mouse	Lymph	MS-1	1.4e-09
Pabpc4	GOBP_Peptide_Biosynthetic_Process	Mouse	Lymph	MS-1	7.1e-07
Pabpc4	GOBP_Peptide_Metabolic_Process	Mouse	Lymph	MS-1	5.8e-11
Pabpc4	GOBP_Posttranscriptional_Regulation_Of_Gene_Expression	Mouse	Lymph	MS-1	7.1e-09
Pabpc4	GOBP_Regulation_Of_Catabolic_Process	Mouse	Lymph	MS-1	2.3e-12
Pabpc4	GOBP_Regulation_Of_Mrna_Catabolic_Process	Mouse	Lymph	MS-1	2.1e-10
Pabpc4	GOBP_Regulation_Of_Mrna_Metabolic_Process	Mouse	Lymph	MS-1	3.3e-08
Pabpc4	GOBP_Rna_Catabolic_Process	Mouse	Lymph	MS-1	8.7e-12
Pabpc4	GOBP_Rna_Processing	Mouse	Lymph	MS-1	2.0e-09
Pabpc4	GOBP_Macromolecule_Catabolic_Process	Mouse	Lung	rep_1	2.0e-21
Pabpc4	GOBP_Negative_Regulation_Of_Gene_Expression	Mouse	Lung	rep_1	4.5e-23
Pabpc4	GOBP_Posttranscriptional_Regulation_Of_Gene_Expression	Mouse	Lung	rep_1	1.6e-15
Pabpc4	GOBP_Regulation_Of_Catabolic_Process	Mouse	Lung	rep_1	1.2e-11
Pabpc4	GOBP_Amide_Biosynthetic_Process	Mouse	Brain	HP_ad_rep7	8.0e-10
Pabpc4	GOBP_Cellular_Amide_Metabolic_Process	Mouse	Brain	HP_ad_rep7	5.6e-11
Pabpc4	GOBP_Immune_System_Development	Mouse	Brain	HP_ad_rep7	8.3e-09
Pabpc4	GOBP_Macromolecule_Catabolic_Process	Mouse	Brain	HP_ad_rep7	1.3e-09
Pabpc4	GOBP_Mrna_Metabolic_Process	Mouse	Brain	HP_ad_rep7	2.2e-09
Pabpc4	GOBP_Myeloid_Cell_Development	Mouse	Brain	HP_ad_rep7	3.8e-09
Pabpc4	GOBP_Myeloid_Cell_Differentiation	Mouse	Brain	HP_ad_rep7	1.2e-09
Pabpc4	GOBP_Negative_Regulation_Of_Gene_Expression	Mouse	Brain	HP_ad_rep7	2.1e-08
Pabpc4	GOBP_Organonitrogen_Compound_Biosynthetic_Process	Mouse	Brain	HP_ad_rep7	2.8e-08
Pabpc4	GOBP_Peptide_Biosynthetic_Process	Mouse	Brain	HP_ad_rep7	4.4e-10
Pabpc4	GOBP_Peptide_Metabolic_Process	Mouse	Brain	HP_ad_rep7	2.8e-10
Pabpc4	GOBP_Posttranscriptional_Regulation_Of_Gene_Expression	Mouse	Brain	HP_ad_rep7	1.9e-10
Pabpc4	GOBP_Regulation_Of_Catabolic_Process	Mouse	Brain	HP_ad_rep7	3.3e-07
Pabpc4	GOBP_Regulation_Of_Mrna_Metabolic_Process	Mouse	Brain	HP_ad_rep7	9.2e-08
Pabpc4	GOBP_Response_To_Wounding	Mouse	Brain	HP_ad_rep7	4.3e-07
Pabpc4	GOBP_Rna_Catabolic_Process	Mouse	Brain	HP_ad_rep7	5.9e-09
Pabpc4	GOBP_Rna_Processing	Mouse	Brain	HP_ad_rep7	2.7e-09
Pabpc4	GOBP_Organic_Cyclic_Compound_Catabolic_Process	Mouse	Brain	HP_polb_rep9	1.6e-08
Pabpc4	GOBP_Regulation_Of_Body_Fluid_Levels	Mouse	Brain	HP_polb_rep9	2.9e-10

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Pabpc4 function as liang/receptor in single cell data

Tissue

Source

SourceCell

Target

TargetCell

PMID

Group

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Pabpc4 function as liang/receptor across spatial transcriptomics tissue

Interactions using deconvoluted spatial data.

Ligand

Receptor

LR pair

Tissue

Replication

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Transcription factor for Pabpc4 envolved

Transcription factor analysis using single cell data.

Tissue

Group

Cell types

Target genes

Rss score

Motif information.

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Related Drugs for Pabpc4

Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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Related Diseases for Pabpc4

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

Pubmeds

Source