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	Gene summary
	Spatial pattern genes
	Spatial pattern pathway
	Cell cell interactions using single cell data
	Cell-cell/spot-spot interactions using spatial data
	Transcription factors events
	Related drugs with this gene
	Related diseases with this gene

Spatial pattern gene: Olfm3 (spascer ID:229759)

Gene summary for Olfm3

Gene summary

Gene information
	Species	Mouse
	Gene symbol	Olfm3
	Gene ID	229759
	Gene name	olfactomedin 3
	Synonyms	B230206G02Rik
	Cytomap	3\|3 F3
	Type of gene	protein-coding
	Description	noelin-3optimedin
	Modification date	20220424
	UniProtAcc	P63056

Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).

Gene	GO ID	GO term	PubMed ID	Category
Olfm3	GO:0005615	extracellular space	21873635	Component
Olfm3	GO:0007165	signal transduction	21873635	Process

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Spatial pattern events for Olfm3

spatial pattern gene list.

Gene symbol	Species	Tissue	Replication	PMID	Adj p-value
Olfm3	Mouse	Brain	S1	34413515	2.07e-15
Olfm3	Mouse	Brain	S2	34413515	1.56e-15
Olfm3	Mouse	Brain	S3	34413515	1.64e-15
Olfm3	Mouse	Brain	S4	34413515	1.37e-15
Olfm3	Mouse	Brain	S6	34413515	1.46e-15
Olfm3	Mouse	Brain	S7	34413515	1.55e-15
Olfm3	Mouse	Brain	04A	32637622	9.48e-06
Olfm3	Mouse	Brain	04B	32637622	1.21e-08
Olfm3	Mouse	Brain	16A	32637622	6.48e-06
Olfm3	Mouse	Brain	17B	32637622	9.25e-06
Olfm3	Mouse	Brain	18A	32637622	2.65e-09
Olfm3	Mouse	Brain	18B	32637622	3.09e-06
Olfm3	Mouse	Brain	19B	32637622	9.70e-07
Olfm3	Mouse	Brain	20A	32637622	9.57e-12
Olfm3	Mouse	Brain	21A	32637622	4.76e-06
Olfm3	Mouse	Brain	22A	32637622	6.48e-12
Olfm3	Mouse	Brain	22B	32637622	8.63e-10
Olfm3	Mouse	Brain	23A	32637622	3.45e-06
Olfm3	Mouse	Brain	23B	32637622	5.64e-06
Olfm3	Mouse	Brain	24A	32637622	5.95e-08
Olfm3	Mouse	Brain	25A	32637622	2.65e-11
Olfm3	Mouse	Brain	26A	32637622	4.41e-08
Olfm3	Mouse	Brain	26B	32637622	1.02e-10
Olfm3	Mouse	Brain	27A	32637622	4.93e-10
Olfm3	Mouse	Brain	27B	32637622	1.39e-06
Olfm3	Mouse	Brain	28A	32637622	4.84e-11
Olfm3	Mouse	Brain	28B	32637622	2.48e-07
Olfm3	Mouse	Brain	29B	32637622	2.45e-06
Olfm3	Mouse	Brain	33A	32637622	1.62e-07
Olfm3	Mouse	Brain	36B	32637622	1.97e-06
Olfm3	Mouse	Brain	rep_1	35141374	6.80e-15
Olfm3	Mouse	Brain	rep_2	35141374	3.05e-15
Olfm3	Mouse	Brain	rep_3	35141374	3.00e-15
Olfm3	Mouse	Brain	rep_4	35141374	1.57e-15
Olfm3	Mouse	Brain	rep_5	35141374	1.47e-15
Olfm3	Mouse	Brain	rep_6	35141374	5.96e-15
Olfm3	Mouse	Kidney	CLP	34003797	5.14e-09
Olfm3	Mouse	Brain	rep_1	33469025	1.30e-15
Olfm3	Mouse	Brain	rep_1	35027729	1.66e-15
Olfm3	Mouse	Brain	rep_2	35027729	1.57e-15
Olfm3	Mouse	Brain	rep_3	35027729	1.32e-15
Olfm3	Mouse	Brain	rep_4	35027729	1.76e-15
Olfm3	Mouse	Brain	rep_5	35027729	1.46e-15
Olfm3	Mouse	Brain	B02_E1	32702314	1.99e-06
Olfm3	Mouse	Brain	B03_D2	32702314	2.17e-09
Olfm3	Mouse	Brain	B04_E1	32702314	8.48e-11
Olfm3	Mouse	Brain	B05_E2	32702314	2.32e-06
Olfm3	Mouse	Brain	N05_D2	32702314	1.10e-07
Olfm3	Mouse	Brain	rep_1	35210624	1.74e-15
Olfm3	Mouse	Brain	rep_2	35210624	1.74e-15
Olfm3	Mouse	Brain	rep_3	35210624	1.82e-15
Olfm3	Mouse	Brain	rep_5	35210624	2.07e-15
Olfm3	Mouse	Brain	rep_6	35210624	6.92e-15
Olfm3	Mouse	Brain	rep_7	35210624	1.87e-15

spatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)	Singel gene map
Brain_rep_1_H&E
Brain_rep_2_H&E
Brain_rep_3_H&E
Brain_rep_4_H&E
Brain_rep_5_H&E
Brain_rep_6_H&E
Kidney_CLP_H&E
Brain_rep_1_H&E
Brain_rep_1_H&E
Brain_rep_2_H&E
Brain_rep_3_H&E
Brain_rep_4_H&E
Brain_rep_5_H&E
Brain_B02_E1_H&E
Brain_B03_D2_H&E
Brain_B04_E1_H&E
Brain_B05_E2_H&E
Brain_N05_D2_H&E

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Spatial pattern pathway has Olfm3 envolved

Symbol	Pathway	Species	Tissue type	Replication	P-value
Olfm3	GOBP_Animal_Organ_Morphogenesis	Mouse	Spinal cord	CN94_E1	6.6e-06
Olfm3	GOBP_Eye_Photoreceptor_Cell_Differentiation	Mouse	Spinal cord	CN94_E1	8.3e-06
Olfm3	GOBP_Sensory_Organ_Development	Mouse	Spinal cord	CN94_E1	4.5e-06
Olfm3	GOBP_Eye_Morphogenesis	Mouse	Spinal cord	L7bCN02_E1	4.0e-07
Olfm3	GOBP_Neurogenesis	Mouse	Spinal cord	L7CN45_C1	3.4e-09
Olfm3	GOBP_Neuron_Development	Mouse	Spinal cord	L7CN45_C1	5.6e-08
Olfm3	GOBP_Neuron_Differentiation	Mouse	Spinal cord	L7CN45_C1	3.4e-09
Olfm3	GOBP_Photoreceptor_Cell_Development	Mouse	Spinal cord	L7CN45_C1	1.6e-06
Olfm3	GOBP_Sensory_Organ_Morphogenesis	Mouse	Spinal cord	L7CN45_C1	1.7e-07
Olfm3	GOBP_Sensory_System_Development	Mouse	Spinal cord	L7CN45_C1	3.4e-08
Olfm3	GOBP_Animal_Organ_Morphogenesis	Mouse	Brain	rep_27	2.0e-06
Olfm3	GOBP_Sensory_Organ_Development	Mouse	Brain	rep_27	4.9e-05
Olfm3	GOBP_Sensory_System_Development	Mouse	Brain	rep_27	1.2e-05
Olfm3	GOBP_Eye_Photoreceptor_Cell_Development	Mouse	Brain	rep_41	2.0e-05
Olfm3	GOBP_Photoreceptor_Cell_Development	Mouse	Brain	rep_75	3.8e-05
Olfm3	GOBP_Eye_Photoreceptor_Cell_Development	Mouse	Brain	rep_1	1.2e-26
Olfm3	GOBP_Eye_Photoreceptor_Cell_Differentiation	Mouse	Brain	rep_1	1.6e-13
Olfm3	GOBP_Neurogenesis	Mouse	Brain	rep_1	6.4e-19
Olfm3	GOBP_Neuron_Development	Mouse	Brain	rep_1	3.8e-29
Olfm3	GOBP_Neuron_Differentiation	Mouse	Brain	rep_1	8.7e-25
Olfm3	GOBP_Photoreceptor_Cell_Development	Mouse	Brain	rep_1	3.3e-08
Olfm3	GOBP_Photoreceptor_Cell_Differentiation	Mouse	Brain	rep_1	3.1e-09
Olfm3	GOBP_Sensory_System_Development	Mouse	Brain	rep_1	1.6e-12
Olfm3	GOBP_Animal_Organ_Morphogenesis	Mouse	Brain	rep_3	5.4e-57
Olfm3	GOBP_Eye_Morphogenesis	Mouse	Brain	rep_3	4.2e-134
Olfm3	GOBP_Sensory_Organ_Development	Mouse	Brain	rep_3	1.6e-123
Olfm3	GOBP_Sensory_Organ_Morphogenesis	Mouse	Brain	rep_3	1.5e-133
Olfm3	GOBP_Sensory_Organ_Morphogenesis	Mouse	Embryo	rep_14	7.1e-17
Olfm3	GOBP_Animal_Organ_Morphogenesis	Mouse	Embryo	rep_1	1.7e-10
Olfm3	GOBP_Neurogenesis	Mouse	Embryo	rep_1	8.2e-08
Olfm3	GOBP_Photoreceptor_Cell_Differentiation	Mouse	Embryo	rep_1	6.1e-190
Olfm3	GOBP_Sensory_System_Development	Mouse	Embryo	rep_1	1.3e-72
Olfm3	GOBP_Neuron_Development	Mouse	Embryo	rep_2	4.8e-18
Olfm3	GOBP_Neuron_Differentiation	Mouse	Embryo	rep_3	2.1e-193
Olfm3	GOBP_Sensory_Organ_Development	Mouse	Embryo	rep_3	2.1e-266
Olfm3	GOBP_Sensory_Organ_Morphogenesis	Mouse	Embryo	rep_3	9.1e-62
Olfm3	GOBP_Neurogenesis	Mouse	Kidney	Nep	4.6e-22
Olfm3	GOBP_Neuron_Development	Mouse	Kidney	Nep	8.3e-23
Olfm3	GOBP_Neuron_Differentiation	Mouse	Kidney	Nep	8.3e-23
Olfm3	GOBP_Animal_Organ_Morphogenesis	Mouse	Kidney	rep_2	4.2e-71
Olfm3	GOBP_Eye_Morphogenesis	Mouse	Kidney	rep_2	1.2e-85
Olfm3	GOBP_Eye_Photoreceptor_Cell_Development	Mouse	Kidney	rep_2	6.2e-66
Olfm3	GOBP_Eye_Photoreceptor_Cell_Differentiation	Mouse	Kidney	rep_2	1.7e-33
Olfm3	GOBP_Neurogenesis	Mouse	Kidney	rep_2	2.4e-78
Olfm3	GOBP_Neuron_Development	Mouse	Kidney	rep_2	1.3e-42
Olfm3	GOBP_Neuron_Differentiation	Mouse	Kidney	rep_2	3.9e-32
Olfm3	GOBP_Photoreceptor_Cell_Development	Mouse	Kidney	rep_2	1.8e-100
Olfm3	GOBP_Photoreceptor_Cell_Differentiation	Mouse	Kidney	rep_2	7.4e-22
Olfm3	GOBP_Sensory_Organ_Development	Mouse	Kidney	rep_2	4.7e-27
Olfm3	GOBP_Sensory_Organ_Morphogenesis	Mouse	Kidney	rep_2	3.2e-88
Olfm3	GOBP_Sensory_System_Development	Mouse	Kidney	rep_2	7.2e-08
Olfm3	GOBP_Eye_Photoreceptor_Cell_Development	Mouse	Liver	CN16-D2	2.6e-13
Olfm3	GOBP_Eye_Photoreceptor_Cell_Differentiation	Mouse	Liver	CN16-D2	1.3e-10
Olfm3	GOBP_Neuron_Differentiation	Mouse	Liver	CN16-D2	5.1e-07
Olfm3	GOBP_Photoreceptor_Cell_Development	Mouse	Liver	CN16-D2	1.2e-09
Olfm3	GOBP_Photoreceptor_Cell_Differentiation	Mouse	Liver	CN16-D2	1.9e-08
Olfm3	GOBP_Eye_Photoreceptor_Cell_Development	Mouse	Liver	rep_15	6.3e-17
Olfm3	GOBP_Photoreceptor_Cell_Development	Mouse	Liver	rep_15	1.8e-07
Olfm3	GOBP_Photoreceptor_Cell_Differentiation	Mouse	Liver	rep_16	3.6e-18
Olfm3	GOBP_Animal_Organ_Morphogenesis	Mouse	Lymph	MS-1	4.4e-09
Olfm3	GOBP_Eye_Morphogenesis	Mouse	Lymph	MS-1	1.6e-09
Olfm3	GOBP_Neurogenesis	Mouse	Lymph	MS-1	4.1e-08
Olfm3	GOBP_Sensory_Organ_Development	Mouse	Lymph	MS-1	1.5e-10
Olfm3	GOBP_Sensory_Organ_Morphogenesis	Mouse	Lymph	MS-1	3.6e-12
Olfm3	GOBP_Sensory_System_Development	Mouse	Lymph	MS-1	1.2e-07
Olfm3	GOBP_Eye_Photoreceptor_Cell_Development	Mouse	Brain	rep_4	5.5e-83
Olfm3	GOBP_Eye_Photoreceptor_Cell_Differentiation	Mouse	Brain	rep_4	2.0e-09
Olfm3	GOBP_Photoreceptor_Cell_Development	Mouse	Brain	rep_4	3.3e-28
Olfm3	GOBP_Photoreceptor_Cell_Differentiation	Mouse	Brain	rep_4	8.9e-28
Olfm3	GOBP_Eye_Morphogenesis	Mouse	Brain	HP_ad_rep7	4.2e-07
Olfm3	GOBP_Eye_Photoreceptor_Cell_Differentiation	Mouse	Brain	HP_ad_rep7	1.3e-14
Olfm3	GOBP_Neurogenesis	Mouse	Brain	HP_ad_rep7	3.9e-07
Olfm3	GOBP_Neuron_Development	Mouse	Brain	HP_ad_rep7	3.9e-07
Olfm3	GOBP_Neuron_Differentiation	Mouse	Brain	HP_ad_rep7	3.9e-07
Olfm3	GOBP_Photoreceptor_Cell_Differentiation	Mouse	Brain	HP_ad_rep7	3.5e-12
Olfm3	GOBP_Sensory_Organ_Development	Mouse	Brain	HP_ad_rep7	4.6e-10
Olfm3	GOBP_Sensory_Organ_Morphogenesis	Mouse	Brain	HP_ad_rep7	9.0e-08
Olfm3	GOBP_Sensory_System_Development	Mouse	Brain	HP_ad_rep7	1.6e-11
Olfm3	GOBP_Photoreceptor_Cell_Development	Mouse	Brain	HP_adpolb_rep1	1.1e-07
Olfm3	GOBP_Eye_Photoreceptor_Cell_Development	Mouse	Brain	HP_polb_rep9	3.6e-13

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Olfm3 function as liang/receptor in single cell data

Tissue

Source

SourceCell

Target

TargetCell

PMID

Group

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Olfm3 function as liang/receptor across spatial transcriptomics tissue

Interactions using deconvoluted spatial data.

Ligand

Receptor

LR pair

Tissue

Replication

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Transcription factor for Olfm3 envolved

Transcription factor analysis using single cell data.

Tissue

Group

Cell types

Target genes

Rss score

Motif information.

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Related Drugs for Olfm3

Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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Related Diseases for Olfm3

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

Pubmeds

Source