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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

Spatial pattern genes

Soverview

Spatial pattern pathway

Soverview

Cell cell interactions using single cell data

Soverview

Cell-cell/spot-spot interactions using spatial data

Soverview

Transcription factors events

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Related drugs with this gene

Soverview

Related diseases with this gene

Spatial pattern gene: Nipal2 (spascer ID:223473)

Gene summary for Nipal2

check button Gene summary
Gene information
SpeciesMouse
Gene symbol

Nipal2

Gene ID

223473

Gene nameNIPA-like domain containing 2
Synonyms9330161F08Rik|Npal2
Cytomap15|15 B3.1
Type of geneprotein-coding
DescriptionNIPA-like protein 2
Modification date20220424
UniProtAcc

Q91WC7


check button Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).
GeneGO IDGO termPubMed IDCategory
Nipal2

GO:0015693

magnesium ion transport

21873635

Process
Nipal2

GO:0016020

membrane

21873635

Component

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Spatial pattern events for Nipal2

check buttonspatial pattern gene list.
Gene symbolSpeciesTissueReplicationPMIDAdj p-value
Nipal2MouseBrainS1 344135153.73e-15
Nipal2MouseBrainS2 344135151.56e-15
Nipal2MouseBrainS3 344135153.51e-12
Nipal2MouseBrainS4 344135152.48e-10
Nipal2MouseBrainS6 344135155.07e-15
Nipal2MouseBrainS7 344135151.55e-15
Nipal2MouseKidneyrep_5 348531512.74e-09
Nipal2MouseBrainrep_1 334690255.87e-09
Nipal2MouseBrainrep_1 350277292.13e-06
Nipal2MouseBrainrep_3 350277291.32e-15
Nipal2MouseBrainrep_4 350277291.76e-15
Nipal2MouseBrainrep_5 350277291.46e-15

check buttonspatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)Singel gene map
Kidney_rep_5_H&E
boxplot

boxplot
Brain_rep_1_H&E
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Brain_rep_1_H&E
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boxplot
Brain_rep_3_H&E
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Brain_rep_4_H&E
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boxplot
Brain_rep_5_H&E
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Spatial pattern pathway has Nipal2 envolved


SymbolPathwaySpeciesTissue typeReplicationP-value
Nipal2GOBP_Magnesium_Ion_TransportMouseSpinal cordCN93_D2 6.5e-06
Nipal2GOBP_Cation_TransportMouseSpinal cordCN94_E1 5.8e-06
Nipal2GOBP_Cation_Transmembrane_TransportMouseSpinal cordL7CN45_C1 1.3e-08
Nipal2GOBP_Inorganic_Ion_Transmembrane_TransportMouseSpinal cordL7CN45_C1 6.6e-07
Nipal2GOBP_Metal_Ion_TransportMouseSpinal cordL7CN45_C1 4.4e-08
Nipal2GOBP_Transmembrane_TransportMouseSpinal cordL7CN45_C1 3.5e-08
Nipal2GOBP_Cation_Transmembrane_TransportMouseBrainrep_1 4.4e-30
Nipal2GOBP_Cation_TransportMouseBrainrep_1 1.5e-22
Nipal2GOBP_Inorganic_Ion_Transmembrane_TransportMouseBrainrep_1 8.6e-24
Nipal2GOBP_Metal_Ion_TransportMouseBrainrep_1 5.1e-10
Nipal2GOBP_Transmembrane_TransportMouseBrainrep_1 3.1e-23
Nipal2GOBP_Magnesium_Ion_TransportMouseBrainrep_3 2.0e-88
Nipal2GOBP_Magnesium_Ion_TransportMouseEmbryorep_14 1.2e-29
Nipal2GOBP_Transmembrane_TransportMouseKidneyNep 4.2e-26
Nipal2GOBP_Cation_Transmembrane_TransportMouseKidneyrep_2 7.3e-17
Nipal2GOBP_Cation_TransportMouseKidneyrep_2 5.9e-23
Nipal2GOBP_Inorganic_Ion_Transmembrane_TransportMouseKidneyrep_2 2.4e-15
Nipal2GOBP_Magnesium_Ion_TransportMouseKidneyrep_2 1.5e-11
Nipal2GOBP_Metal_Ion_TransportMouseKidneyrep_2 7.0e-69
Nipal2GOBP_Transmembrane_TransportMouseKidneyrep_2 2.7e-23
Nipal2GOBP_Magnesium_Ion_TransportMouseLiverCN16-D2 8.7e-14
Nipal2GOBP_Metal_Ion_TransportMouseLiverCN73-C1 6.4e-08
Nipal2GOBP_Cation_Transmembrane_TransportMouseLiverrep_15 8.9e-14
Nipal2GOBP_Inorganic_Ion_Transmembrane_TransportMouseLiverrep_15 2.4e-07
Nipal2GOBP_Cation_TransportMouseLiverrep_16 1.2e-18
Nipal2GOBP_Magnesium_Ion_TransportMouseLiverrep_16 1.9e-26
Nipal2GOBP_Transmembrane_TransportMouseLiverrep_16 1.4e-13
Nipal2GOBP_Metal_Ion_TransportMouseLymphMS-1 1.4e-09
Nipal2GOBP_Cation_TransportMouseBrainHP_ad_rep7 7.5e-07
Nipal2GOBP_Magnesium_Ion_TransportMouseBrainHP_ad_rep7 2.0e-10
Nipal2GOBP_Transmembrane_TransportMouseBrainHP_ad_rep7 3.4e-07
Nipal2GOBP_Cation_Transmembrane_TransportMouseBrainHP_polb_rep9 1.4e-07
Nipal2GOBP_Inorganic_Ion_Transmembrane_TransportMouseBrainHP_polb_rep9 1.1e-07

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Nipal2 function as liang/receptor in single cell data

TissueSourceSourceCellTargetTargetCellPMIDGroup

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Nipal2 function as liang/receptor across spatial transcriptomics tissue

check button Interactions using deconvoluted spatial data.

LigandReceptor LR pairTissueReplication

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Transcription factor for Nipal2 envolved

check buttonTranscription factor analysis using single cell data.
TFTissueGroupCell typesTarget genesRss score

check button Motif information.

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Related Drugs for Nipal2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for Nipal2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease namePubmedsSource
Nipal2C0023893Liver Cirrhosis, Experimental1CTD_human