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	Gene summary
	Spatial pattern genes
	Spatial pattern pathway
	Cell cell interactions using single cell data
	Cell-cell/spot-spot interactions using spatial data
	Transcription factors events
	Related drugs with this gene
	Related diseases with this gene

Spatial pattern gene: Rab3ip (spascer ID:216363)

Gene summary for Rab3ip

Gene summary

Gene information
	Species	Mouse
	Gene symbol	Rab3ip
	Gene ID	216363
	Gene name	RAB3A interacting protein
	Synonyms	B230311A06\|Gtpat12\|Rabin3
	Cytomap	10 D2\|10 64.96 cM
	Type of gene	protein-coding
	Description	rab-3A-interacting proteinSSX2-interacting proteingene trap PAT 12rab3A-interacting proteinrabin-3
	Modification date	20220424
	UniProtAcc	Q68EF0

Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).

Gene	GO ID	GO term	PubMed ID	Category
Rab3ip	GO:0006887	exocytosis	21873635	Process
Rab3ip	GO:0070319	Golgi to plasma membrane transport vesicle	21873635	Component

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Spatial pattern events for Rab3ip

spatial pattern gene list.

Gene symbol	Species	Tissue	Replication	PMID	Adj p-value
Rab3ip	Mouse	Brain	S1	34413515	1.09e-09
Rab3ip	Mouse	Brain	S2	34413515	1.56e-15
Rab3ip	Mouse	Brain	S3	34413515	7.00e-08
Rab3ip	Mouse	Brain	S4	34413515	1.04e-07
Rab3ip	Mouse	Brain	S6	34413515	1.46e-15
Rab3ip	Mouse	Brain	S7	34413515	1.55e-15
Rab3ip	Mouse	Brain	rep_2	35141374	1.90e-08
Rab3ip	Mouse	Brain	rep_3	35141374	1.64e-15
Rab3ip	Mouse	Brain	rep_4	35141374	5.42e-15
Rab3ip	Mouse	Brain	rep_5	35141374	2.68e-15
Rab3ip	Mouse	Brain	rep_6	35141374	1.32e-10
Rab3ip	Mouse	Kidney	IRI	34003797	2.29e-15
Rab3ip	Mouse	Kidney	Sham	34003797	7.36e-08
Rab3ip	Mouse	Kidney	rep_1	34853151	2.42e-15
Rab3ip	Mouse	Brain	rep_1	33469025	1.30e-15
Rab3ip	Mouse	Brain	rep_1	35027729	2.98e-15
Rab3ip	Mouse	Brain	rep_2	35027729	2.83e-15
Rab3ip	Mouse	Brain	rep_3	35027729	1.37e-14
Rab3ip	Mouse	Brain	rep_4	35027729	3.37e-07
Rab3ip	Mouse	Brain	rep_5	35027729	1.11e-13
Rab3ip	Mouse	Brain	rep_2	35210624	5.39e-11

spatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)	Singel gene map
Brain_rep_2_H&E
Brain_rep_3_H&E
Brain_rep_4_H&E
Brain_rep_5_H&E
Brain_rep_6_H&E
Kidney_IRI_H&E
Kidney_Sham_H&E
Kidney_rep_1_H&E
Brain_rep_1_H&E
Brain_rep_1_H&E
Brain_rep_2_H&E
Brain_rep_3_H&E
Brain_rep_4_H&E
Brain_rep_5_H&E

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Spatial pattern pathway has Rab3ip envolved

Symbol	Pathway	Species	Tissue type	Replication	P-value
Rab3ip	GOBP_Cell_Projection_Assembly	Mouse	Spinal cord	CN94_E1	3.2e-06
Rab3ip	GOBP_Organelle_Assembly	Mouse	Spinal cord	CN94_E1	9.5e-06
Rab3ip	GOBP_Cell_Projection_Organization	Mouse	Spinal cord	L7CN45_C1	1.2e-07
Rab3ip	GOBP_Cellular_Macromolecule_Localization	Mouse	Spinal cord	L7CN45_C1	4.2e-07
Rab3ip	GOBP_Cilium_Organization	Mouse	Spinal cord	L7CN45_C1	5.6e-09
Rab3ip	GOBP_Establishment_Of_Protein_Localization	Mouse	Spinal cord	L7CN45_C1	4.4e-06
Rab3ip	GOBP_Intracellular_Protein_Transport	Mouse	Spinal cord	L7CN45_C1	3.6e-07
Rab3ip	GOBP_Intracellular_Transport	Mouse	Spinal cord	L7CN45_C1	4.4e-06
Rab3ip	GOBP_Organelle_Localization	Mouse	Spinal cord	L7CN45_C1	1.4e-08
Rab3ip	GOBP_Protein_Targeting	Mouse	Spinal cord	L7CN45_C1	1.4e-06
Rab3ip	GOBP_Protein_Targeting_To_Membrane	Mouse	Spinal cord	L7CN45_C1	2.9e-06
Rab3ip	GOBP_Secretion	Mouse	Spinal cord	L7CN45_C1	8.1e-09
Rab3ip	GOBP_Establishment_Of_Protein_Localization_To_Membrane	Mouse	Spinal cord	L7CN47_C1	7.0e-06
Rab3ip	GOBP_Exocytosis	Mouse	Spinal cord	L7CN47_C1	7.4e-07
Rab3ip	GOBP_Membrane_Docking	Mouse	Spinal cord	L7CN47_C1	6.8e-07
Rab3ip	GOBP_Cilium_Organization	Mouse	Brain	rep_27	3.1e-06
Rab3ip	GOBP_Secretion	Mouse	Brain	rep_27	8.9e-05
Rab3ip	GOBP_Membrane_Docking	Mouse	Brain	rep_71	9.7e-05
Rab3ip	GOBP_Cell_Projection_Assembly	Mouse	Brain	rep_1	8.3e-09
Rab3ip	GOBP_Cell_Projection_Organization	Mouse	Brain	rep_1	2.6e-08
Rab3ip	GOBP_Establishment_Of_Protein_Localization	Mouse	Brain	rep_1	6.6e-07
Rab3ip	GOBP_Establishment_Of_Protein_Localization_To_Membrane	Mouse	Brain	rep_1	2.9e-25
Rab3ip	GOBP_Exocytosis	Mouse	Brain	rep_1	3.4e-73
Rab3ip	GOBP_Membrane_Docking	Mouse	Brain	rep_1	1.2e-57
Rab3ip	GOBP_Organelle_Localization	Mouse	Brain	rep_1	1.6e-45
Rab3ip	GOBP_Secretion	Mouse	Brain	rep_1	4.1e-45
Rab3ip	GOBP_Cellular_Macromolecule_Localization	Mouse	Brain	rep_3	1.6e-125
Rab3ip	GOBP_Cilium_Organization	Mouse	Brain	rep_3	3.3e-172
Rab3ip	GOBP_Intracellular_Protein_Transport	Mouse	Brain	rep_3	2.7e-132
Rab3ip	GOBP_Intracellular_Transport	Mouse	Brain	rep_3	1.0e-102
Rab3ip	GOBP_Organelle_Assembly	Mouse	Brain	rep_3	2.0e-160
Rab3ip	GOBP_Protein_Targeting	Mouse	Brain	rep_3	2.9e-187
Rab3ip	GOBP_Protein_Targeting_To_Membrane	Mouse	Brain	rep_3	1.5e-197
Rab3ip	GOBP_Establishment_Of_Protein_Localization_To_Membrane	Mouse	Embryo	rep_14	1.7e-10
Rab3ip	GOBP_Protein_Targeting	Mouse	Embryo	rep_14	6.3e-09
Rab3ip	GOBP_Protein_Targeting_To_Membrane	Mouse	Embryo	rep_14	1.4e-25
Rab3ip	GOBP_Cilium_Organization	Mouse	Embryo	rep_1	1.8e-293
Rab3ip	GOBP_Cellular_Macromolecule_Localization	Mouse	Embryo	rep_2	5.5e-15
Rab3ip	GOBP_Cell_Projection_Organization	Mouse	Embryo	rep_3	1.7e-72
Rab3ip	GOBP_Intracellular_Protein_Transport	Mouse	Embryo	rep_4	1.1e-39
Rab3ip	GOBP_Organelle_Assembly	Mouse	Embryo	rep_6	4.1e-70
Rab3ip	GOBP_Cell_Projection_Assembly	Mouse	Kidney	rep_2	3.6e-69
Rab3ip	GOBP_Cell_Projection_Organization	Mouse	Kidney	rep_2	4.1e-48
Rab3ip	GOBP_Cellular_Macromolecule_Localization	Mouse	Kidney	rep_2	3.5e-61
Rab3ip	GOBP_Cilium_Organization	Mouse	Kidney	rep_2	3.5e-79
Rab3ip	GOBP_Establishment_Of_Protein_Localization	Mouse	Kidney	rep_2	9.8e-86
Rab3ip	GOBP_Establishment_Of_Protein_Localization_To_Membrane	Mouse	Kidney	rep_2	4.7e-11
Rab3ip	GOBP_Exocytosis	Mouse	Kidney	rep_2	3.2e-107
Rab3ip	GOBP_Intracellular_Protein_Transport	Mouse	Kidney	rep_2	7.5e-54
Rab3ip	GOBP_Intracellular_Transport	Mouse	Kidney	rep_2	7.9e-80
Rab3ip	GOBP_Membrane_Docking	Mouse	Kidney	rep_2	8.8e-36
Rab3ip	GOBP_Organelle_Assembly	Mouse	Kidney	rep_2	2.8e-62
Rab3ip	GOBP_Organelle_Localization	Mouse	Kidney	rep_2	2.9e-72
Rab3ip	GOBP_Protein_Targeting	Mouse	Kidney	rep_2	1.7e-40
Rab3ip	GOBP_Protein_Targeting_To_Membrane	Mouse	Kidney	rep_2	2.4e-30
Rab3ip	GOBP_Secretion	Mouse	Kidney	rep_2	1.6e-23
Rab3ip	GOBP_Protein_Targeting_To_Membrane	Mouse	Liver	CN16-D2	6.1e-07
Rab3ip	GOBP_Cell_Projection_Organization	Mouse	Liver	rep_16	3.4e-07
Rab3ip	GOBP_Exocytosis	Mouse	Liver	rep_16	8.5e-07
Rab3ip	GOBP_Organelle_Localization	Mouse	Liver	rep_16	2.2e-21
Rab3ip	GOBP_Cell_Projection_Assembly	Mouse	Lymph	MS-1	1.4e-09
Rab3ip	GOBP_Cell_Projection_Organization	Mouse	Lymph	MS-1	1.5e-09
Rab3ip	GOBP_Cellular_Macromolecule_Localization	Mouse	Lymph	MS-1	1.1e-11
Rab3ip	GOBP_Establishment_Of_Protein_Localization	Mouse	Lymph	MS-1	2.5e-11
Rab3ip	GOBP_Establishment_Of_Protein_Localization_To_Membrane	Mouse	Lymph	MS-1	1.3e-10
Rab3ip	GOBP_Exocytosis	Mouse	Lymph	MS-1	1.4e-14
Rab3ip	GOBP_Intracellular_Protein_Transport	Mouse	Lymph	MS-1	3.0e-17
Rab3ip	GOBP_Intracellular_Transport	Mouse	Lymph	MS-1	3.3e-11
Rab3ip	GOBP_Membrane_Docking	Mouse	Lymph	MS-1	1.3e-08
Rab3ip	GOBP_Organelle_Assembly	Mouse	Lymph	MS-1	5.5e-08
Rab3ip	GOBP_Protein_Targeting	Mouse	Lymph	MS-1	2.1e-09
Rab3ip	GOBP_Protein_Targeting_To_Membrane	Mouse	Lymph	MS-1	3.9e-09
Rab3ip	GOBP_Secretion	Mouse	Lymph	MS-1	2.3e-12
Rab3ip	GOBP_Exocytosis	Mouse	Brain	rep_4	2.4e-43
Rab3ip	GOBP_Organelle_Localization	Mouse	Brain	rep_4	3.3e-19
Rab3ip	GOBP_Cell_Projection_Assembly	Mouse	Brain	HP_ad_rep7	1.0e-07
Rab3ip	GOBP_Cell_Projection_Organization	Mouse	Brain	HP_ad_rep7	8.1e-09
Rab3ip	GOBP_Cellular_Macromolecule_Localization	Mouse	Brain	HP_ad_rep7	6.6e-10
Rab3ip	GOBP_Cilium_Organization	Mouse	Brain	HP_ad_rep7	3.0e-08
Rab3ip	GOBP_Establishment_Of_Protein_Localization	Mouse	Brain	HP_ad_rep7	8.7e-10
Rab3ip	GOBP_Intracellular_Protein_Transport	Mouse	Brain	HP_ad_rep7	3.6e-08
Rab3ip	GOBP_Intracellular_Transport	Mouse	Brain	HP_ad_rep7	3.1e-08
Rab3ip	GOBP_Protein_Targeting_To_Membrane	Mouse	Brain	HP_ad_rep7	1.1e-09
Rab3ip	GOBP_Secretion	Mouse	Brain	HP_ad_rep7	1.6e-08
Rab3ip	GOBP_Organelle_Assembly	Mouse	Brain	HP_adpolb_rep1	1.8e-07
Rab3ip	GOBP_Establishment_Of_Protein_Localization_To_Membrane	Mouse	Brain	HP_polb_rep9	3.1e-10
Rab3ip	GOBP_Exocytosis	Mouse	Brain	HP_polb_rep9	2.3e-13
Rab3ip	GOBP_Membrane_Docking	Mouse	Brain	HP_polb_rep9	5.0e-13
Rab3ip	GOBP_Organelle_Localization	Mouse	Brain	HP_polb_rep9	1.7e-09
Rab3ip	GOBP_Protein_Targeting	Mouse	Brain	HP_polb_rep9	1.8e-11

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Rab3ip function as liang/receptor in single cell data

Tissue

Source

SourceCell

Target

TargetCell

PMID

Group

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Rab3ip function as liang/receptor across spatial transcriptomics tissue

Interactions using deconvoluted spatial data.

Ligand

Receptor

LR pair

Tissue

Replication

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Transcription factor for Rab3ip envolved

Transcription factor analysis using single cell data.

Tissue

Group

Cell types

Target genes

Rss score

Motif information.

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Related Drugs for Rab3ip

Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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Related Diseases for Rab3ip

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

Pubmeds

Source