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Spatial pattern gene: Surf6 (spascer ID:20935) |
Gene summary for Surf6 |
 Gene summary |
| Gene information | |
| Species | Mouse | Gene symbol | Surf6 | Gene ID | 20935 |
| Gene name | surfeit gene 6 |
| Synonyms | D2Wsu129e|Surf-6 |
| Cytomap | 2 A3|2 19.08 cM |
| Type of gene | protein-coding |
| Description | surfeit locus protein 6 |
| Modification date | 20220424 |
| UniProtAcc | P70279 |
| Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA). |
| Gene | GO ID | GO term | PubMed ID | Category |
| Surf6 | GO:0003677 | DNA binding | 21873635 | Function |
| Surf6 | GO:0003723 | RNA binding | 21873635 | Function |
| Surf6 | GO:0005730 | nucleolus | 21873635 | Component |
| Surf6 | GO:0042273 | ribosomal large subunit biogenesis | 21873635 | Process |
| Surf6 | GO:0042274 | ribosomal small subunit biogenesis | 21873635 | Process |
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Spatial pattern events for Surf6 |
| spatial pattern gene list. |
| Gene symbol | Species | Tissue | Replication | PMID | Adj p-value |
| Surf6 | Mouse | Kidney | IRI | 34003797 | 2.29e-15 |
| spatial pattern gene map.(click to enlarge the image in a new window) |
| H&E staining (if available) | Singel gene map |
Kidney_IRI_H&E  |  |
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Spatial pattern pathway has Surf6 envolved |
| Symbol | Pathway | Species | Tissue type | Replication | P-value |
| Surf6 | GOBP_Ribonucleoprotein_Complex_Biogenesis | Mouse | Spinal cord | L7CN45_C1 | 1.4e-06 |
| Surf6 | GOBP_Ribosomal_Large_Subunit_Biogenesis | Mouse | Spinal cord | L7CN45_C1 | 5.4e-07 |
| Surf6 | GOBP_Ribosomal_Small_Subunit_Biogenesis | Mouse | Spinal cord | L7CN45_C1 | 1.6e-06 |
| Surf6 | GOBP_Ribosome_Biogenesis | Mouse | Spinal cord | L7CN45_C1 | 1.4e-06 |
| Surf6 | GOBP_Ribonucleoprotein_Complex_Biogenesis | Mouse | Brain | rep_3 | 5.6e-32 |
| Surf6 | GOBP_Ribosomal_Large_Subunit_Biogenesis | Mouse | Brain | rep_3 | 2.0e-16 |
| Surf6 | GOBP_Ribosome_Biogenesis | Mouse | Brain | rep_3 | 1.8e-14 |
| Surf6 | GOBP_Ribosomal_Small_Subunit_Biogenesis | Mouse | Brain | rep_7 | 3.5e-103 |
| Surf6 | GOBP_Ribonucleoprotein_Complex_Biogenesis | Mouse | Embryo | rep_14 | 2.1e-33 |
| Surf6 | GOBP_Ribosomal_Large_Subunit_Biogenesis | Mouse | Embryo | rep_14 | 3.3e-47 |
| Surf6 | GOBP_Ribosomal_Small_Subunit_Biogenesis | Mouse | Embryo | rep_14 | 6.3e-37 |
| Surf6 | GOBP_Ribosome_Biogenesis | Mouse | Embryo | rep_14 | 2.1e-33 |
| Surf6 | GOBP_Ribonucleoprotein_Complex_Biogenesis | Mouse | Kidney | rep_2 | 1.3e-69 |
| Surf6 | GOBP_Ribosomal_Large_Subunit_Biogenesis | Mouse | Kidney | rep_2 | 5.3e-71 |
| Surf6 | GOBP_Ribosomal_Small_Subunit_Biogenesis | Mouse | Kidney | rep_2 | 1.9e-65 |
| Surf6 | GOBP_Ribosome_Biogenesis | Mouse | Kidney | rep_2 | 2.5e-90 |
| Surf6 | GOBP_Ribosomal_Small_Subunit_Biogenesis | Mouse | Liver | rep_16 | 6.6e-13 |
| Surf6 | GOBP_Ribonucleoprotein_Complex_Biogenesis | Mouse | Lymph | MS-1 | 1.7e-07 |
| Surf6 | GOBP_Ribosomal_Small_Subunit_Biogenesis | Mouse | Lymph | MS-1 | 9.9e-07 |
| Surf6 | GOBP_Ribosome_Biogenesis | Mouse | Lymph | MS-1 | 8.8e-09 |
| Surf6 | GOBP_Ribonucleoprotein_Complex_Biogenesis | Mouse | Brain | HP_ad_rep7 | 7.9e-07 |
| Surf6 | GOBP_Ribosomal_Large_Subunit_Biogenesis | Mouse | Brain | HP_ad_rep7 | 7.8e-07 |
| Surf6 | GOBP_Ribosome_Biogenesis | Mouse | Brain | HP_ad_rep7 | 1.6e-08 |
| Surf6 | GOBP_Ribosomal_Small_Subunit_Biogenesis | Mouse | Brain | HP_ad_rep8 | 2.2e-07 |
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Surf6 function as liang/receptor in single cell data |
| Tissue | Source | SourceCell | Target | TargetCell | PMID | Group |
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Surf6 function as liang/receptor across spatial transcriptomics tissue |
| Interactions using deconvoluted spatial data. |
| Ligand | Receptor | LR pair | Tissue | Replication |
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Transcription factor for Surf6 envolved |
| Transcription factor analysis using single cell data. |
| TF | Tissue | Group | Cell types | Target genes | Rss score |
| Motif information. |
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Related Drugs for Surf6 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.9 2022-01-04) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for Surf6 |
| Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | Pubmeds | Source |
