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	Gene summary
	Spatial pattern genes
	Spatial pattern pathway
	Cell cell interactions using single cell data
	Cell-cell/spot-spot interactions using spatial data
	Transcription factors events
	Related drugs with this gene
	Related diseases with this gene

Spatial pattern gene: Sned1 (spascer ID:208777)

Gene summary for Sned1

Gene summary

Gene information
	Species	Mouse
	Gene symbol	Sned1
	Gene ID	208777
	Gene name	sushi, nidogen and EGF-like domains 1
	Synonyms	6720455I24Rik\|AI197264\|AI642697\|D430044C15Rik\|SST3\|Snep
	Cytomap	1\|1 D
	Type of gene	protein-coding
	Description	sushi, nidogen and EGF-like domain-containing protein 1secreted nidogen domain proteinsecreted protein SST-3secreted protein SST3stromal nidogen extracellular matrix protein
	Modification date	20220424
	UniProtAcc	Q70E20

Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).

Gene	GO ID	GO term	PubMed ID	Category
Sned1	GO:0005112	Notch binding	21873635	Function

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Spatial pattern events for Sned1

spatial pattern gene list.

Gene symbol	Species	Tissue	Replication	PMID	Adj p-value
Sned1	Mouse	Brain	S1	34413515	9.47e-06
Sned1	Mouse	Brain	S3	34413515	1.64e-15
Sned1	Mouse	Brain	S4	34413515	1.37e-15
Sned1	Mouse	Brain	S6	34413515	1.46e-15
Sned1	Mouse	Brain	24A	32637622	3.19e-06
Sned1	Mouse	Brain	36B	32637622	3.00e-07
Sned1	Mouse	Embryo	rep_4	33188776	8.29e-15
Sned1	Mouse	Embryo	rep_5	33188776	3.86e-14
Sned1	Mouse	Kidney	CLP	34003797	2.19e-15
Sned1	Mouse	Kidney	IRI	34003797	2.29e-15
Sned1	Mouse	Kidney	Sham	34003797	2.58e-15
Sned1	Mouse	Kidney	rep_1	34853151	2.42e-15
Sned1	Mouse	Kidney	rep_5	34853151	3.18e-15
Sned1	Mouse	Brain	rep_1	33469025	1.30e-15
Sned1	Mouse	Testicle	rep_3	34731600	1.20e-12

spatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)	Singel gene map
Kidney_CLP_H&E
Kidney_IRI_H&E
Kidney_Sham_H&E
Kidney_rep_1_H&E
Kidney_rep_5_H&E
Brain_rep_1_H&E

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Spatial pattern pathway has Sned1 envolved

Symbol	Pathway	Species	Tissue type	Replication	P-value
Sned1	GOBP_Biological_Adhesion	Mouse	Spinal cord	L7CN45_C1	2.4e-08
Sned1	GOBP_Cell_Substrate_Adhesion	Mouse	Spinal cord	L7CN97_E2	2.2e-06
Sned1	GOBP_Biological_Adhesion	Mouse	Brain	rep_3	4.3e-106
Sned1	GOBP_Cell_Substrate_Adhesion	Mouse	Brain	rep_3	1.8e-27
Sned1	GOBP_Biological_Adhesion	Mouse	Embryo	rep_1	2.2e-19
Sned1	GOBP_Cell_Matrix_Adhesion	Mouse	Embryo	rep_1	1.6e-47
Sned1	GOBP_Cell_Substrate_Adhesion	Mouse	Embryo	rep_1	2.0e-34
Sned1	GOBP_Biological_Adhesion	Mouse	Kidney	rep_2	1.3e-48
Sned1	GOBP_Cell_Matrix_Adhesion	Mouse	Kidney	rep_2	2.0e-31
Sned1	GOBP_Cell_Substrate_Adhesion	Mouse	Kidney	rep_2	4.0e-46
Sned1	GOBP_Biological_Adhesion	Mouse	Liver	rep_16	2.1e-07
Sned1	GOBP_Cell_Matrix_Adhesion	Mouse	Liver	rep_16	2.7e-08
Sned1	GOBP_Biological_Adhesion	Mouse	Lymph	MS-1	8.0e-14
Sned1	GOBP_Cell_Matrix_Adhesion	Mouse	Lymph	MS-1	3.5e-08
Sned1	GOBP_Biological_Adhesion	Mouse	Lung	rep_1	3.0e-22
Sned1	GOBP_Cell_Matrix_Adhesion	Mouse	Brain	rep_4	7.1e-07
Sned1	GOBP_Cell_Matrix_Adhesion	Mouse	Brain	HP_ad_rep7	5.6e-10
Sned1	GOBP_Biological_Adhesion	Mouse	Brain	HP_polb_rep9	1.5e-07
Sned1	GOBP_Cell_Substrate_Adhesion	Mouse	Brain	HP_polb_rep9	3.3e-07

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Sned1 function as liang/receptor in single cell data

Tissue

Source

SourceCell

Target

TargetCell

PMID

Group

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Sned1 function as liang/receptor across spatial transcriptomics tissue

Interactions using deconvoluted spatial data.

Ligand

Receptor

LR pair

Tissue

Replication

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Transcription factor for Sned1 envolved

Transcription factor analysis using single cell data.

Tissue

Group

Cell types

Target genes

Rss score

Motif information.

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Related Drugs for Sned1

Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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Related Diseases for Sned1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

Pubmeds

Source