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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

Spatial pattern genes

Soverview

Spatial pattern pathway

Soverview

Cell cell interactions using single cell data

Soverview

Cell-cell/spot-spot interactions using spatial data

Soverview

Transcription factors events

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Spatial pattern gene: Ssr4 (spascer ID:20832)

Gene summary for Ssr4

check button Gene summary
Gene information
SpeciesMouse
Gene symbol

Ssr4

Gene ID

20832

Gene namesignal sequence receptor, delta
SynonymsAW743063|C78062|SSR-delta|TRAP-delta|Trap
CytomapX A7.3|X 37.41 cM
Type of geneprotein-coding
Descriptiontranslocon-associated protein subunit deltasignal sequence receptor subunit delta
Modification date20220424
UniProtAcc

Q62186


check button Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).
GeneGO IDGO termPubMed IDCategory
Ssr4

GO:0012505

endomembrane system

21873635

Component

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Spatial pattern events for Ssr4

check buttonspatial pattern gene list.
Gene symbolSpeciesTissueReplicationPMIDAdj p-value
Ssr4MouseBrainS1 344135157.10e-15
Ssr4MouseBrainS2 344135158.26e-09
Ssr4MouseBrainS3 344135151.64e-15
Ssr4MouseBrainS4 344135151.37e-15
Ssr4MouseBrainS6 344135151.46e-15
Ssr4MouseBrainS7 344135151.55e-15
Ssr4MouseBrainrep_1 351413742.02e-15
Ssr4MouseBrainrep_2 351413741.69e-15
Ssr4MouseBrainrep_3 351413741.64e-15
Ssr4MouseBrainrep_4 351413741.57e-15
Ssr4MouseBrainrep_5 351413741.47e-15
Ssr4MouseBrainrep_6 351413741.73e-15
Ssr4MouseEmbryorep_13 331887761.85e-11
Ssr4MouseKidneyCLP 340037973.77e-15
Ssr4MouseKidneySham 340037972.58e-15
Ssr4MouseKidneyrep_1 348531514.97e-14
Ssr4MouseKidneyrep_5 348531511.02e-14
Ssr4MouseBrainrep_1 334690251.30e-15
Ssr4MouseLiverrep_22 350210639.46e-07
Ssr4MouseLiverrep_23 350210633.10e-09
Ssr4MouseBrainrep_1 350277292.22e-14
Ssr4MouseBrainrep_3 350277292.38e-15
Ssr4MouseBrainrep_4 350277292.36e-13
Ssr4MouseBrainrep_5 350277291.46e-15
Ssr4MouseIntestinerep_2 351497214.12e-07
Ssr4MouseIntestinerep_3 351497215.21e-15
Ssr4MouseIntestinerep_4 351497212.30e-15
Ssr4MouseLymphA1 01.35e-09
Ssr4MouseLymphB1 02.76e-14
Ssr4MouseLungrep_1 352908014.52e-15
Ssr4MouseLungrep_2 352908017.23e-15
Ssr4MouseLungrep_4 352908013.99e-14
Ssr4MouseBrainrep_1 352106241.74e-15
Ssr4MouseBrainrep_2 352106241.74e-15
Ssr4MouseBrainrep_3 352106241.82e-15
Ssr4MouseBrainrep_5 352106244.27e-07
Ssr4MouseBrainrep_6 352106241.04e-10
Ssr4MouseBrainrep_7 352106241.87e-15

check buttonspatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)Singel gene map
Brain_rep_1_H&E
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Brain_rep_2_H&E
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Brain_rep_3_H&E
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Brain_rep_4_H&E
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Brain_rep_5_H&E
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Brain_rep_6_H&E
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Kidney_CLP_H&E
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Kidney_Sham_H&E
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Kidney_rep_1_H&E
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Kidney_rep_5_H&E
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Brain_rep_1_H&E
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Liver_rep_22_H&E
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Liver_rep_23_H&E
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Brain_rep_1_H&E
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Brain_rep_3_H&E
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Brain_rep_4_H&E
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Brain_rep_5_H&E
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Lung_rep_1_H&E
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Lung_rep_2_H&E
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Lung_rep_4_H&E
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Spatial pattern pathway has Ssr4 envolved


SymbolPathwaySpeciesTissue typeReplicationP-value

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Ssr4 function as liang/receptor in single cell data

TissueSourceSourceCellTargetTargetCellPMIDGroup

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Ssr4 function as liang/receptor across spatial transcriptomics tissue

check button Interactions using deconvoluted spatial data.

LigandReceptor LR pairTissueReplication

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Transcription factor for Ssr4 envolved

check buttonTranscription factor analysis using single cell data.
TFTissueGroupCell typesTarget genesRss score

check button Motif information.

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Related Drugs for Ssr4

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for Ssr4

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease namePubmedsSource
Ssr4C4012395Congenital disorder of glycosylation type 1y2CTD_human;GENOMICS_ENGLAND;ORPHANET